| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is pip [H]
Identifier: 213692559
GI number: 213692559
Start: 1845065
End: 1846543
Strand: Reverse
Name: pip [H]
Synonym: Blon_1691
Alternate gene names: 213692559
Gene position: 1846543-1845065 (Counterclockwise)
Preceding gene: 213692562
Following gene: 213692558
Centisome position: 65.19
GC content: 63.42
Gene sequence:
>1479_bases ATGACAATGCTGAGCAAATACCACGTGCCCGGACTGGCCATAGAGGACCATTCCATCGATGTTCCGCTCGACTGGACCGG CCACGAGCCCGGACGGGCATTCGACGGGGAAACCATCAAACTGTTCTATCGCGTGGTCACCGCGCCCGAACACGTGCATG ACGACCTGCCCCTGCTGATCTTCCTGCAAGGCGGTCCCGGCGGTGCCGGCCCGCGCCTCAACAGCCCGACCTCCGACGGA TGGATCGAGGAGGCCATCAGGCACTTCCGGGTGATCCTGCCCGACCAGCGCGGCACCGGCCGCTCCTCGCGCGTGGACAC GCACGCCATGGCCCGCATCGCCGCCGCGCACGACGATGATGCCGTGGCAGGCGCCCGAGCCCAGGCCGACTACCTGAAGA AGTTCCTTGCCGATTCCATCGTGCGTGACTTCGAACATCTGCGCCTGACCGAATTCGGTGGCCGCAAGTGGGTGACGATG GGCCAAAGCTACGGCGGCTTCCTGACCCTGACCACACTGTCCCTGTTCCCGGCCGGCGTAATCGCCAGCTTCACCACCGG CGGCATCCCGCACGTGCCGGCCGACGCCGCTGAAGTGTACGAGCATACCTTCCCGCGCATGGTGCGCAAGACGACTCAGT TCTACGAGCGCTACCCACAGGACAAGGAGCGCGTGGCCGCCATCGCCGACAAGCTGCCGACTACTGCGGAAGTCGCCGAA TTCGTTGGCAAACTCACCGATTCCGTACTGAATCCGATGGCTGGTACCGATGTGGAGCATCGACTTGGCGTGATCGCCGG CATGGCCGCCCACGGCTTCCCGCTGCTGCCGAACGGCGACCCACTCACCGTCGAACGGTTCCAGTGCCTTGGCGGTGACT TCGGCATGAAACCCAGCTTCGAGCGCGTCCACTGGATTCTCGACGACGCCTTCCTCGACGGCGACGGCACCGTGCGTGAC GGATCGCCGCTGTCCGACGAATTCCTGTCCAAGGTGATGGCCGCCACGTCGTCGCGCCCGCTGTATTGGCCGTTGCAGGA ATTCATCTACGCCAACGGCGAGCTTGACGAGCCCATTCGCTGGGCCGCCCAGCGCGTGCGCGATGGCAAGCCCGAATTCG ATGCCGTTGCGCGTCCGCTCAACTTCACCGGCGAGGCCATGTTCCCGTGGATGTTCGAACAGGAGTCTGCGTTACGCCCG TTCAGGCCGGCCATGGACCTGCTCATGGAAGACACGCACTTCGGCGTGATCTATGACGAAGAACAGCTGGCCCGCAATGA GGTGCCGTTGCAGGCCGCCGTCTATTTCGACGATATGTACGTCGATTCCGGCCTGCAGCTCGACACCTTGAGCCGCGTGG GTAACAGCCACTACTGGACCACCAACGAATTCGAGCATGATGGTCTGCACGGCCCGCTCGTCTTCAAGCATCTCTATGAC GAAGCCCTCAACCGGGGCGATCTTGAAGCATTGTTCTGA
Upstream 100 bases:
>100_bases TCATCTCCATAACGCACAAGGCTAGCGTGTCCGGAGACGAACCGGTATCACTCTTCAGGAGGATTTGTGGACTAGAGTTT GTGGACTAGAGTCTTGAACC
Downstream 100 bases:
>100_bases CTCAAGGAAGCAAGCTCCCTCTGATGAGGGAGCTCTGTATACATGCACGAAAGGAAAACGTATGACTCAGAACCTCACCA TCGGTTTTATCGGATATGGC
Product: proline iminopeptidase
Products: NA
Alternate protein names: PIP; Prolyl aminopeptidase; PAP [H]
Number of amino acids: Translated: 492; Mature: 491
Protein sequence:
>492_residues MTMLSKYHVPGLAIEDHSIDVPLDWTGHEPGRAFDGETIKLFYRVVTAPEHVHDDLPLLIFLQGGPGGAGPRLNSPTSDG WIEEAIRHFRVILPDQRGTGRSSRVDTHAMARIAAAHDDDAVAGARAQADYLKKFLADSIVRDFEHLRLTEFGGRKWVTM GQSYGGFLTLTTLSLFPAGVIASFTTGGIPHVPADAAEVYEHTFPRMVRKTTQFYERYPQDKERVAAIADKLPTTAEVAE FVGKLTDSVLNPMAGTDVEHRLGVIAGMAAHGFPLLPNGDPLTVERFQCLGGDFGMKPSFERVHWILDDAFLDGDGTVRD GSPLSDEFLSKVMAATSSRPLYWPLQEFIYANGELDEPIRWAAQRVRDGKPEFDAVARPLNFTGEAMFPWMFEQESALRP FRPAMDLLMEDTHFGVIYDEEQLARNEVPLQAAVYFDDMYVDSGLQLDTLSRVGNSHYWTTNEFEHDGLHGPLVFKHLYD EALNRGDLEALF
Sequences:
>Translated_492_residues MTMLSKYHVPGLAIEDHSIDVPLDWTGHEPGRAFDGETIKLFYRVVTAPEHVHDDLPLLIFLQGGPGGAGPRLNSPTSDG WIEEAIRHFRVILPDQRGTGRSSRVDTHAMARIAAAHDDDAVAGARAQADYLKKFLADSIVRDFEHLRLTEFGGRKWVTM GQSYGGFLTLTTLSLFPAGVIASFTTGGIPHVPADAAEVYEHTFPRMVRKTTQFYERYPQDKERVAAIADKLPTTAEVAE FVGKLTDSVLNPMAGTDVEHRLGVIAGMAAHGFPLLPNGDPLTVERFQCLGGDFGMKPSFERVHWILDDAFLDGDGTVRD GSPLSDEFLSKVMAATSSRPLYWPLQEFIYANGELDEPIRWAAQRVRDGKPEFDAVARPLNFTGEAMFPWMFEQESALRP FRPAMDLLMEDTHFGVIYDEEQLARNEVPLQAAVYFDDMYVDSGLQLDTLSRVGNSHYWTTNEFEHDGLHGPLVFKHLYD EALNRGDLEALF >Mature_491_residues TMLSKYHVPGLAIEDHSIDVPLDWTGHEPGRAFDGETIKLFYRVVTAPEHVHDDLPLLIFLQGGPGGAGPRLNSPTSDGW IEEAIRHFRVILPDQRGTGRSSRVDTHAMARIAAAHDDDAVAGARAQADYLKKFLADSIVRDFEHLRLTEFGGRKWVTMG QSYGGFLTLTTLSLFPAGVIASFTTGGIPHVPADAAEVYEHTFPRMVRKTTQFYERYPQDKERVAAIADKLPTTAEVAEF VGKLTDSVLNPMAGTDVEHRLGVIAGMAAHGFPLLPNGDPLTVERFQCLGGDFGMKPSFERVHWILDDAFLDGDGTVRDG SPLSDEFLSKVMAATSSRPLYWPLQEFIYANGELDEPIRWAAQRVRDGKPEFDAVARPLNFTGEAMFPWMFEQESALRPF RPAMDLLMEDTHFGVIYDEEQLARNEVPLQAAVYFDDMYVDSGLQLDTLSRVGNSHYWTTNEFEHDGLHGPLVFKHLYDE ALNRGDLEALF
Specific function: Higher activity toward long peptides. Acts on hydroxyproline beta-naphthylamide with almost as high an activity as on proline beta-naphthylamide [H]
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S33 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR002410 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.4.11.5 [H]
Molecular weight: Translated: 54898; Mature: 54767
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMLSKYHVPGLAIEDHSIDVPLDWTGHEPGRAFDGETIKLFYRVVTAPEHVHDDLPLLI CCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHEEHHHHHCCHHHHCCCCCEEE FLQGGPGGAGPRLNSPTSDGWIEEAIRHFRVILPDQRGTGRSSRVDTHAMARIAAAHDDD EEECCCCCCCCCCCCCCCCHHHHHHHHHHEEEECCCCCCCCCCCCHHHHHHHHHHCCCCC AVAGARAQADYLKKFLADSIVRDFEHLRLTEFGGRKWVTMGQSYGGFLTLTTLSLFPAGV HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEHHHHHHHHHH IASFTTGGIPHVPADAAEVYEHTFPRMVRKTTQFYERYPQDKERVAAIADKLPTTAEVAE HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHH FVGKLTDSVLNPMAGTDVEHRLGVIAGMAAHGFPLLPNGDPLTVERFQCLGGDFGMKPSF HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCH ERVHWILDDAFLDGDGTVRDGSPLSDEFLSKVMAATSSRPLYWPLQEFIYANGELDEPIR HHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECHHHHHCCCCCCCHHHH WAAQRVRDGKPEFDAVARPLNFTGEAMFPWMFEQESALRPFRPAMDLLMEDTHFGVIYDE HHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECH EQLARNEVPLQAAVYFDDMYVDSGLQLDTLSRVGNSHYWTTNEFEHDGLHGPLVFKHLYD HHHHHCCCCEEEEEEEEHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH EALNRGDLEALF HHCCCCCHHHCC >Mature Secondary Structure TMLSKYHVPGLAIEDHSIDVPLDWTGHEPGRAFDGETIKLFYRVVTAPEHVHDDLPLLI CCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHEEHHHHHCCHHHHCCCCCEEE FLQGGPGGAGPRLNSPTSDGWIEEAIRHFRVILPDQRGTGRSSRVDTHAMARIAAAHDDD EEECCCCCCCCCCCCCCCCHHHHHHHHHHEEEECCCCCCCCCCCCHHHHHHHHHHCCCCC AVAGARAQADYLKKFLADSIVRDFEHLRLTEFGGRKWVTMGQSYGGFLTLTTLSLFPAGV HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEHHHHHHHHHH IASFTTGGIPHVPADAAEVYEHTFPRMVRKTTQFYERYPQDKERVAAIADKLPTTAEVAE HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHH FVGKLTDSVLNPMAGTDVEHRLGVIAGMAAHGFPLLPNGDPLTVERFQCLGGDFGMKPSF HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCH ERVHWILDDAFLDGDGTVRDGSPLSDEFLSKVMAATSSRPLYWPLQEFIYANGELDEPIR HHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECHHHHHCCCCCCCHHHH WAAQRVRDGKPEFDAVARPLNFTGEAMFPWMFEQESALRPFRPAMDLLMEDTHFGVIYDE HHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECH EQLARNEVPLQAAVYFDDMYVDSGLQLDTLSRVGNSHYWTTNEFEHDGLHGPLVFKHLYD HHHHHCCCCEEEEEEEEHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH EALNRGDLEALF HHCCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7883756 [H]