| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692551
Identifier: 213692551
GI number: 213692551
Start: 1835475
End: 1836740
Strand: Direct
Name: 213692551
Synonym: Blon_1683
Alternate gene names: NA
Gene position: 1835475-1836740 (Clockwise)
Preceding gene: 213692550
Following gene: 213692552
Centisome position: 64.79
GC content: 57.27
Gene sequence:
>1266_bases ATGGATATGAAGTATAGAAGTTTGGCAAGGCTGTTCCATGCCGACAGGTCAGTCGATTCCTTCAATAACCATGCGGCACT CGCACGGCAGCGGCTTGAGGCAGATTCCACATTCAGGACCGGGGTCATCACGCCATTGGGCGAGCTGTTCTCCGCCACGC CACGCGAGACGACCCTGCTCATGGAAAATATACTTCTCGCCGAAAGGCGCATATCACGGCTATGGAACCTGATTCCCGGC GTCATGCGCTGGGACTACATACGGCATTCCATCAGTGAGGAACTGTTCGCCACCAACGAGATGGAAGGCGTGCGCAGCAC CCGCAAGGAAACCCAGGACGCCGTGGACGCGGCCGACAAGGCAAGGAGGGACGGCGACGACTCCAAGGCGCGGTTCAGCG AATTTGCCAAGCTGTACCTGAACCTCACGGACAAGGACTCCGCGTTGCCGGCGGGCATCGCCGACATCCGCGACATCTAT GACCAGGTCGTGCTCGACGAAATCGATGAGAGCGATCAGCCGGACGGCGACCTGTTCCGGAAAGGCGATGTGGAAATACA GGGGCCGCACGGCCTCGCGATCCATAACGGAGTCAAAGGCGAAGGCAACATCGGCGCACTCCTCACCGATATGATCCATC TCGCGACCTCCGACGAGATTCCCCGGCTGCAGTCGGCCATCATGTCGCACTTCCTGTTCGAATACGTCCACCCGTTCTAC GACGGCAACGGCAGAACCGGCCGGTATCTCCTGGCCCTGTACCTGAACCATGACCTGACTATGCCCACCGTGCTATCCCT GTCCCGCACCATCGCGGAGAACAAGAACGCCTACTACAAAGCATTCATGGAGGCGGAGGACAAGCTGAACTGCGGCGAAC TCACGCTCTTCGTGAACACCATCCTCGGATTCATCCAACAAGCCCAGGATGAGCTGATTGACGAACTCAGTATCAAGGTC GATCAGCTCGACAAAGGTCGGATACTCTGTACACAGCTTGAAAAGAGGCATGCCCTATCGCGCAATGCCGTCTCGGTGCT CTATGGCGTGATTCAGGAAGAGCTGTTCGACTCGTCCAAATCCATGTCGTTGGACGAAGTGGCCCATCACATCGGACTAT CCAAACAGAGCGCAAGGAAATACGTGGAAGAGCTCTTGGCCGCGGGGCTGGTCGTACAGACCGGAAAACGTCCGCTGAAA ATACAGGTGGCGAAATCATTGAGGAATGTTCTCGCCACAGGAGCCGACGAGAACGCGGAAGCCTAA
Upstream 100 bases:
>100_bases TTGTATTATCCATGATTTTATAGTTGTTTATTGACTCATTTCCTTCTCTATCTTATACTTTTTATAATTAAGGATGCTCT TTGGGAAGTGAGTCTCTCTC
Downstream 100 bases:
>100_bases ATGAAGAAAGGTGGACGCAAACATCTCAACGAGGCCCATACTACGTGGAAAAGTCCGGGCAGCCAACACTGCTCGGACCT CTCTTTCATCGCTTTCCTCA
Product: filamentation induced by cAMP protein Fic
Products: NA
Alternate protein names: Fic Family Protein; Bacterial Regulatory Protein; Fic Protein; Transcriptional Regulator Fis Family; Regulatory Protein; Fic Protein Family Phage Protein; Fic Protein Family Protein
Number of amino acids: Translated: 421; Mature: 421
Protein sequence:
>421_residues MDMKYRSLARLFHADRSVDSFNNHAALARQRLEADSTFRTGVITPLGELFSATPRETTLLMENILLAERRISRLWNLIPG VMRWDYIRHSISEELFATNEMEGVRSTRKETQDAVDAADKARRDGDDSKARFSEFAKLYLNLTDKDSALPAGIADIRDIY DQVVLDEIDESDQPDGDLFRKGDVEIQGPHGLAIHNGVKGEGNIGALLTDMIHLATSDEIPRLQSAIMSHFLFEYVHPFY DGNGRTGRYLLALYLNHDLTMPTVLSLSRTIAENKNAYYKAFMEAEDKLNCGELTLFVNTILGFIQQAQDELIDELSIKV DQLDKGRILCTQLEKRHALSRNAVSVLYGVIQEELFDSSKSMSLDEVAHHIGLSKQSARKYVEELLAAGLVVQTGKRPLK IQVAKSLRNVLATGADENAEA
Sequences:
>Translated_421_residues MDMKYRSLARLFHADRSVDSFNNHAALARQRLEADSTFRTGVITPLGELFSATPRETTLLMENILLAERRISRLWNLIPG VMRWDYIRHSISEELFATNEMEGVRSTRKETQDAVDAADKARRDGDDSKARFSEFAKLYLNLTDKDSALPAGIADIRDIY DQVVLDEIDESDQPDGDLFRKGDVEIQGPHGLAIHNGVKGEGNIGALLTDMIHLATSDEIPRLQSAIMSHFLFEYVHPFY DGNGRTGRYLLALYLNHDLTMPTVLSLSRTIAENKNAYYKAFMEAEDKLNCGELTLFVNTILGFIQQAQDELIDELSIKV DQLDKGRILCTQLEKRHALSRNAVSVLYGVIQEELFDSSKSMSLDEVAHHIGLSKQSARKYVEELLAAGLVVQTGKRPLK IQVAKSLRNVLATGADENAEA >Mature_421_residues MDMKYRSLARLFHADRSVDSFNNHAALARQRLEADSTFRTGVITPLGELFSATPRETTLLMENILLAERRISRLWNLIPG VMRWDYIRHSISEELFATNEMEGVRSTRKETQDAVDAADKARRDGDDSKARFSEFAKLYLNLTDKDSALPAGIADIRDIY DQVVLDEIDESDQPDGDLFRKGDVEIQGPHGLAIHNGVKGEGNIGALLTDMIHLATSDEIPRLQSAIMSHFLFEYVHPFY DGNGRTGRYLLALYLNHDLTMPTVLSLSRTIAENKNAYYKAFMEAEDKLNCGELTLFVNTILGFIQQAQDELIDELSIKV DQLDKGRILCTQLEKRHALSRNAVSVLYGVIQEELFDSSKSMSLDEVAHHIGLSKQSARKYVEELLAAGLVVQTGKRPLK IQVAKSLRNVLATGADENAEA
Specific function: Unknown
COG id: COG3177
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47216; Mature: 47216
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDMKYRSLARLFHADRSVDSFNNHAALARQRLEADSTFRTGVITPLGELFSATPRETTLL CCCHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHCCCCHHCCCHHHHHHHHCCCCCHHHHH MENILLAERRISRLWNLIPGVMRWDYIRHSISEELFATNEMEGVRSTRKETQDAVDAADK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARRDGDDSKARFSEFAKLYLNLTDKDSALPAGIADIRDIYDQVVLDEIDESDQPDGDLFR HHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEE KGDVEIQGPHGLAIHNGVKGEGNIGALLTDMIHLATSDEIPRLQSAIMSHFLFEYVHPFY CCCEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC DGNGRTGRYLLALYLNHDLTMPTVLSLSRTIAENKNAYYKAFMEAEDKLNCGELTLFVNT CCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHH ILGFIQQAQDELIDELSIKVDQLDKGRILCTQLEKRHALSRNAVSVLYGVIQEELFDSSK HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SMSLDEVAHHIGLSKQSARKYVEELLAAGLVVQTGKRPLKIQVAKSLRNVLATGADENAE CCCHHHHHHHHCCCHHHHHHHHHHHHHCCHHHCCCCCCEEHHHHHHHHHHHHCCCCCCCC A C >Mature Secondary Structure MDMKYRSLARLFHADRSVDSFNNHAALARQRLEADSTFRTGVITPLGELFSATPRETTLL CCCHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHCCCCHHCCCHHHHHHHHCCCCCHHHHH MENILLAERRISRLWNLIPGVMRWDYIRHSISEELFATNEMEGVRSTRKETQDAVDAADK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARRDGDDSKARFSEFAKLYLNLTDKDSALPAGIADIRDIYDQVVLDEIDESDQPDGDLFR HHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEE KGDVEIQGPHGLAIHNGVKGEGNIGALLTDMIHLATSDEIPRLQSAIMSHFLFEYVHPFY CCCEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC DGNGRTGRYLLALYLNHDLTMPTVLSLSRTIAENKNAYYKAFMEAEDKLNCGELTLFVNT CCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHH ILGFIQQAQDELIDELSIKVDQLDKGRILCTQLEKRHALSRNAVSVLYGVIQEELFDSSK HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SMSLDEVAHHIGLSKQSARKYVEELLAAGLVVQTGKRPLKIQVAKSLRNVLATGADENAE CCCHHHHHHHHCCCHHHHHHHHHHHHHCCHHHCCCCCCEEHHHHHHHHHHHHCCCCCCCC A C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA