| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is ygjT [C]
Identifier: 213692613
GI number: 213692613
Start: 1918163
End: 1919149
Strand: Reverse
Name: ygjT [C]
Synonym: Blon_1746
Alternate gene names: 213692613
Gene position: 1919149-1918163 (Counterclockwise)
Preceding gene: 213692614
Following gene: 213692612
Centisome position: 67.75
GC content: 58.16
Gene sequence:
>987_bases ATGGCAGAAACCCCACTCGCATTTGAAATCATCACCTTCGTGGTGCTCGCGCTGTTCTTCATCGTCGACCTGTTCGTCAT CGGGCGCCGACCGCATGTGCCCTCCACCAAGGAATGCGTGCAGCATATCGCCTTCTTCGTGGTCATGGCGCTGATGTTCG GCGGATGCATCTGGTTCTTCGCCGGCTCCAAGCCCGCCATCGAGTTCTATTCCGGCTGGCTCACCGAATACTCGTTGTCC ATCGACAACCTATTCGTGTTCGTCATCATCATGTCGAACTTCGCGGTGCCCAAGCAGGTTCAGAAGTATGTGCTGTCCGT CGGTATCACCATCGCTTTGATCTTCCGTGGCATTTTCATTCTGATCGGCGCGGCCCTGATCACCCGCTTCACATGGGTGT TCTTCCTGTTCGGCGCCTTCCTGATCTACACCGCCGTCAAACTGGTGCTCGGCGGCGATGAAGACGAGGAATATCACGAG AACGGCATCATCCGTAATCTGCGCAAGATCATCAAGATCACCGACGACTACGACGGCGAGAAGCTGCGCACCACCAAGAA CGGCGTGCGTTACTGGACCCCGATGCTCATCGTGTTCCTGACCATCGGCACCACCGACGTCATGTTCGCTTTCGACTCGA TTCCCGCGATCTTCGGCCTGACCAAGGATCCGTTCCTGGTGTTCACCTCCAACGTGTTCGCCCTGCTCGGCCTGCAGCAG CTGTACTTCCTGCTGGGCGCCCTGCTCGACAAGCTCGTCTACCTGCCTGCCGGCCTGTCCGTGGTGCTGGGCTTCATCGG CGTCAAGCTCATCATGGAGGCCCTGCACGGCAATACCTTGCCGTTCATCAACGGCGGCGAAGGCATCCATTGGGTGCCGG AAGTGCCCACATGGCTGTCGCTGGCTGTGATTGTGGTCGCAATTGGCGGCGCATCCGTGGCTTCCGTGATCAAGATGAAG AGCATGGAAAGCGCCGAGAAGGCCTGA
Upstream 100 bases:
>100_bases CCCGTCTGCGCGACGAGATCCGTGATCTCAAGAAGGAGCTCCGGCAGATGACCGAGGCGGGGCAATGACCCGTCACATAC ATGGGTTAGTGTAGGGAATC
Downstream 100 bases:
>100_bases AATCGTTAGAGAATACAACCCTTAAACCCAGTCAACACAACAATGTGAGCGCTCACAACACACCGTGAAGAAAACTTGTC ATGAGTCGGCTCGCGCTAGT
Product: Integral membrane protein TerC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 328; Mature: 327
Protein sequence:
>328_residues MAETPLAFEIITFVVLALFFIVDLFVIGRRPHVPSTKECVQHIAFFVVMALMFGGCIWFFAGSKPAIEFYSGWLTEYSLS IDNLFVFVIIMSNFAVPKQVQKYVLSVGITIALIFRGIFILIGAALITRFTWVFFLFGAFLIYTAVKLVLGGDEDEEYHE NGIIRNLRKIIKITDDYDGEKLRTTKNGVRYWTPMLIVFLTIGTTDVMFAFDSIPAIFGLTKDPFLVFTSNVFALLGLQQ LYFLLGALLDKLVYLPAGLSVVLGFIGVKLIMEALHGNTLPFINGGEGIHWVPEVPTWLSLAVIVVAIGGASVASVIKMK SMESAEKA
Sequences:
>Translated_328_residues MAETPLAFEIITFVVLALFFIVDLFVIGRRPHVPSTKECVQHIAFFVVMALMFGGCIWFFAGSKPAIEFYSGWLTEYSLS IDNLFVFVIIMSNFAVPKQVQKYVLSVGITIALIFRGIFILIGAALITRFTWVFFLFGAFLIYTAVKLVLGGDEDEEYHE NGIIRNLRKIIKITDDYDGEKLRTTKNGVRYWTPMLIVFLTIGTTDVMFAFDSIPAIFGLTKDPFLVFTSNVFALLGLQQ LYFLLGALLDKLVYLPAGLSVVLGFIGVKLIMEALHGNTLPFINGGEGIHWVPEVPTWLSLAVIVVAIGGASVASVIKMK SMESAEKA >Mature_327_residues AETPLAFEIITFVVLALFFIVDLFVIGRRPHVPSTKECVQHIAFFVVMALMFGGCIWFFAGSKPAIEFYSGWLTEYSLSI DNLFVFVIIMSNFAVPKQVQKYVLSVGITIALIFRGIFILIGAALITRFTWVFFLFGAFLIYTAVKLVLGGDEDEEYHEN GIIRNLRKIIKITDDYDGEKLRTTKNGVRYWTPMLIVFLTIGTTDVMFAFDSIPAIFGLTKDPFLVFTSNVFALLGLQQL YFLLGALLDKLVYLPAGLSVVLGFIGVKLIMEALHGNTLPFINGGEGIHWVPEVPTWLSLAVIVVAIGGASVASVIKMKS MESAEKA
Specific function: Unknown
COG id: COG0861
COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the terC family [H]
Homologues:
Organism=Escherichia coli, GI48994922, Length=268, Percent_Identity=38.8059701492537, Blast_Score=201, Evalue=4e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005496 - InterPro: IPR022369 [H]
Pfam domain/function: PF03741 TerC [H]
EC number: NA
Molecular weight: Translated: 36410; Mature: 36279
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAETPLAFEIITFVVLALFFIVDLFVIGRRPHVPSTKECVQHIAFFVVMALMFGGCIWFF CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AGSKPAIEFYSGWLTEYSLSIDNLFVFVIIMSNFAVPKQVQKYVLSVGITIALIFRGIFI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH LIGAALITRFTWVFFLFGAFLIYTAVKLVLGGDEDEEYHENGIIRNLRKIIKITDDYDGE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC KLRTTKNGVRYWTPMLIVFLTIGTTDVMFAFDSIPAIFGLTKDPFLVFTSNVFALLGLQQ HHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHH LYFLLGALLDKLVYLPAGLSVVLGFIGVKLIMEALHGNTLPFINGGEGIHWVPEVPTWLS HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEECCCCCHHHH LAVIVVAIGGASVASVIKMKSMESAEKA HHHHHHHHCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AETPLAFEIITFVVLALFFIVDLFVIGRRPHVPSTKECVQHIAFFVVMALMFGGCIWFF CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AGSKPAIEFYSGWLTEYSLSIDNLFVFVIIMSNFAVPKQVQKYVLSVGITIALIFRGIFI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH LIGAALITRFTWVFFLFGAFLIYTAVKLVLGGDEDEEYHENGIIRNLRKIIKITDDYDGE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC KLRTTKNGVRYWTPMLIVFLTIGTTDVMFAFDSIPAIFGLTKDPFLVFTSNVFALLGLQQ HHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHH LYFLLGALLDKLVYLPAGLSVVLGFIGVKLIMEALHGNTLPFINGGEGIHWVPEVPTWLS HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEECCCCCHHHH LAVIVVAIGGASVASVIKMKSMESAEKA HHHHHHHHCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]