| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
Click here to switch to the map view.
The map label for this gene is 213692637
Identifier: 213692637
GI number: 213692637
Start: 1945690
End: 1945989
Strand: Reverse
Name: 213692637
Synonym: Blon_1770
Alternate gene names: NA
Gene position: 1945989-1945690 (Counterclockwise)
Preceding gene: 213692641
Following gene: 213692636
Centisome position: 68.7
GC content: 57.33
Gene sequence:
>300_bases ATGTGGGGTGTGGTCGACGATTCAGCCGAAGAGCCATGGCATGAATTGTGGGGACTATTCCGACCTGATGGCGATGTATC TTGGCAGCACAAGGCGTTGTGCGCGCAAACCGATCCGGAGGCGTTCTTCCCGGAAAAGGGAGGCTCGACCCGTGATGCCA AACGTGTGTGCGCAAAATGCGAAGTGCGTGAGCAATGCCTGAAATGGGCCATCGATCATGATGAGCGGTTCGGTATTTGG GGTGGCATGAGCGAGCGCGAACGTCGCCGATATAAGCGAGAGCACCGAGAGCAGGCGTAG
Upstream 100 bases:
>100_bases ATAAAAATGATGTAATGACACGAGAAAGAATTTGACAAAACCGAAATTGCATGTGTGTAATTTAGTCCGTATGAAAAGCT CAATAGGCAAGGAGAATCGC
Downstream 100 bases:
>100_bases TTCCACACACCCCCTTCAAGTCTGGTGCGTACACTGGGAATTTATGAGTCCGACAGGTAATAGCGATATTCATGAGGCGT TGGCTGACGCCATGTCTTCT
Product: transcription factor WhiB
Products: NA
Alternate protein names: WhiB Family Transcriptional Regulator; WhiB-Family Transcriptional Regulator; Transcriptional Regulator; Transcription Factor WhiB Family Protein; Regulatory Protein; Transcriptional Regulatory; Transcription Factor; Transcriptional Regulator WhiB; WhiB Family Regulatory Protein; WhiB-Type Transcription Regulator; Sporulation Regulatory Protein; Whib-Like Transcriptional Regulator; Transcription Regulator; Regulatory Protein WhiB; WhiB Transcriptional Regulator
Number of amino acids: Translated: 99; Mature: 99
Protein sequence:
>99_residues MWGVVDDSAEEPWHELWGLFRPDGDVSWQHKALCAQTDPEAFFPEKGGSTRDAKRVCAKCEVREQCLKWAIDHDERFGIW GGMSERERRRYKREHREQA
Sequences:
>Translated_99_residues MWGVVDDSAEEPWHELWGLFRPDGDVSWQHKALCAQTDPEAFFPEKGGSTRDAKRVCAKCEVREQCLKWAIDHDERFGIW GGMSERERRRYKREHREQA >Mature_99_residues MWGVVDDSAEEPWHELWGLFRPDGDVSWQHKALCAQTDPEAFFPEKGGSTRDAKRVCAKCEVREQCLKWAIDHDERFGIW GGMSERERRRYKREHREQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11719; Mature: 11719
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWGVVDDSAEEPWHELWGLFRPDGDVSWQHKALCAQTDPEAFFPEKGGSTRDAKRVCAKC CCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH EVREQCLKWAIDHDERFGIWGGMSERERRRYKREHREQA HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MWGVVDDSAEEPWHELWGLFRPDGDVSWQHKALCAQTDPEAFFPEKGGSTRDAKRVCAKC CCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH EVREQCLKWAIDHDERFGIWGGMSERERRRYKREHREQA HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA