Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is ygjT [C]

Identifier: 213692613

GI number: 213692613

Start: 1918163

End: 1919149

Strand: Reverse

Name: ygjT [C]

Synonym: Blon_1746

Alternate gene names: 213692613

Gene position: 1919149-1918163 (Counterclockwise)

Preceding gene: 213692614

Following gene: 213692612

Centisome position: 67.75

GC content: 58.16

Gene sequence:

>987_bases
ATGGCAGAAACCCCACTCGCATTTGAAATCATCACCTTCGTGGTGCTCGCGCTGTTCTTCATCGTCGACCTGTTCGTCAT
CGGGCGCCGACCGCATGTGCCCTCCACCAAGGAATGCGTGCAGCATATCGCCTTCTTCGTGGTCATGGCGCTGATGTTCG
GCGGATGCATCTGGTTCTTCGCCGGCTCCAAGCCCGCCATCGAGTTCTATTCCGGCTGGCTCACCGAATACTCGTTGTCC
ATCGACAACCTATTCGTGTTCGTCATCATCATGTCGAACTTCGCGGTGCCCAAGCAGGTTCAGAAGTATGTGCTGTCCGT
CGGTATCACCATCGCTTTGATCTTCCGTGGCATTTTCATTCTGATCGGCGCGGCCCTGATCACCCGCTTCACATGGGTGT
TCTTCCTGTTCGGCGCCTTCCTGATCTACACCGCCGTCAAACTGGTGCTCGGCGGCGATGAAGACGAGGAATATCACGAG
AACGGCATCATCCGTAATCTGCGCAAGATCATCAAGATCACCGACGACTACGACGGCGAGAAGCTGCGCACCACCAAGAA
CGGCGTGCGTTACTGGACCCCGATGCTCATCGTGTTCCTGACCATCGGCACCACCGACGTCATGTTCGCTTTCGACTCGA
TTCCCGCGATCTTCGGCCTGACCAAGGATCCGTTCCTGGTGTTCACCTCCAACGTGTTCGCCCTGCTCGGCCTGCAGCAG
CTGTACTTCCTGCTGGGCGCCCTGCTCGACAAGCTCGTCTACCTGCCTGCCGGCCTGTCCGTGGTGCTGGGCTTCATCGG
CGTCAAGCTCATCATGGAGGCCCTGCACGGCAATACCTTGCCGTTCATCAACGGCGGCGAAGGCATCCATTGGGTGCCGG
AAGTGCCCACATGGCTGTCGCTGGCTGTGATTGTGGTCGCAATTGGCGGCGCATCCGTGGCTTCCGTGATCAAGATGAAG
AGCATGGAAAGCGCCGAGAAGGCCTGA

Upstream 100 bases:

>100_bases
CCCGTCTGCGCGACGAGATCCGTGATCTCAAGAAGGAGCTCCGGCAGATGACCGAGGCGGGGCAATGACCCGTCACATAC
ATGGGTTAGTGTAGGGAATC

Downstream 100 bases:

>100_bases
AATCGTTAGAGAATACAACCCTTAAACCCAGTCAACACAACAATGTGAGCGCTCACAACACACCGTGAAGAAAACTTGTC
ATGAGTCGGCTCGCGCTAGT

Product: Integral membrane protein TerC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 327

Protein sequence:

>328_residues
MAETPLAFEIITFVVLALFFIVDLFVIGRRPHVPSTKECVQHIAFFVVMALMFGGCIWFFAGSKPAIEFYSGWLTEYSLS
IDNLFVFVIIMSNFAVPKQVQKYVLSVGITIALIFRGIFILIGAALITRFTWVFFLFGAFLIYTAVKLVLGGDEDEEYHE
NGIIRNLRKIIKITDDYDGEKLRTTKNGVRYWTPMLIVFLTIGTTDVMFAFDSIPAIFGLTKDPFLVFTSNVFALLGLQQ
LYFLLGALLDKLVYLPAGLSVVLGFIGVKLIMEALHGNTLPFINGGEGIHWVPEVPTWLSLAVIVVAIGGASVASVIKMK
SMESAEKA

Sequences:

>Translated_328_residues
MAETPLAFEIITFVVLALFFIVDLFVIGRRPHVPSTKECVQHIAFFVVMALMFGGCIWFFAGSKPAIEFYSGWLTEYSLS
IDNLFVFVIIMSNFAVPKQVQKYVLSVGITIALIFRGIFILIGAALITRFTWVFFLFGAFLIYTAVKLVLGGDEDEEYHE
NGIIRNLRKIIKITDDYDGEKLRTTKNGVRYWTPMLIVFLTIGTTDVMFAFDSIPAIFGLTKDPFLVFTSNVFALLGLQQ
LYFLLGALLDKLVYLPAGLSVVLGFIGVKLIMEALHGNTLPFINGGEGIHWVPEVPTWLSLAVIVVAIGGASVASVIKMK
SMESAEKA
>Mature_327_residues
AETPLAFEIITFVVLALFFIVDLFVIGRRPHVPSTKECVQHIAFFVVMALMFGGCIWFFAGSKPAIEFYSGWLTEYSLSI
DNLFVFVIIMSNFAVPKQVQKYVLSVGITIALIFRGIFILIGAALITRFTWVFFLFGAFLIYTAVKLVLGGDEDEEYHEN
GIIRNLRKIIKITDDYDGEKLRTTKNGVRYWTPMLIVFLTIGTTDVMFAFDSIPAIFGLTKDPFLVFTSNVFALLGLQQL
YFLLGALLDKLVYLPAGLSVVLGFIGVKLIMEALHGNTLPFINGGEGIHWVPEVPTWLSLAVIVVAIGGASVASVIKMKS
MESAEKA

Specific function: Unknown

COG id: COG0861

COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the terC family [H]

Homologues:

Organism=Escherichia coli, GI48994922, Length=268, Percent_Identity=38.8059701492537, Blast_Score=201, Evalue=4e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005496
- InterPro:   IPR022369 [H]

Pfam domain/function: PF03741 TerC [H]

EC number: NA

Molecular weight: Translated: 36410; Mature: 36279

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AETPLAFEIITFVVLALFFIVDLFVIGRRPHVPSTKECVQHIAFFVVMALMFGGCIWFF
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH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HHHHHHHHCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]