Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is 213692511

Identifier: 213692511

GI number: 213692511

Start: 1795883

End: 1796464

Strand: Reverse

Name: 213692511

Synonym: Blon_1643

Alternate gene names: NA

Gene position: 1796464-1795883 (Counterclockwise)

Preceding gene: 213692512

Following gene: 213692510

Centisome position: 63.42

GC content: 58.93

Gene sequence:

>582_bases
ATGCGCGTATTCGATTTTGACGGAACCATCTACGACGGCGAAAGCCTGTTCGACCTGTACCTGTATTCCGCCCGACACGA
CCCGAAGGTGTTCCGTTTCATCGCACCCGTGCTGCGGTACGCGGTCAAATACAAACTCGGGCGGGCCACGCTTGAGCAGA
TGGAATACGGCGTGGGCAGAATGGCCGAAGGCTATCTTACGGAACTGAACCGTTCCCGACGCGTGGCGAGCGTCGAACAG
CTCGTGAACGATTTCTGGGATCGGAACTACCCGCGCATCAAGCCCTGGTACCAGCCCGAACCGGATGACGTGATCCTCAC
CGCATCCTTCGATTTGACGGTGGGGGAGGCCTGCCGCAGGCTCGGCGTGCGGAACCTCGTGGCCAGCAAGGTCGATTTGG
AGACGATGAGGGTTACGTATCTCAACTTCAACACCAACAAGGCCAGGCGATTCCGCGAGCTGTACGGTCCGGACGCCGTC
GTCGACGAGTTCTACACCGACTCGAAGTTCGACCAGCCGATGATCGATATGGCCCGTCGCGCGTTCATGGTCAAAGGGGA
CACCATAACGCGGGTGAAATAG

Upstream 100 bases:

>100_bases
CCAAAAACAGTGTTCATGTGAAATTCACCGCATATTCGCGCTTTTGCCGGTCCGCCATGATTAGCCTTGAACAAGGAACA
GCAGAGTAGAAGCAGAAGGT

Downstream 100 bases:

>100_bases
CGGACGGCGCGGAACAACGCGACGTCACCGACAACGAAGGAGGAGCGCAGATGAGCATGCCGCTCGATCTATATGTAATC
CGACATGGCGAATCCGAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MRVFDFDGTIYDGESLFDLYLYSARHDPKVFRFIAPVLRYAVKYKLGRATLEQMEYGVGRMAEGYLTELNRSRRVASVEQ
LVNDFWDRNYPRIKPWYQPEPDDVILTASFDLTVGEACRRLGVRNLVASKVDLETMRVTYLNFNTNKARRFRELYGPDAV
VDEFYTDSKFDQPMIDMARRAFMVKGDTITRVK

Sequences:

>Translated_193_residues
MRVFDFDGTIYDGESLFDLYLYSARHDPKVFRFIAPVLRYAVKYKLGRATLEQMEYGVGRMAEGYLTELNRSRRVASVEQ
LVNDFWDRNYPRIKPWYQPEPDDVILTASFDLTVGEACRRLGVRNLVASKVDLETMRVTYLNFNTNKARRFRELYGPDAV
VDEFYTDSKFDQPMIDMARRAFMVKGDTITRVK
>Mature_193_residues
MRVFDFDGTIYDGESLFDLYLYSARHDPKVFRFIAPVLRYAVKYKLGRATLEQMEYGVGRMAEGYLTELNRSRRVASVEQ
LVNDFWDRNYPRIKPWYQPEPDDVILTASFDLTVGEACRRLGVRNLVASKVDLETMRVTYLNFNTNKARRFRELYGPDAV
VDEFYTDSKFDQPMIDMARRAFMVKGDTITRVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22662; Mature: 22662

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVFDFDGTIYDGESLFDLYLYSARHDPKVFRFIAPVLRYAVKYKLGRATLEQMEYGVGR
CEEECCCCCEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
MAEGYLTELNRSRRVASVEQLVNDFWDRNYPRIKPWYQPEPDDVILTASFDLTVGEACRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHH
LGVRNLVASKVDLETMRVTYLNFNTNKARRFRELYGPDAVVDEFYTDSKFDQPMIDMARR
HHHHHHHHHHHCCEEEEEEEEECCCHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHH
AFMVKGDTITRVK
HEEECCCEEECCC
>Mature Secondary Structure
MRVFDFDGTIYDGESLFDLYLYSARHDPKVFRFIAPVLRYAVKYKLGRATLEQMEYGVGR
CEEECCCCCEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
MAEGYLTELNRSRRVASVEQLVNDFWDRNYPRIKPWYQPEPDDVILTASFDLTVGEACRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHH
LGVRNLVASKVDLETMRVTYLNFNTNKARRFRELYGPDAVVDEFYTDSKFDQPMIDMARR
HHHHHHHHHHHCCEEEEEEEEECCCHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHH
AFMVKGDTITRVK
HEEECCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA