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The map label for this gene is yccF [H]

Identifier: 213692550

GI number: 213692550

Start: 1834580

End: 1834945

Strand: Direct

Name: yccF [H]

Synonym: Blon_1682

Alternate gene names: 213692550

Gene position: 1834580-1834945 (Clockwise)

Preceding gene: 213692547

Following gene: 213692551

Centisome position: 64.76

GC content: 55.74

Gene sequence:

>366_bases
ATGAGGGTCATCGGCAATATTCTGTGGATCATTCTGGGCGGACTGGCAATCGCCATCAGCTGGACACTGATCGGACTGTT
TCTGTGCATCACCATTATCGGTATTCCACTAGGAGTTCAGGCGTTCAAAATGGCGGGCCTTACCTTGACACCGTTCGGCA
AAACCGTGCAATACGGTGGCGGCGTTGGCTCCACGCTGGCCAATATCCTCTGGGTGGTGCTGGTCGGCTGGTGGATGGCA
CTCGGCTATCTGGGTGCAGGCGTGCTCAACTGCATCACCATCATCGGCATTCCGTTCGGCATCCAGTCGTTCAAAATGGC
CAAGCTTGCGCTCTGGCCGTTCGGCGCACAGATCTACAGTCTGTAA

Upstream 100 bases:

>100_bases
TCACCGATTCCCCACATATCGCCCGCGTTCGCCTAATAGAATGGAATCCAGCATTCGATTCGGTATCCGGCGCAATGCCG
GCAAACGTGAGGAACTTACG

Downstream 100 bases:

>100_bases
CAATTGTTTCTGCAGTAAGTCCGGTGCAACGCATTATCATCGTGCGTTGCACCGGACTTTTTTATATACAACGGGCATTT
CACACACCGCGTGATTTGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MRVIGNILWIILGGLAIAISWTLIGLFLCITIIGIPLGVQAFKMAGLTLTPFGKTVQYGGGVGSTLANILWVVLVGWWMA
LGYLGAGVLNCITIIGIPFGIQSFKMAKLALWPFGAQIYSL

Sequences:

>Translated_121_residues
MRVIGNILWIILGGLAIAISWTLIGLFLCITIIGIPLGVQAFKMAGLTLTPFGKTVQYGGGVGSTLANILWVVLVGWWMA
LGYLGAGVLNCITIIGIPFGIQSFKMAKLALWPFGAQIYSL
>Mature_121_residues
MRVIGNILWIILGGLAIAISWTLIGLFLCITIIGIPLGVQAFKMAGLTLTPFGKTVQYGGGVGSTLANILWVVLVGWWMA
LGYLGAGVLNCITIIGIPFGIQSFKMAKLALWPFGAQIYSL

Specific function: Unknown

COG id: COG3304

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787195, Length=132, Percent_Identity=35.6060606060606, Blast_Score=88, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005185 [H]

Pfam domain/function: PF03733 DUF307 [H]

EC number: NA

Molecular weight: Translated: 12869; Mature: 12869

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVIGNILWIILGGLAIAISWTLIGLFLCITIIGIPLGVQAFKMAGLTLTPFGKTVQYGG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEECCCCCCCCCCC
GVGSTLANILWVVLVGWWMALGYLGAGVLNCITIIGIPFGIQSFKMAKLALWPFGAQIYS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHC
L
C
>Mature Secondary Structure
MRVIGNILWIILGGLAIAISWTLIGLFLCITIIGIPLGVQAFKMAGLTLTPFGKTVQYGG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEECCCCCCCCCCC
GVGSTLANILWVVLVGWWMALGYLGAGVLNCITIIGIPFGIQSFKMAKLALWPFGAQIYS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHC
L
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 2542273; 7984428 [H]