Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is 213692637

Identifier: 213692637

GI number: 213692637

Start: 1945690

End: 1945989

Strand: Reverse

Name: 213692637

Synonym: Blon_1770

Alternate gene names: NA

Gene position: 1945989-1945690 (Counterclockwise)

Preceding gene: 213692641

Following gene: 213692636

Centisome position: 68.7

GC content: 57.33

Gene sequence:

>300_bases
ATGTGGGGTGTGGTCGACGATTCAGCCGAAGAGCCATGGCATGAATTGTGGGGACTATTCCGACCTGATGGCGATGTATC
TTGGCAGCACAAGGCGTTGTGCGCGCAAACCGATCCGGAGGCGTTCTTCCCGGAAAAGGGAGGCTCGACCCGTGATGCCA
AACGTGTGTGCGCAAAATGCGAAGTGCGTGAGCAATGCCTGAAATGGGCCATCGATCATGATGAGCGGTTCGGTATTTGG
GGTGGCATGAGCGAGCGCGAACGTCGCCGATATAAGCGAGAGCACCGAGAGCAGGCGTAG

Upstream 100 bases:

>100_bases
ATAAAAATGATGTAATGACACGAGAAAGAATTTGACAAAACCGAAATTGCATGTGTGTAATTTAGTCCGTATGAAAAGCT
CAATAGGCAAGGAGAATCGC

Downstream 100 bases:

>100_bases
TTCCACACACCCCCTTCAAGTCTGGTGCGTACACTGGGAATTTATGAGTCCGACAGGTAATAGCGATATTCATGAGGCGT
TGGCTGACGCCATGTCTTCT

Product: transcription factor WhiB

Products: NA

Alternate protein names: WhiB Family Transcriptional Regulator; WhiB-Family Transcriptional Regulator; Transcriptional Regulator; Transcription Factor WhiB Family Protein; Regulatory Protein; Transcriptional Regulatory; Transcription Factor; Transcriptional Regulator WhiB; WhiB Family Regulatory Protein; WhiB-Type Transcription Regulator; Sporulation Regulatory Protein; Whib-Like Transcriptional Regulator; Transcription Regulator; Regulatory Protein WhiB; WhiB Transcriptional Regulator

Number of amino acids: Translated: 99; Mature: 99

Protein sequence:

>99_residues
MWGVVDDSAEEPWHELWGLFRPDGDVSWQHKALCAQTDPEAFFPEKGGSTRDAKRVCAKCEVREQCLKWAIDHDERFGIW
GGMSERERRRYKREHREQA

Sequences:

>Translated_99_residues
MWGVVDDSAEEPWHELWGLFRPDGDVSWQHKALCAQTDPEAFFPEKGGSTRDAKRVCAKCEVREQCLKWAIDHDERFGIW
GGMSERERRRYKREHREQA
>Mature_99_residues
MWGVVDDSAEEPWHELWGLFRPDGDVSWQHKALCAQTDPEAFFPEKGGSTRDAKRVCAKCEVREQCLKWAIDHDERFGIW
GGMSERERRRYKREHREQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11719; Mature: 11719

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWGVVDDSAEEPWHELWGLFRPDGDVSWQHKALCAQTDPEAFFPEKGGSTRDAKRVCAKC
CCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH
EVREQCLKWAIDHDERFGIWGGMSERERRRYKREHREQA
HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MWGVVDDSAEEPWHELWGLFRPDGDVSWQHKALCAQTDPEAFFPEKGGSTRDAKRVCAKC
CCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH
EVREQCLKWAIDHDERFGIWGGMSERERRRYKREHREQA
HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA