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The map label for this gene is yccR [C]

Identifier: 213692555

GI number: 213692555

Start: 1841622

End: 1841864

Strand: Direct

Name: yccR [C]

Synonym: Blon_1687

Alternate gene names: 213692555

Gene position: 1841622-1841864 (Clockwise)

Preceding gene: 213692552

Following gene: 213692556

Centisome position: 65.01

GC content: 32.1

Gene sequence:

>243_bases
ATGAAGAATTTATCGGAATTACCTAACATAGGAAACGCTGTAGCTAATCAATTAAAACAAGTTGGTATTTTAGATGAAGA
CGATTTGAAATCCATAGGAGCAGAACAAGCATGGTTGAAAATACAGCAAATTGATAAAACAGCGTGTATCAATAAACTCT
ACGCATTAGAGGGTGCAATCTTAGGCATAAAAAAAAACTTTGTTGCCAAACGAAAGAAAAGAAGCATTAAGAGAATTTTA
TAA

Upstream 100 bases:

>100_bases
CTTCAGATATCCGAAACTCTTCCATTCCTGGGGGCATTGCTTGGTTTAAATAGAACTGATATAATGTGGATAGGAAAACT
GTGAACATCTGGGAGGCAAT

Downstream 100 bases:

>100_bases
CAGATATAAAAAGTAATAGTAAAAACGGATGGAGGTGCCTGTTTGAAACGATATCCCCCTTTAGAAAGGGCCATTACCTA
TATCGAAGCACATCTAAATG

Product: TfoX, C-terminal domain protein

Products: NA

Alternate protein names: TfoX Domain Protein; TfoX C-Terminal Domain Protein; TfoX C-Terminal Domain-Containing Protein; TfoX C- Domain Superfamily

Number of amino acids: Translated: 80; Mature: 80

Protein sequence:

>80_residues
MKNLSELPNIGNAVANQLKQVGILDEDDLKSIGAEQAWLKIQQIDKTACINKLYALEGAILGIKKNFVAKRKKRSIKRIL

Sequences:

>Translated_80_residues
MKNLSELPNIGNAVANQLKQVGILDEDDLKSIGAEQAWLKIQQIDKTACINKLYALEGAILGIKKNFVAKRKKRSIKRIL
>Mature_80_residues
MKNLSELPNIGNAVANQLKQVGILDEDDLKSIGAEQAWLKIQQIDKTACINKLYALEGAILGIKKNFVAKRKKRSIKRIL

Specific function: Unknown

COG id: COG3070

COG function: function code K; Regulator of competence-specific genes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8932; Mature: 8932

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNLSELPNIGNAVANQLKQVGILDEDDLKSIGAEQAWLKIQQIDKTACINKLYALEGAI
CCCHHHCCCCCHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGIKKNFVAKRKKRSIKRIL
HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKNLSELPNIGNAVANQLKQVGILDEDDLKSIGAEQAWLKIQQIDKTACINKLYALEGAI
CCCHHHCCCCCHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGIKKNFVAKRKKRSIKRIL
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA