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The map label for this gene is ydaV [C]

Identifier: 213692540

GI number: 213692540

Start: 1824553

End: 1826778

Strand: Reverse

Name: ydaV [C]

Synonym: Blon_1672

Alternate gene names: 213692540

Gene position: 1826778-1824553 (Counterclockwise)

Preceding gene: 213692541

Following gene: 213692536

Centisome position: 64.49

GC content: 67.61

Gene sequence:

>2226_bases
ATGATCAGCATGCCCCAAATACAGTCTATCCGTTCGCGTCGCAGGAACGGTGAGTCCATCGCCTCGATAGCGCGCAGCGA
GAGGGTCAGCGAGCCGACCGTGCGCAAGTATCTGAGGGTCGACGACCTATCGGCCAGGCCGCCCGTGAGGCGACGTCGTG
GTTCGGTGATCGACGAGTGGCTGCCCATGATCGAGGGCATGCTCGCCGAGGACCGGGAGACCTGGCGCAAGCAGCGGCAT
ACCGCGACCCGCATCCATGAGCGGTTGCGCGACGAGTACGGGGCCGGGGTGTCGTTGTCGACGGTGACCCGGACCGTGGC
GCGGCTCAGGCGCGAGGCCGCGGCGGAGCGGGAGGCCGGTTTCCTGGACCTGTCGTGGCATCCGGGCGAATGCCAGGCGG
ACTTCGGCCAGGTCGACGTGCGCTACCGGGGCGTCGTGACGCGAATGCGGCATTTCGTGTTGGATTTCCCGTACTCGAAC
ATCGGGCCGAGCCAGCTGATGCCCGGGGAGAACGCGGAGTGCACGTGCCAGGCCCTCAGGAACCTATTCGAATGGCTGGG
CGGGGTGCCCGAACGCATCGTGTATGACAACGCCGCCGGCGTCGGACGCAAATGGTTCGACAGGATCCGCCTGACCCGCC
TGTTCCAGGCGTTCCAGGCGCACTACGGGTTCGAGTACACGTTCTGCAACCCGTACTCGGGACACGAGAAGGGCGGCGTC
GAGGCCCGGGTCGGGGCCGTGCGCCGCAGGCTGTTCGTGCCGGTGCCCGGCGTATGGAACCTCGACAGCTTCAACCTGCG
CCTGCCCGGCCGCTGCCTCGAACTGGGGGACAAGGACCACTACAGGAAGGGCGAGAGCCAGACCGGCCTGTTCGACGAGG
ACCGAAAGGCGCTGCTGCCCCTGCCCGCCAAGCCGTTCGACGTGGTCACGTGGACGAGGATGAAGGCCGACAAATACGGC
AACATCACCGTCCAGGGCCGCCACCGGTACGCGGCCGGGCCCGAACACGCCGGCCATGAGATGATCGTCGGCCTGAGGGC
CCTGGAGGTGGAGATCCTCGATGCCGAAGGCAAACGCGTGGTCACGCATCCGAGGTCCTACGGGGACAAGCCGACCGACA
GCGGCGACCCGTCGAGCCAGCTCGGGCTGTTGTGCGACCGGCCGGCGGCCTGGCGCAACAGCCGGGTGCGCGACGCGATG
CCCGACCCGCTTCGCGAATGGATCGACGCGCAGGACGAGGCCACGCGGCGCGACAGCCTGCGTGCCCTGCTGCACGCCGA
CGGCGAGAGCGGCTGGCGGGCGGCCGTGGCCGGCATGCCCGGTGATCCTCGAATCCACCGGAGGCACGGACCGGGCCGGG
GTATGTCTGGCCGCGGCACGCCACGCCTCGGGCCTGGGACCCGTGGCCTACGACGACCCCGTGGACCTGAGCGAATACGA
CATCGCCTACACCAAGGAGGACGAGTGAACCAGAAGAACGGACGGACCGACCCCGGCCCGCTGCGCGAGCGGGCGAGGAG
CCTGTTCATCTCCAAGGCCACCATCGACGAAACGCTCGAATGGGCCACGCCCCGCCAACTGGACGCCATCGACCGCATGC
TCGCCACGGAACTGGCCAACAGGGAGGCCTCCAAACGGGCAAGGCTCATGCGCCAGGCCCGGTTCCCGGTGCCCAAAAGC
CTCGACGGCTACGACTTCGCGAACGTGCGCCTGCCCGACGGATATACCAAGGAGCAGCTGACCGGCCTCGATTTCGCGGC
CAAGGCGCAGGACCTCGTGTTCTACGGCAAGACGGGACGCGGAAAGACCCACCTGGCCACCGCCCTGGGCATGCTCGCCA
TCGAGCAAGGCAGGAGCGTGAGGTTCCGGCAGACCGCGGAGCTCGTGCTCCAGCTCGGCAAGGCCAAACGCGACGGCGCC
CTCGACAGCCTGCTCAGGGACCTCGCCCGTGCCGACCTGATCATCCTCGACGAGTTCGGCTACGCGCCCGTGCGCCTCGA
CGGGGCCCGTCTCCTCTACCAGATCATCGCCGGCAGCTACGAACGTCGCAGCATCATCTTCACCACGAACATCGAGTTCA
GCAAATGGGGGACGATCTTCGCCGACGACAAACTCGCCGCCGCGATCATCGACCGCATCGTCCACCACGGACGCCTCATC
GAATTCACCAGCCCCAGCCGACGCGTCAGCCAAGCCCTCATGTTCGGCAAGACGGACAACCAGTAA

Upstream 100 bases:

>100_bases
ACGAAGGTTTTTCGGGTTTAGGCGGAAAGGCATGCCGACCACCCGTGGGCCTTAGCCTGATGGTGCTTCTAGTTCCATTC
GGGAAAGGTCCGGAAAGGCA

Downstream 100 bases:

>100_bases
AACAAACCACCGGCCGGCACTCCTCATGCCGAAAACCGAAAAAAATTAGTGACGAAACACGAAACACCGACTTGACTAAA
AACAGGCGGAGCATGCAGCC

Product: IstB domain protein ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 741; Mature: 741

Protein sequence:

>741_residues
MISMPQIQSIRSRRRNGESIASIARSERVSEPTVRKYLRVDDLSARPPVRRRRGSVIDEWLPMIEGMLAEDRETWRKQRH
TATRIHERLRDEYGAGVSLSTVTRTVARLRREAAAEREAGFLDLSWHPGECQADFGQVDVRYRGVVTRMRHFVLDFPYSN
IGPSQLMPGENAECTCQALRNLFEWLGGVPERIVYDNAAGVGRKWFDRIRLTRLFQAFQAHYGFEYTFCNPYSGHEKGGV
EARVGAVRRRLFVPVPGVWNLDSFNLRLPGRCLELGDKDHYRKGESQTGLFDEDRKALLPLPAKPFDVVTWTRMKADKYG
NITVQGRHRYAAGPEHAGHEMIVGLRALEVEILDAEGKRVVTHPRSYGDKPTDSGDPSSQLGLLCDRPAAWRNSRVRDAM
PDPLREWIDAQDEATRRDSLRALLHADGESGWRAAVAGMPGDPRIHRRHGPGRGMSGRGTPRLGPGTRGLRRPRGPERIR
HRLHQGGRVNQKNGRTDPGPLRERARSLFISKATIDETLEWATPRQLDAIDRMLATELANREASKRARLMRQARFPVPKS
LDGYDFANVRLPDGYTKEQLTGLDFAAKAQDLVFYGKTGRGKTHLATALGMLAIEQGRSVRFRQTAELVLQLGKAKRDGA
LDSLLRDLARADLIILDEFGYAPVRLDGARLLYQIIAGSYERRSIIFTTNIEFSKWGTIFADDKLAAAIIDRIVHHGRLI
EFTSPSRRVSQALMFGKTDNQ

Sequences:

>Translated_741_residues
MISMPQIQSIRSRRRNGESIASIARSERVSEPTVRKYLRVDDLSARPPVRRRRGSVIDEWLPMIEGMLAEDRETWRKQRH
TATRIHERLRDEYGAGVSLSTVTRTVARLRREAAAEREAGFLDLSWHPGECQADFGQVDVRYRGVVTRMRHFVLDFPYSN
IGPSQLMPGENAECTCQALRNLFEWLGGVPERIVYDNAAGVGRKWFDRIRLTRLFQAFQAHYGFEYTFCNPYSGHEKGGV
EARVGAVRRRLFVPVPGVWNLDSFNLRLPGRCLELGDKDHYRKGESQTGLFDEDRKALLPLPAKPFDVVTWTRMKADKYG
NITVQGRHRYAAGPEHAGHEMIVGLRALEVEILDAEGKRVVTHPRSYGDKPTDSGDPSSQLGLLCDRPAAWRNSRVRDAM
PDPLREWIDAQDEATRRDSLRALLHADGESGWRAAVAGMPGDPRIHRRHGPGRGMSGRGTPRLGPGTRGLRRPRGPERIR
HRLHQGGRVNQKNGRTDPGPLRERARSLFISKATIDETLEWATPRQLDAIDRMLATELANREASKRARLMRQARFPVPKS
LDGYDFANVRLPDGYTKEQLTGLDFAAKAQDLVFYGKTGRGKTHLATALGMLAIEQGRSVRFRQTAELVLQLGKAKRDGA
LDSLLRDLARADLIILDEFGYAPVRLDGARLLYQIIAGSYERRSIIFTTNIEFSKWGTIFADDKLAAAIIDRIVHHGRLI
EFTSPSRRVSQALMFGKTDNQ
>Mature_741_residues
MISMPQIQSIRSRRRNGESIASIARSERVSEPTVRKYLRVDDLSARPPVRRRRGSVIDEWLPMIEGMLAEDRETWRKQRH
TATRIHERLRDEYGAGVSLSTVTRTVARLRREAAAEREAGFLDLSWHPGECQADFGQVDVRYRGVVTRMRHFVLDFPYSN
IGPSQLMPGENAECTCQALRNLFEWLGGVPERIVYDNAAGVGRKWFDRIRLTRLFQAFQAHYGFEYTFCNPYSGHEKGGV
EARVGAVRRRLFVPVPGVWNLDSFNLRLPGRCLELGDKDHYRKGESQTGLFDEDRKALLPLPAKPFDVVTWTRMKADKYG
NITVQGRHRYAAGPEHAGHEMIVGLRALEVEILDAEGKRVVTHPRSYGDKPTDSGDPSSQLGLLCDRPAAWRNSRVRDAM
PDPLREWIDAQDEATRRDSLRALLHADGESGWRAAVAGMPGDPRIHRRHGPGRGMSGRGTPRLGPGTRGLRRPRGPERIR
HRLHQGGRVNQKNGRTDPGPLRERARSLFISKATIDETLEWATPRQLDAIDRMLATELANREASKRARLMRQARFPVPKS
LDGYDFANVRLPDGYTKEQLTGLDFAAKAQDLVFYGKTGRGKTHLATALGMLAIEQGRSVRFRQTAELVLQLGKAKRDGA
LDSLLRDLARADLIILDEFGYAPVRLDGARLLYQIIAGSYERRSIIFTTNIEFSKWGTIFADDKLAAAIIDRIVHHGRLI
EFTSPSRRVSQALMFGKTDNQ

Specific function: Unknown

COG id: COG4584

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IS21/IS1162 putative ATP-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR001270
- InterPro:   IPR002611 [H]

Pfam domain/function: PF01695 IstB [H]

EC number: NA

Molecular weight: Translated: 83812; Mature: 83812

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISMPQIQSIRSRRRNGESIASIARSERVSEPTVRKYLRVDDLSARPPVRRRRGSVIDEW
CCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHCCHHHHH
LPMIEGMLAEDRETWRKQRHTATRIHERLRDEYGAGVSLSTVTRTVARLRREAAAEREAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC
FLDLSWHPGECQADFGQVDVRYRGVVTRMRHFVLDFPYSNIGPSQLMPGENAECTCQALR
EEEECCCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHH
NLFEWLGGVPERIVYDNAAGVGRKWFDRIRLTRLFQAFQAHYGFEYTFCNPYSGHEKGGV
HHHHHHCCCCHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCC
EARVGAVRRRLFVPVPGVWNLDSFNLRLPGRCLELGDKDHYRKGESQTGLFDEDRKALLP
HHHHHHHHHHHEECCCCCCCCCCCCEECCCHHHHCCCCHHHCCCCCCCCCCCCCCCCCCC
LPAKPFDVVTWTRMKADKYGNITVQGRHRYAAGPEHAGHEMIVGLRALEVEILDAEGKRV
CCCCCCCEEEEEHHHCCCCCCEEEECCCCCCCCCCCCCCHHHEEEEEEEEEEECCCCCEE
VTHPRSYGDKPTDSGDPSSQLGLLCDRPAAWRNSRVRDAMPDPLREWIDAQDEATRRDSL
EECCHHCCCCCCCCCCCCHHCCCEECCCCHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHH
RALLHADGESGWRAAVAGMPGDPRIHRRHGPGRGMSGRGTPRLGPGTRGLRRPRGPERIR
HHHHHCCCCCCCEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
HRLHQGGRVNQKNGRTDPGPLRERARSLFISKATIDETLEWATPRQLDAIDRMLATELAN
HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
REASKRARLMRQARFPVPKSLDGYDFANVRLPDGYTKEQLTGLDFAAKAQDLVFYGKTGR
HHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCHHHHCCCCHHHCCCCEEEECCCCC
GKTHLATALGMLAIEQGRSVRFRQTAELVLQLGKAKRDGALDSLLRDLARADLIILDEFG
CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCEEEEECCC
YAPVRLDGARLLYQIIAGSYERRSIIFTTNIEFSKWGTIFADDKLAAAIIDRIVHHGRLI
CCCEEECHHHHHHHHHHCCCCCCEEEEEECCCHHHCCCEEECCHHHHHHHHHHHHCCEEE
EFTSPSRRVSQALMFGKTDNQ
EECCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MISMPQIQSIRSRRRNGESIASIARSERVSEPTVRKYLRVDDLSARPPVRRRRGSVIDEW
CCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHCCHHHHH
LPMIEGMLAEDRETWRKQRHTATRIHERLRDEYGAGVSLSTVTRTVARLRREAAAEREAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC
FLDLSWHPGECQADFGQVDVRYRGVVTRMRHFVLDFPYSNIGPSQLMPGENAECTCQALR
EEEECCCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHH
NLFEWLGGVPERIVYDNAAGVGRKWFDRIRLTRLFQAFQAHYGFEYTFCNPYSGHEKGGV
HHHHHHCCCCHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCC
EARVGAVRRRLFVPVPGVWNLDSFNLRLPGRCLELGDKDHYRKGESQTGLFDEDRKALLP
HHHHHHHHHHHEECCCCCCCCCCCCEECCCHHHHCCCCHHHCCCCCCCCCCCCCCCCCCC
LPAKPFDVVTWTRMKADKYGNITVQGRHRYAAGPEHAGHEMIVGLRALEVEILDAEGKRV
CCCCCCCEEEEEHHHCCCCCCEEEECCCCCCCCCCCCCCHHHEEEEEEEEEEECCCCCEE
VTHPRSYGDKPTDSGDPSSQLGLLCDRPAAWRNSRVRDAMPDPLREWIDAQDEATRRDSL
EECCHHCCCCCCCCCCCCHHCCCEECCCCHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHH
RALLHADGESGWRAAVAGMPGDPRIHRRHGPGRGMSGRGTPRLGPGTRGLRRPRGPERIR
HHHHHCCCCCCCEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
HRLHQGGRVNQKNGRTDPGPLRERARSLFISKATIDETLEWATPRQLDAIDRMLATELAN
HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
REASKRARLMRQARFPVPKSLDGYDFANVRLPDGYTKEQLTGLDFAAKAQDLVFYGKTGR
HHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCHHHHCCCCHHHCCCCEEEECCCCC
GKTHLATALGMLAIEQGRSVRFRQTAELVLQLGKAKRDGALDSLLRDLARADLIILDEFG
CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCEEEEECCC
YAPVRLDGARLLYQIIAGSYERRSIIFTTNIEFSKWGTIFADDKLAAAIIDRIVHHGRLI
CCCEEECHHHHHHHHHHCCCCCCEEEEEECCCHHHCCCEEECCHHHHHHHHHHHHCCEEE
EFTSPSRRVSQALMFGKTDNQ
EECCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2174857 [H]