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The map label for this gene is glgB [H]

Identifier: 213692628

GI number: 213692628

Start: 1934402

End: 1936654

Strand: Direct

Name: glgB [H]

Synonym: Blon_1761

Alternate gene names: 213692628

Gene position: 1934402-1936654 (Clockwise)

Preceding gene: 213692625

Following gene: 213692629

Centisome position: 68.29

GC content: 62.36

Gene sequence:

>2253_bases
ATGGCTAAAGAAACGAAGATCAAGGAAGATACCGTCACCGTGCCTGTCGCCCAAGGCGACCTCGATGCGGTGAGCAATGC
TGAATTCTACAACCCTCACGGAGTTCTCGGCGGGCATCTCGGCATCGGCAAGCATGCCGACACCGCCACAATCCGTGTGC
TGCGTCCGCTTGCCAAGTCCGTGACCATCCTCACCCAGGATGGTGAATACCCGATGACCCACGAATACAACGGCGTGTTC
GTGACTACCGTGCCGGCTTCCGGCACCAAGAAGCAGCCCACGATTCCCGACTACCGCGTCAGGACCGAGTGGGAAAGCGG
CGCAGTGCTCATTGAGGACGACCCATACCGTTATATGCCCACAGTCGGCGACATGGACACCTATCTGTTCGGCGAGGGCC
GTCACGAGAAGCTCTGGGAGGCGCTTGGCGCGCATGTGCTGCGCTATGACGATCCGATGGGCGGCGTAGACGGCACGCCT
GGCGAACAGGTGGTAGGCACCGCGTTCTCCGTGTGGGCCCCGAACGCTCACGCCGTGCGCGTGGTCGGTAACTTCAACGC
CTGGGATGGCCGTCGTCATGCCATGCGCGAGCTCGGCTCCTCCGGCGTGTGGGAAATCTTCATCCCCGGAATCGGCGCGG
GCGAGACCTACAAGTTCCAGATCCTGAACGCCAATTACACGTGGGAGATGAAGGCTGACCCGATGGAGCGTCAGCACGAG
GTTCCGCCGAACACCGCCTCCATCGTCACCGAATCCACCTACGAGTGGAACGATGACGCCTGGATGCAGCACCGCCGCAC
CACCAACCCGCATGATGGCCCGGTCTCCATCTATGAGGTGCACGCCGGCAGCTGGAAGCAGGGACTGACCTACCGTGACC
TGGCCAAGCAGCTCGTGGACTACGTCAGGCAGGAAGGCTTCACCCACGTGGAGTTCATGCCACTGGCCCAGCACCCGTTC
TCCGGCTCCTGGGGCTATCAGGTCACCGGCTACTATGCGGTGGACTCCCGTCTCGGTTCCCCCGACGACTTCCGTTACCT
TGTCGACCAGTTCCATCAGGCCGGCATCGGCGTGATCATGGACTGGGTGCCCGCCCACTTCCCGAAGGACGCCTTCGCGC
TCGGCCGCTTCGACGGCACCCCGCTGTACGAGGACCCGGACCCGCTGCGCGGCGAACACCCCGAGTGGGGCACCTATGTG
TTCAACTTCGGACGCCGCGAAGTACGCAACTTCCTGGTGGCCAACGCCCTGTTCTGGCTCGAGGACCTGCACGTCGACGC
ACTGCGCGTGGATGCCGTCAGCTCCATGCTCTACCTCGACTACAGCCGCGAACCCGGCCAGTGGCGTCCGAACATCTACG
GCGGACGCGAAAACCTGGAGGCCATCGACTTCCTCAAGGAAGCCACCGCCACCGCGTACAAGAACAACCCCGGCGTCATG
ATGATCGCCGAAGAGTCCACCGCATGGCCGGGCATCACCGCCCCCACCTCCGCCGGAGGCATCGGCTTCGGCATGAAGTG
GAACATGGGCTGGATGCACGACACCCTCGAGTATCTGCACGAGGAGCCCATCAACCGCAAGTGGCACCACAACGAAATCA
CCTTCTCCATGGTGTACGCCTACTCCGAACACTACGTATTGCCCATCAGCCACGATGAAGTCGTGTACGGCAAGGGCTCC
CTGTACGGCAAGATGCCGGGCGATGGCTGGCAGAAGCTAGCCGGCGTGCGTTCGATGTTCGCCTATCAGTGGGCTCACCC
GGGCAAGAAGCTCTCCTTCATGGGCAACGAGCTGGCCCAGTGGGGCGAGTGGGATCACGACGCCTCCATCGATTGGGATT
GCCTGAACTGGCAGGAGCACCGTCAGGTCCAGACCATGGTCGCCGACCTTAACGCCTTCTACAAGGCGCATCCGGCACTT
TGGAGCCAGGACTTCGATCCGGCCGGCTTCCAGTGGCTGACCAGCGACGATGCAGACCACAACACGCTGAGCTTCCTGCG
CATCGGCACCAAGGGCGAGACCTTGGCCGTGGTGGTCAACTTCTCCGGTGAAGCCTGGTCCGATTACCAGGTGGCGCTGC
CCACCGGCGGCAAGTGGACCGAAGTGTTCACCACCGATGACGCCAAGTACGGCGGCTCCGACATCCACAACGGCACCTTT
GAAGCGGTCGAGGGCGAATATCATTCGCGTCCGTTCTCGGCGAAGATCACCGTTCCGGCTCTGGGAGTTGTATTCTTGAA
GCCGGAAGACTGA

Upstream 100 bases:

>100_bases
GCGCTCACAACCACGAAGACACACCGAAAAGGGCAAGAATTCGCCATTTTCGACGCGCCAATGTAGCGTTTTCGACTCCA
ACGCACGTAAACTTTGGGTC

Downstream 100 bases:

>100_bases
ACTGGTCAACAGGCTGAAAGGTAACCGGTTTATTTATGCTCAATACCACAGCGCGTCAGAATACGACACCGCGCACGGTG
CTGGTGGTCGAGGACGAGCC

Product: glycogen branching enzyme

Products: NA

Alternate protein names: 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase; Glycogen-branching enzyme; BE [H]

Number of amino acids: Translated: 750; Mature: 749

Protein sequence:

>750_residues
MAKETKIKEDTVTVPVAQGDLDAVSNAEFYNPHGVLGGHLGIGKHADTATIRVLRPLAKSVTILTQDGEYPMTHEYNGVF
VTTVPASGTKKQPTIPDYRVRTEWESGAVLIEDDPYRYMPTVGDMDTYLFGEGRHEKLWEALGAHVLRYDDPMGGVDGTP
GEQVVGTAFSVWAPNAHAVRVVGNFNAWDGRRHAMRELGSSGVWEIFIPGIGAGETYKFQILNANYTWEMKADPMERQHE
VPPNTASIVTESTYEWNDDAWMQHRRTTNPHDGPVSIYEVHAGSWKQGLTYRDLAKQLVDYVRQEGFTHVEFMPLAQHPF
SGSWGYQVTGYYAVDSRLGSPDDFRYLVDQFHQAGIGVIMDWVPAHFPKDAFALGRFDGTPLYEDPDPLRGEHPEWGTYV
FNFGRREVRNFLVANALFWLEDLHVDALRVDAVSSMLYLDYSREPGQWRPNIYGGRENLEAIDFLKEATATAYKNNPGVM
MIAEESTAWPGITAPTSAGGIGFGMKWNMGWMHDTLEYLHEEPINRKWHHNEITFSMVYAYSEHYVLPISHDEVVYGKGS
LYGKMPGDGWQKLAGVRSMFAYQWAHPGKKLSFMGNELAQWGEWDHDASIDWDCLNWQEHRQVQTMVADLNAFYKAHPAL
WSQDFDPAGFQWLTSDDADHNTLSFLRIGTKGETLAVVVNFSGEAWSDYQVALPTGGKWTEVFTTDDAKYGGSDIHNGTF
EAVEGEYHSRPFSAKITVPALGVVFLKPED

Sequences:

>Translated_750_residues
MAKETKIKEDTVTVPVAQGDLDAVSNAEFYNPHGVLGGHLGIGKHADTATIRVLRPLAKSVTILTQDGEYPMTHEYNGVF
VTTVPASGTKKQPTIPDYRVRTEWESGAVLIEDDPYRYMPTVGDMDTYLFGEGRHEKLWEALGAHVLRYDDPMGGVDGTP
GEQVVGTAFSVWAPNAHAVRVVGNFNAWDGRRHAMRELGSSGVWEIFIPGIGAGETYKFQILNANYTWEMKADPMERQHE
VPPNTASIVTESTYEWNDDAWMQHRRTTNPHDGPVSIYEVHAGSWKQGLTYRDLAKQLVDYVRQEGFTHVEFMPLAQHPF
SGSWGYQVTGYYAVDSRLGSPDDFRYLVDQFHQAGIGVIMDWVPAHFPKDAFALGRFDGTPLYEDPDPLRGEHPEWGTYV
FNFGRREVRNFLVANALFWLEDLHVDALRVDAVSSMLYLDYSREPGQWRPNIYGGRENLEAIDFLKEATATAYKNNPGVM
MIAEESTAWPGITAPTSAGGIGFGMKWNMGWMHDTLEYLHEEPINRKWHHNEITFSMVYAYSEHYVLPISHDEVVYGKGS
LYGKMPGDGWQKLAGVRSMFAYQWAHPGKKLSFMGNELAQWGEWDHDASIDWDCLNWQEHRQVQTMVADLNAFYKAHPAL
WSQDFDPAGFQWLTSDDADHNTLSFLRIGTKGETLAVVVNFSGEAWSDYQVALPTGGKWTEVFTTDDAKYGGSDIHNGTF
EAVEGEYHSRPFSAKITVPALGVVFLKPED
>Mature_749_residues
AKETKIKEDTVTVPVAQGDLDAVSNAEFYNPHGVLGGHLGIGKHADTATIRVLRPLAKSVTILTQDGEYPMTHEYNGVFV
TTVPASGTKKQPTIPDYRVRTEWESGAVLIEDDPYRYMPTVGDMDTYLFGEGRHEKLWEALGAHVLRYDDPMGGVDGTPG
EQVVGTAFSVWAPNAHAVRVVGNFNAWDGRRHAMRELGSSGVWEIFIPGIGAGETYKFQILNANYTWEMKADPMERQHEV
PPNTASIVTESTYEWNDDAWMQHRRTTNPHDGPVSIYEVHAGSWKQGLTYRDLAKQLVDYVRQEGFTHVEFMPLAQHPFS
GSWGYQVTGYYAVDSRLGSPDDFRYLVDQFHQAGIGVIMDWVPAHFPKDAFALGRFDGTPLYEDPDPLRGEHPEWGTYVF
NFGRREVRNFLVANALFWLEDLHVDALRVDAVSSMLYLDYSREPGQWRPNIYGGRENLEAIDFLKEATATAYKNNPGVMM
IAEESTAWPGITAPTSAGGIGFGMKWNMGWMHDTLEYLHEEPINRKWHHNEITFSMVYAYSEHYVLPISHDEVVYGKGSL
YGKMPGDGWQKLAGVRSMFAYQWAHPGKKLSFMGNELAQWGEWDHDASIDWDCLNWQEHRQVQTMVADLNAFYKAHPALW
SQDFDPAGFQWLTSDDADHNTLSFLRIGTKGETLAVVVNFSGEAWSDYQVALPTGGKWTEVFTTDDAKYGGSDIHNGTFE
AVEGEYHSRPFSAKITVPALGVVFLKPED

Specific function: Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position [H]

COG id: COG0296

COG function: function code G; 1,4-alpha-glucan branching enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family [H]

Homologues:

Organism=Homo sapiens, GI189458812, Length=634, Percent_Identity=25.5520504731861, Blast_Score=163, Evalue=6e-40,
Organism=Escherichia coli, GI1789839, Length=747, Percent_Identity=45.2476572958501, Blast_Score=648, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17554896, Length=642, Percent_Identity=24.9221183800623, Blast_Score=169, Evalue=6e-42,
Organism=Caenorhabditis elegans, GI32564391, Length=547, Percent_Identity=25.5941499085923, Blast_Score=154, Evalue=2e-37,
Organism=Saccharomyces cerevisiae, GI6320826, Length=657, Percent_Identity=24.0487062404871, Blast_Score=157, Evalue=8e-39,
Organism=Drosophila melanogaster, GI28573410, Length=621, Percent_Identity=26.2479871175523, Blast_Score=169, Evalue=5e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006407
- InterPro:   IPR006048
- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR004193
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783
- InterPro:   IPR014756 [H]

Pfam domain/function: PF00128 Alpha-amylase; PF02806 Alpha-amylase_C; PF02922 CBM_48 [H]

EC number: =2.4.1.18 [H]

Molecular weight: Translated: 84514; Mature: 84383

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKETKIKEDTVTVPVAQGDLDAVSNAEFYNPHGVLGGHLGIGKHADTATIRVLRPLAKS
CCCCCCCCCCEEEEEEECCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
VTILTQDGEYPMTHEYNGVFVTTVPASGTKKQPTIPDYRVRTEWESGAVLIEDDPYRYMP
EEEEEECCCCCCCEECCCEEEEEECCCCCCCCCCCCCCEEEEECCCCEEEEECCCCEECC
TVGDMDTYLFGEGRHEKLWEALGAHVLRYDDPMGGVDGTPGEQVVGTAFSVWAPNAHAVR
CCCCCCEEEECCCCHHHHHHHHCCEEEEECCCCCCCCCCCCCHHHCCEEEEECCCCCEEE
VVGNFNAWDGRRHAMRELGSSGVWEIFIPGIGAGETYKFQILNANYTWEMKADPMERQHE
EEECCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEEECCEEEEECCCCHHHHCC
VPPNTASIVTESTYEWNDDAWMQHRRTTNPHDGPVSIYEVHAGSWKQGLTYRDLAKQLVD
CCCCCHHEEECCCCCCCCHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHH
YVRQEGFTHVEFMPLAQHPFSGSWGYQVTGYYAVDSRLGSPDDFRYLVDQFHQAGIGVIM
HHHHCCCCEEEEEECCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEE
DWVPAHFPKDAFALGRFDGTPLYEDPDPLRGEHPEWGTYVFNFGRREVRNFLVANALFWL
HHHCCCCCCCHHEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHH
EDLHVDALRVDAVSSMLYLDYSREPGQWRPNIYGGRENLEAIDFLKEATATAYKNNPGVM
HHCCCCEEEHHHHHEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEECCCCEE
MIAEESTAWPGITAPTSAGGIGFGMKWNMGWMHDTLEYLHEEPINRKWHHNEITFSMVYA
EEEECCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEEE
YSEHYVLPISHDEVVYGKGSLYGKMPGDGWQKLAGVRSMFAYQWAHPGKKLSFMGNELAQ
ECCCEEEEECCCCEEEECCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHH
WGEWDHDASIDWDCLNWQEHRQVQTMVADLNAFYKAHPALWSQDFDPAGFQWLTSDDADH
CCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCC
NTLSFLRIGTKGETLAVVVNFSGEAWSDYQVALPTGGKWTEVFTTDDAKYGGSDIHNGTF
CEEEEEEECCCCCEEEEEEECCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCE
EAVEGEYHSRPFSAKITVPALGVVFLKPED
EEECCHHCCCCCEEEEEECEEEEEEECCCC
>Mature Secondary Structure 
AKETKIKEDTVTVPVAQGDLDAVSNAEFYNPHGVLGGHLGIGKHADTATIRVLRPLAKS
CCCCCCCCCEEEEEEECCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
VTILTQDGEYPMTHEYNGVFVTTVPASGTKKQPTIPDYRVRTEWESGAVLIEDDPYRYMP
EEEEEECCCCCCCEECCCEEEEEECCCCCCCCCCCCCCEEEEECCCCEEEEECCCCEECC
TVGDMDTYLFGEGRHEKLWEALGAHVLRYDDPMGGVDGTPGEQVVGTAFSVWAPNAHAVR
CCCCCCEEEECCCCHHHHHHHHCCEEEEECCCCCCCCCCCCCHHHCCEEEEECCCCCEEE
VVGNFNAWDGRRHAMRELGSSGVWEIFIPGIGAGETYKFQILNANYTWEMKADPMERQHE
EEECCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEEECCEEEEECCCCHHHHCC
VPPNTASIVTESTYEWNDDAWMQHRRTTNPHDGPVSIYEVHAGSWKQGLTYRDLAKQLVD
CCCCCHHEEECCCCCCCCHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHH
YVRQEGFTHVEFMPLAQHPFSGSWGYQVTGYYAVDSRLGSPDDFRYLVDQFHQAGIGVIM
HHHHCCCCEEEEEECCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEE
DWVPAHFPKDAFALGRFDGTPLYEDPDPLRGEHPEWGTYVFNFGRREVRNFLVANALFWL
HHHCCCCCCCHHEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHH
EDLHVDALRVDAVSSMLYLDYSREPGQWRPNIYGGRENLEAIDFLKEATATAYKNNPGVM
HHCCCCEEEHHHHHEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEECCCCEE
MIAEESTAWPGITAPTSAGGIGFGMKWNMGWMHDTLEYLHEEPINRKWHHNEITFSMVYA
EEEECCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEEE
YSEHYVLPISHDEVVYGKGSLYGKMPGDGWQKLAGVRSMFAYQWAHPGKKLSFMGNELAQ
ECCCEEEEECCCCEEEECCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHH
WGEWDHDASIDWDCLNWQEHRQVQTMVADLNAFYKAHPALWSQDFDPAGFQWLTSDDADH
CCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCC
NTLSFLRIGTKGETLAVVVNFSGEAWSDYQVALPTGGKWTEVFTTDDAKYGGSDIHNGTF
CEEEEEEECCCCCEEEEEEECCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCE
EAVEGEYHSRPFSAKITVPALGVVFLKPED
EEECCHHCCCCCEEEEEECEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12381787 [H]