| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692640
Identifier: 213692640
GI number: 213692640
Start: 1949783
End: 1950061
Strand: Direct
Name: 213692640
Synonym: Blon_1773
Alternate gene names: NA
Gene position: 1949783-1950061 (Clockwise)
Preceding gene: 213692639
Following gene: 213692642
Centisome position: 68.83
GC content: 61.29
Gene sequence:
>279_bases ATGAGCAGCGCTTTTGATTGGCGAGCCAAGGCCGCATGTCGCGACAAGGATCCGGAACTCTTCTTCCCGGTGGGCAACAC CGGTGCAGCTTATCAGCAGATTGAGGAGGCCAAGGCCGTGTGCCGCACCTGCAAGGTGATTGACGCATGCCTGAAGTGCG CACTGGACACCAATCAGGATTACGGCGTGTGGGGCGGCTTGAGCGAAGACGAGCGTCGTGCGCTGAAGCGCCGCGCCATG CGCGCCCGCCGTTCTCAGGCCATGCAGATGCAAATCTGA
Upstream 100 bases:
>100_bases TTCTCGGCGAAACCTCTTGAAAATCACCACGGTTCGTGGTTACCTTGGTACTGGACTTAAGGAACAACACCAGTCACGGG GCTTTTAAGGGAGGCAAGCA
Downstream 100 bases:
>100_bases TGTTTTGATTATTTCTTCGTTATACTAGGAAACCCTCCCACTCGGGAGGGTTTCCTCATTTCGGGCTTCTCGTCACTCGT CCTGAGCAGCCCTGAGCTTC
Product: transcription factor WhiB
Products: NA
Alternate protein names: WhiB Family Transcriptional Regulator; Regulatory Protein; WhiB Family Transcription Factor; WhiB-Family Transcriptional Regulator; Transcription Factor WhiB Family; Transcriptional Regulator; WhiB Family Regulatory Protein; Transcription Factor; WhiB Family Cell Cycle Control Transcriptional Regulator; Transcriptional Regulator WhiB; WhiB-Type Transcription Regulator; Transcription Regulatory Protein; WhiB Transcriptional Regulator; WhiB Family Transcription Regulator
Number of amino acids: Translated: 92; Mature: 91
Protein sequence:
>92_residues MSSAFDWRAKAACRDKDPELFFPVGNTGAAYQQIEEAKAVCRTCKVIDACLKCALDTNQDYGVWGGLSEDERRALKRRAM RARRSQAMQMQI
Sequences:
>Translated_92_residues MSSAFDWRAKAACRDKDPELFFPVGNTGAAYQQIEEAKAVCRTCKVIDACLKCALDTNQDYGVWGGLSEDERRALKRRAM RARRSQAMQMQI >Mature_91_residues SSAFDWRAKAACRDKDPELFFPVGNTGAAYQQIEEAKAVCRTCKVIDACLKCALDTNQDYGVWGGLSEDERRALKRRAMR ARRSQAMQMQI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10406; Mature: 10275
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.4 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 9.8 %Cys+Met (Translated Protein) 5.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 8.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSAFDWRAKAACRDKDPELFFPVGNTGAAYQQIEEAKAVCRTCKVIDACLKCALDTNQD CCCCCCCHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC YGVWGGLSEDERRALKRRAMRARRSQAMQMQI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SSAFDWRAKAACRDKDPELFFPVGNTGAAYQQIEEAKAVCRTCKVIDACLKCALDTNQD CCCCCCHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC YGVWGGLSEDERRALKRRAMRARRSQAMQMQI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA