Click here to switch to the map view.

The map label for this gene is pdtaS [H]

Identifier: 213692641

GI number: 213692641

Start: 1950203

End: 1951699

Strand: Reverse

Name: pdtaS [H]

Synonym: Blon_1774

Alternate gene names: 213692641

Gene position: 1951699-1950203 (Counterclockwise)

Preceding gene: 213692643

Following gene: 213692637

Centisome position: 68.9

GC content: 59.25

Gene sequence:

>1497_bases
ATGCGGACGCCGATGTGGACACCGCGCTTCTTCCTCGCCGTCGGGCGATGCGACGTCGCATCTGCGTATGATAGGGATAT
GGCTGATTTTTCACATATCCTTGCAACGCGCCCCGACTTCGACGACGAGGACCGCGAGTGGCTGCATCATCTTGTCGCCG
ATTGGCAGGTGATCGCCGATTTGAGCTTCGCCGATCTACTGCTGCTGGTACAGAATGGCGATGGTAAATACGTGGTGGCC
GAGCAATGCCGTCCATCCACCGTGATGACGCTGCGGGCGGAAGACGTGGTGGGAAACGTCATGCCGGACGACATGGTCGG
CGAATTGGACGCCGCCATGCTCTCCAGCGTGGTGTTCCGCTCCACGGTATTGAGAACCGTGGGCAAGTCGACCGTCTGCA
ACGTGTACGCGCCGGTTCGGCACAATGGCAAGACCTTGGGCTTGGTCGTGCGTGAGACCAATATGGCCACACGAGAATCC
AACGGCCGATATGAGTCGGAAAGCATCAATGCCGGCAAGCAGCTGTACGAGATGATTCCGCGAGGCCAATTCCCCTACAA
GGATTCGGTGATGAGCCAACGCCATATCGCTCGCGTGGCGGACGGCTTCATCATCCTGACCATGGACGGCGTGGTTCGAT
ACGCAGCCCCGAACGCCATCAGCTGCTTTAGGCGTCTCGGTCTGCTGACCACCATGCCTGGCCATTACCTCAGCGAACTT
GGCACACAGCTGCTGAAGGAGAACGACCCCGTTCCGGAAACCCTGCCGTTGGTGCTGACCGGCAAGGCCGCGGTGGACTC
CGAACTTGACGCCAACCGTTCCGCCGTTTCGATGCGCTCGCTGCCCTTGTATGACAACAACGGCCGTATCGGAGCGATTC
TGCTATGCCGTGACGTCACCGAGCTACGCCGCCGAGAGCAGGAGCTGCAGACCAAGGACGCCACGATTTCCGAGATTCAC
CATCGTGTCAAGAACAACCTGCAGGCCGTCTCTGCGCTACTGAGGCTTCAGGCTCGTAAGACCAAGTCGGATGAGGTCAA
GAAGGAATTGCAGGAGGCGCAACGCCGCGTGCAGACCATCGCCATGGTGCATGAGGGATTGAGCCAGACCGCCGACGAAG
TCGTCGACTTCGACAAGGTAATCGCCAACCTGCTGCGCATGGCCGTGGACTTGGCCACGATGAAAGACCAGCATATCGAT
ATCAACTACATGGGCAAGTTCGGCATGATGCCCGCTCAGGATGCCACGCCGCTGTCCCTCGTGCTGACCGAGCTCATCAC
CAATTCGGTGGAGCATGGGTTCGAAGGCCGCAAGGATGGCCATATCACGATTTCCGTGGGCCGCTCCGGCCCGAACCTCA
ATGTGGTGGTCGAGGACGACGGTTCCGGTCTCGGCTCCGAAGAGCAGGGTGGATTGGCTCGTTCTTCCGGTTCCGGTTTG
GGCACGCAGATCATCAACACCTTCGTGACCAATGATTTCGGTGGTTCCGTGCATTGA

Upstream 100 bases:

>100_bases
CATCCGCTGATGCCATGATGGTTCCCCCGTTTCACGAGTTGGCGATACGTTGCTTACGCTGCCGTAACCTACGTCAGCGT
AACATCTATGCTGGTCAACG

Downstream 100 bases:

>100_bases
GAGCCGCGCCGCGAAGGCGGCACCCGTGTGGTGCTCGATATGAAGCTCAGGGCTGCTCAGGACGAGTGACGAGAAGCCCG
AAATGAGGAAACCCTCCCGA

Product: signal transduction histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 498; Mature: 498

Protein sequence:

>498_residues
MRTPMWTPRFFLAVGRCDVASAYDRDMADFSHILATRPDFDDEDREWLHHLVADWQVIADLSFADLLLLVQNGDGKYVVA
EQCRPSTVMTLRAEDVVGNVMPDDMVGELDAAMLSSVVFRSTVLRTVGKSTVCNVYAPVRHNGKTLGLVVRETNMATRES
NGRYESESINAGKQLYEMIPRGQFPYKDSVMSQRHIARVADGFIILTMDGVVRYAAPNAISCFRRLGLLTTMPGHYLSEL
GTQLLKENDPVPETLPLVLTGKAAVDSELDANRSAVSMRSLPLYDNNGRIGAILLCRDVTELRRREQELQTKDATISEIH
HRVKNNLQAVSALLRLQARKTKSDEVKKELQEAQRRVQTIAMVHEGLSQTADEVVDFDKVIANLLRMAVDLATMKDQHID
INYMGKFGMMPAQDATPLSLVLTELITNSVEHGFEGRKDGHITISVGRSGPNLNVVVEDDGSGLGSEEQGGLARSSGSGL
GTQIINTFVTNDFGGSVH

Sequences:

>Translated_498_residues
MRTPMWTPRFFLAVGRCDVASAYDRDMADFSHILATRPDFDDEDREWLHHLVADWQVIADLSFADLLLLVQNGDGKYVVA
EQCRPSTVMTLRAEDVVGNVMPDDMVGELDAAMLSSVVFRSTVLRTVGKSTVCNVYAPVRHNGKTLGLVVRETNMATRES
NGRYESESINAGKQLYEMIPRGQFPYKDSVMSQRHIARVADGFIILTMDGVVRYAAPNAISCFRRLGLLTTMPGHYLSEL
GTQLLKENDPVPETLPLVLTGKAAVDSELDANRSAVSMRSLPLYDNNGRIGAILLCRDVTELRRREQELQTKDATISEIH
HRVKNNLQAVSALLRLQARKTKSDEVKKELQEAQRRVQTIAMVHEGLSQTADEVVDFDKVIANLLRMAVDLATMKDQHID
INYMGKFGMMPAQDATPLSLVLTELITNSVEHGFEGRKDGHITISVGRSGPNLNVVVEDDGSGLGSEEQGGLARSSGSGL
GTQIINTFVTNDFGGSVH
>Mature_498_residues
MRTPMWTPRFFLAVGRCDVASAYDRDMADFSHILATRPDFDDEDREWLHHLVADWQVIADLSFADLLLLVQNGDGKYVVA
EQCRPSTVMTLRAEDVVGNVMPDDMVGELDAAMLSSVVFRSTVLRTVGKSTVCNVYAPVRHNGKTLGLVVRETNMATRES
NGRYESESINAGKQLYEMIPRGQFPYKDSVMSQRHIARVADGFIILTMDGVVRYAAPNAISCFRRLGLLTTMPGHYLSEL
GTQLLKENDPVPETLPLVLTGKAAVDSELDANRSAVSMRSLPLYDNNGRIGAILLCRDVTELRRREQELQTKDATISEIH
HRVKNNLQAVSALLRLQARKTKSDEVKKELQEAQRRVQTIAMVHEGLSQTADEVVDFDKVIANLLRMAVDLATMKDQHID
INYMGKFGMMPAQDATPLSLVLTELITNSVEHGFEGRKDGHITISVGRSGPNLNVVVEDDGSGLGSEEQGGLARSSGSGL
GTQIINTFVTNDFGGSVH

Specific function: Member of the two-component regulatory system pdtaR/pdtaS. Autophosphorylates, probably on a histidine residue, and transfers its phosphate group to pdtaR [H]

COG id: COG3920

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR022066
- InterPro:   IPR011495
- InterPro:   IPR005467 [H]

Pfam domain/function: PF12282 H_kinase_N; PF02518 HATPase_c; PF07568 HisKA_2 [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 54973; Mature: 54973

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTPMWTPRFFLAVGRCDVASAYDRDMADFSHILATRPDFDDEDREWLHHLVADWQVIAD
CCCCCCCCHHHHEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHC
LSFADLLLLVQNGDGKYVVAEQCRPSTVMTLRAEDVVGNVMPDDMVGELDAAMLSSVVFR
CCHHHEEEEEECCCCCEEEECCCCCCEEEEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHH
STVLRTVGKSTVCNVYAPVRHNGKTLGLVVRETNMATRESNGRYESESINAGKQLYEMIP
HHHHHHHCCCCEEEEEECCCCCCCEEEEEEEECCCHHCCCCCCCCHHHHHHHHHHHHHCC
RGQFPYKDSVMSQRHIARVADGFIILTMDGVVRYAAPNAISCFRRLGLLTTMPGHYLSEL
CCCCCCHHHHHHHHHHHHHHCCEEEEEECCCHHHCCCCHHHHHHHHHHHHCCCHHHHHHH
GTQLLKENDPVPETLPLVLTGKAAVDSELDANRSAVSMRSLPLYDNNGRIGAILLCRDVT
HHHHHHCCCCCCCCCCEEEECCHHHCCCCCCCCHHHHHCCCCEECCCCCEEEEEEEHHHH
ELRRREQELQTKDATISEIHHRVKNNLQAVSALLRLQARKTKSDEVKKELQEAQRRVQTI
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
AMVHEGLSQTADEVVDFDKVIANLLRMAVDLATMKDQHIDINYMGKFGMMPAQDATPLSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHH
VLTELITNSVEHGFEGRKDGHITISVGRSGPNLNVVVEDDGSGLGSEEQGGLARSSGSGL
HHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCH
GTQIINTFVTNDFGGSVH
HHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MRTPMWTPRFFLAVGRCDVASAYDRDMADFSHILATRPDFDDEDREWLHHLVADWQVIAD
CCCCCCCCHHHHEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHC
LSFADLLLLVQNGDGKYVVAEQCRPSTVMTLRAEDVVGNVMPDDMVGELDAAMLSSVVFR
CCHHHEEEEEECCCCCEEEECCCCCCEEEEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHH
STVLRTVGKSTVCNVYAPVRHNGKTLGLVVRETNMATRESNGRYESESINAGKQLYEMIP
HHHHHHHCCCCEEEEEECCCCCCCEEEEEEEECCCHHCCCCCCCCHHHHHHHHHHHHHCC
RGQFPYKDSVMSQRHIARVADGFIILTMDGVVRYAAPNAISCFRRLGLLTTMPGHYLSEL
CCCCCCHHHHHHHHHHHHHHCCEEEEEECCCHHHCCCCHHHHHHHHHHHHCCCHHHHHHH
GTQLLKENDPVPETLPLVLTGKAAVDSELDANRSAVSMRSLPLYDNNGRIGAILLCRDVT
HHHHHHCCCCCCCCCCEEEECCHHHCCCCCCCCHHHHHCCCCEECCCCCEEEEEEEHHHH
ELRRREQELQTKDATISEIHHRVKNNLQAVSALLRLQARKTKSDEVKKELQEAQRRVQTI
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
AMVHEGLSQTADEVVDFDKVIANLLRMAVDLATMKDQHIDINYMGKFGMMPAQDATPLSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHH
VLTELITNSVEHGFEGRKDGHITISVGRSGPNLNVVVEDDGSGLGSEEQGGLARSSGSGL
HHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCH
GTQIINTFVTNDFGGSVH
HHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]