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The map label for this gene is yqfA [C]

Identifier: 213692642

GI number: 213692642

Start: 1951784

End: 1952728

Strand: Direct

Name: yqfA [C]

Synonym: Blon_1775

Alternate gene names: 213692642

Gene position: 1951784-1952728 (Clockwise)

Preceding gene: 213692640

Following gene: 213692652

Centisome position: 68.9

GC content: 61.69

Gene sequence:

>945_bases
ATGGCATCAGCGGATGACGACGCAACGGCAACGATGCGCCATGACACTCGCGACGATTCGACGGCCACGCCGGACGCCGC
CATCGAATCCAAGCGCCAGGCGGCCGAGCAGGCGCTCGAACAGGCGACGCGGGCCAAGGCGGATACGATACGGGCCAAAG
CCCGGTTCAAGGCCGCGTCCATACGGGCCGCAGCCGAGGAGCGCGCCCGACGCACGCTCGCCAAAGCGGAGAACCGTGCG
CTGAAAATCGAGGGCATTGCCCCTGCGGAAGTGGAACGCAGGATTCGTCTCGACGTGCACGGACGGCCAAAGCCGTTGAT
GCGCGGCTGGATTCACGCGATTGCCGCTCCCCTGTCATTGGCGGCAGGCATCGTGCTTATATGCCTGGCACATGGCGCGA
GTCTGAAGTGGGCGTGTGCCGTGTTCATGACAGCGTCTCTGATTCTGTTCACCAATTCGGCCTGCTACCATCTGGGCGAT
TGGAGCCCGCGCGTCACCGATGTGCTGCGGCGTATCGATCATGTCAACATCTTCCTGCTCATTGCCGGCACGTATACCCC
GGTCTCGTTTGCACTGGAACCGTTCTGGCGCAATGTGATCATCATATCGATGTGGGCGTGCACGGCCATCGCCATCGTGA
TTCACGTGATCTGGATCAACGCGCCACGCTGGTTGTATACGGTGGTGTACATCATCTTCGGCATCTACGGCCTGGCCTAT
ATGGTGCTGTTCTGGAAGTCGCCGTATGCGGGGCCAGCCGTGGTGGCGCTGCTGTGCGCCGGCGGCGTCTGCTACATCCT
CGGCGCCATCGTCTACGCCTTGCGCAAGCCCGACCCTTGGCCTCGCGTCTTCGGCTTCCATGAGATTTTCCACTGCGGAA
CGGTGGCCGGATATGCCTGCCATATGGTGGCCATCTACATGGTGATCATCTCACTGTGGCATTGA

Upstream 100 bases:

>100_bases
ACATCGGCGTCCGCATCGTTGACCAGCATAGATGTTACGCTGACGTAGGTTACGGCAGCGTAAGCAACGTATCGCCAACT
CGTGAAACGGGGGAACCATC

Downstream 100 bases:

>100_bases
CGTCTCCAGGCCCGGCGACGGTGCCGGGCCAACGAACGGGGAGGGGTTCCGGAATCGTCCGGAACCCCTCCCTCGCGTTG
AGACGACGTCAGGCCAGCGG

Product: Hly-III family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 313

Protein sequence:

>314_residues
MASADDDATATMRHDTRDDSTATPDAAIESKRQAAEQALEQATRAKADTIRAKARFKAASIRAAAEERARRTLAKAENRA
LKIEGIAPAEVERRIRLDVHGRPKPLMRGWIHAIAAPLSLAAGIVLICLAHGASLKWACAVFMTASLILFTNSACYHLGD
WSPRVTDVLRRIDHVNIFLLIAGTYTPVSFALEPFWRNVIIISMWACTAIAIVIHVIWINAPRWLYTVVYIIFGIYGLAY
MVLFWKSPYAGPAVVALLCAGGVCYILGAIVYALRKPDPWPRVFGFHEIFHCGTVAGYACHMVAIYMVIISLWH

Sequences:

>Translated_314_residues
MASADDDATATMRHDTRDDSTATPDAAIESKRQAAEQALEQATRAKADTIRAKARFKAASIRAAAEERARRTLAKAENRA
LKIEGIAPAEVERRIRLDVHGRPKPLMRGWIHAIAAPLSLAAGIVLICLAHGASLKWACAVFMTASLILFTNSACYHLGD
WSPRVTDVLRRIDHVNIFLLIAGTYTPVSFALEPFWRNVIIISMWACTAIAIVIHVIWINAPRWLYTVVYIIFGIYGLAY
MVLFWKSPYAGPAVVALLCAGGVCYILGAIVYALRKPDPWPRVFGFHEIFHCGTVAGYACHMVAIYMVIISLWH
>Mature_313_residues
ASADDDATATMRHDTRDDSTATPDAAIESKRQAAEQALEQATRAKADTIRAKARFKAASIRAAAEERARRTLAKAENRAL
KIEGIAPAEVERRIRLDVHGRPKPLMRGWIHAIAAPLSLAAGIVLICLAHGASLKWACAVFMTASLILFTNSACYHLGDW
SPRVTDVLRRIDHVNIFLLIAGTYTPVSFALEPFWRNVIIISMWACTAIAIVIHVIWINAPRWLYTVVYIIFGIYGLAYM
VLFWKSPYAGPAVVALLCAGGVCYILGAIVYALRKPDPWPRVFGFHEIFHCGTVAGYACHMVAIYMVIISLWH

Specific function: Unknown

COG id: COG1272

COG function: function code R; Predicted membrane protein, hemolysin III homolog

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0073 (Hly-III) family [H]

Homologues:

Organism=Escherichia coli, GI1789266, Length=174, Percent_Identity=31.0344827586207, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004254
- InterPro:   IPR005744 [H]

Pfam domain/function: PF03006 HlyIII [H]

EC number: NA

Molecular weight: Translated: 34730; Mature: 34599

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASADDDATATMRHDTRDDSTATPDAAIESKRQAAEQALEQATRAKADTIRAKARFKAAS
CCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRAAAEERARRTLAKAENRALKIEGIAPAEVERRIRLDVHGRPKPLMRGWIHAIAAPLSL
HHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHH
AAGIVLICLAHGASLKWACAVFMTASLILFTNSACYHLGDWSPRVTDVLRRIDHVNIFLL
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHCCCEEEEE
IAGTYTPVSFALEPFWRNVIIISMWACTAIAIVIHVIWINAPRWLYTVVYIIFGIYGLAY
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
MVLFWKSPYAGPAVVALLCAGGVCYILGAIVYALRKPDPWPRVFGFHEIFHCGTVAGYAC
HHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
HMVAIYMVIISLWH
HHHHHHHHHHHHCC
>Mature Secondary Structure 
ASADDDATATMRHDTRDDSTATPDAAIESKRQAAEQALEQATRAKADTIRAKARFKAAS
CCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRAAAEERARRTLAKAENRALKIEGIAPAEVERRIRLDVHGRPKPLMRGWIHAIAAPLSL
HHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHH
AAGIVLICLAHGASLKWACAVFMTASLILFTNSACYHLGDWSPRVTDVLRRIDHVNIFLL
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHCCCEEEEE
IAGTYTPVSFALEPFWRNVIIISMWACTAIAIVIHVIWINAPRWLYTVVYIIFGIYGLAY
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
MVLFWKSPYAGPAVVALLCAGGVCYILGAIVYALRKPDPWPRVFGFHEIFHCGTVAGYAC
HHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
HMVAIYMVIISLWH
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]