| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692512
Identifier: 213692512
GI number: 213692512
Start: 1796591
End: 1797961
Strand: Reverse
Name: 213692512
Synonym: Blon_1644
Alternate gene names: NA
Gene position: 1797961-1796591 (Counterclockwise)
Preceding gene: 213692514
Following gene: 213692511
Centisome position: 63.47
GC content: 64.62
Gene sequence:
>1371_bases ATGCCCGTGACGTCCGATGGGGTGGGCGGGCCCGGCGCGTATGCCGAGGCCATGGCGAGCGAGGAGGCCGATGCCGCGTG GATCCGGCGTGTGGCGTTGCTGCTCGTCGGTCAGGCGTTTTCGCTGTTGGGCTCCAGCATCGTGCAGTACGCCATCTGGT GGTGGATCGTATTGCAGACCAGAACCGGTTCGGCGATGCTGCTGGCCACCCTGTTCGGCGTGGTGCCGCAGGCCGTGGTC TCGATCTTCGGCGGCTCATGGGCGGACCGCCATAATCGCAAACTGCTGATCATGCTGCCGGACATGGTGATCGCCGCCGT CACCGTCGTGTTGTCGTTGGGTTTCGCGATGGGATGGGCCGGACTGGCCACGATCTTCGTGGTGCTGCTCATCCGTTCGG CGGGCGGCGGCATCCAGACGCCGGCCGTGCAGTCGTTCATCCCGGACGTCGTGCCCTCCGGCAAACTGCTGCGCGTCAAT TCGGTATACGGTGTGATCAACTCGGCGAACATGATAGTGGCACCGGCTGTGGCCGCCGTGCTCATCAACATGGTGCCGTT GTGGTCGATCCTGCTGATCGACGTGACCACGGCGGTCATCGGCGTCGGGTTCGTGGCGTTGATCAAGGTGCCGAAGAGAC GCGCGACGGCGGAGCGTGCCGCGCACGCCGTGTCCGAAGGGGAGGGACGCTCGCCGCTCGCCGGCGTCCGCCGTGTCTTC GCCGATCTCAAGGTGGGATTCGACTACACGTGGCGTCGGCCGAATCTGCGCAACGTGGTGTTGGGCGACGCGCTGACCTG TTTCATCGCCGTTGCCCCGATGAATCTGACCCTGCTGCTCATGACCCGCGAATACGAGGGAATCGATCTGAATCTGGGAT TCATCAACCTGACCACCGCCTCCGACAAACTCGCGGCCAATGAGCTGGGATGGAGCATCGGCATGTTGCTTGGCGGCGCG TTCATGTCCACCGTCGGGGCCAAGGTCGTGCGCGACAACATGCGCATGGTCGCGCTCGGCGTCACTTTGGTCGGCGTGAC CGTGGTGGGTCTCGGGGTCGCGCCCAATCTGCTGGCGTACCTGTTTGTCGACGTGGCGAATGGCGTCGCCTCCGCCATCT GCGTGGGTCCGATGCGTACCATCATGCAAACCGAGTCCGATGAGAATGTGGTCGGCCGCGTCTTTGGTCTCGACACCACG CTCAGCACGCTGGGCATGCCGCTGGGCATGCTGGTCTTCGCGCCTCTGGCCGACATGATTCCGATTTCGCTGGTGTTCGT CATCGGCGGTGTGCTGACCTTGCCCATCGGCATCTACCTGTTCGGCCAGACGCGCAGGCGTGCCGGAACGGTGCCGGACC GGGGACGATGA
Upstream 100 bases:
>100_bases ATCAGACCTCCATTCTATGGTACTGGTGTGAGGTGAAGCGGGGCCGGGACCAGGCCCATGCGCCTTGAAGCGCCGAGTAG ACGAGTAGATTGGAGCGACC
Downstream 100 bases:
>100_bases CCGCCGGGGAAGTTGGTTGCGACCCTCCAAAAACAGTGTTCATGTGAAATTCACCGCATATTCGCGCTTTTGCCGGTCCG CCATGATTAGCCTTGAACAA
Product: major facilitator superfamily MFS_1
Products: NA
Alternate protein names: Macrolide-Efflux Protein; Facilitator Superfamily Transporter; Transporter Facilitator Family; Facilitator Superfamily Protein; H+ Antiporter Protein; Permease; Non-Ribosomal Peptide Synthetase-Like Protein; Multidrug Resistance Protein; Efflux Transporter Protein; Permease Of Facilitator Superfamily Protein; Facilitator Family Transporter; Amino Acid Adenylation Domain-Containing Protein; Amino Acid Adenylation Domain Protein; MFS Family Transporter Protein; MFS Transporter Macrolide Efflux Protein; Macrolide-Efflux Determinant; MFS Permease; Macrolide Efflux Pump; Multidrug Transporter; Macrolide-Efflux Pump; Macrolide Efflux Protein; Facilitator Family Protein; ABC Transporter Permease Protein; Macrolide-Efflux Transmembrane Protein
Number of amino acids: Translated: 456; Mature: 455
Protein sequence:
>456_residues MPVTSDGVGGPGAYAEAMASEEADAAWIRRVALLLVGQAFSLLGSSIVQYAIWWWIVLQTRTGSAMLLATLFGVVPQAVV SIFGGSWADRHNRKLLIMLPDMVIAAVTVVLSLGFAMGWAGLATIFVVLLIRSAGGGIQTPAVQSFIPDVVPSGKLLRVN SVYGVINSANMIVAPAVAAVLINMVPLWSILLIDVTTAVIGVGFVALIKVPKRRATAERAAHAVSEGEGRSPLAGVRRVF ADLKVGFDYTWRRPNLRNVVLGDALTCFIAVAPMNLTLLLMTREYEGIDLNLGFINLTTASDKLAANELGWSIGMLLGGA FMSTVGAKVVRDNMRMVALGVTLVGVTVVGLGVAPNLLAYLFVDVANGVASAICVGPMRTIMQTESDENVVGRVFGLDTT LSTLGMPLGMLVFAPLADMIPISLVFVIGGVLTLPIGIYLFGQTRRRAGTVPDRGR
Sequences:
>Translated_456_residues MPVTSDGVGGPGAYAEAMASEEADAAWIRRVALLLVGQAFSLLGSSIVQYAIWWWIVLQTRTGSAMLLATLFGVVPQAVV SIFGGSWADRHNRKLLIMLPDMVIAAVTVVLSLGFAMGWAGLATIFVVLLIRSAGGGIQTPAVQSFIPDVVPSGKLLRVN SVYGVINSANMIVAPAVAAVLINMVPLWSILLIDVTTAVIGVGFVALIKVPKRRATAERAAHAVSEGEGRSPLAGVRRVF ADLKVGFDYTWRRPNLRNVVLGDALTCFIAVAPMNLTLLLMTREYEGIDLNLGFINLTTASDKLAANELGWSIGMLLGGA FMSTVGAKVVRDNMRMVALGVTLVGVTVVGLGVAPNLLAYLFVDVANGVASAICVGPMRTIMQTESDENVVGRVFGLDTT LSTLGMPLGMLVFAPLADMIPISLVFVIGGVLTLPIGIYLFGQTRRRAGTVPDRGR >Mature_455_residues PVTSDGVGGPGAYAEAMASEEADAAWIRRVALLLVGQAFSLLGSSIVQYAIWWWIVLQTRTGSAMLLATLFGVVPQAVVS IFGGSWADRHNRKLLIMLPDMVIAAVTVVLSLGFAMGWAGLATIFVVLLIRSAGGGIQTPAVQSFIPDVVPSGKLLRVNS VYGVINSANMIVAPAVAAVLINMVPLWSILLIDVTTAVIGVGFVALIKVPKRRATAERAAHAVSEGEGRSPLAGVRRVFA DLKVGFDYTWRRPNLRNVVLGDALTCFIAVAPMNLTLLLMTREYEGIDLNLGFINLTTASDKLAANELGWSIGMLLGGAF MSTVGAKVVRDNMRMVALGVTLVGVTVVGLGVAPNLLAYLFVDVANGVASAICVGPMRTIMQTESDENVVGRVFGLDTTL STLGMPLGMLVFAPLADMIPISLVFVIGGVLTLPIGIYLFGQTRRRAGTVPDRGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48147; Mature: 48016
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVTSDGVGGPGAYAEAMASEEADAAWIRRVALLLVGQAFSLLGSSIVQYAIWWWIVLQT CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE RTGSAMLLATLFGVVPQAVVSIFGGSWADRHNRKLLIMLPDMVIAAVTVVLSLGFAMGWA CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHH GLATIFVVLLIRSAGGGIQTPAVQSFIPDVVPSGKLLRVNSVYGVINSANMIVAPAVAAV HHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCEEEEEHHHHHHCCCCCHHHHHHHHH LINMVPLWSILLIDVTTAVIGVGFVALIKVPKRRATAERAAHAVSEGEGRSPLAGVRRVF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH ADLKVGFDYTWRRPNLRNVVLGDALTCFIAVAPMNLTLLLMTREYEGIDLNLGFINLTTA HHHHCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEEEEEEEECC SDKLAANELGWSIGMLLGGAFMSTVGAKVVRDNMRMVALGVTLVGVTVVGLGVAPNLLAY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHH LFVDVANGVASAICVGPMRTIMQTESDENVVGRVFGLDTTLSTLGMPLGMLVFAPLADMI HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHH PISLVFVIGGVLTLPIGIYLFGQTRRRAGTVPDRGR HHHHHHHHHHHHHHHHHHEEECCCHHHCCCCCCCCC >Mature Secondary Structure PVTSDGVGGPGAYAEAMASEEADAAWIRRVALLLVGQAFSLLGSSIVQYAIWWWIVLQT CCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE RTGSAMLLATLFGVVPQAVVSIFGGSWADRHNRKLLIMLPDMVIAAVTVVLSLGFAMGWA CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHH GLATIFVVLLIRSAGGGIQTPAVQSFIPDVVPSGKLLRVNSVYGVINSANMIVAPAVAAV HHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCEEEEEHHHHHHCCCCCHHHHHHHHH LINMVPLWSILLIDVTTAVIGVGFVALIKVPKRRATAERAAHAVSEGEGRSPLAGVRRVF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH ADLKVGFDYTWRRPNLRNVVLGDALTCFIAVAPMNLTLLLMTREYEGIDLNLGFINLTTA HHHHCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEEEEEEEECC SDKLAANELGWSIGMLLGGAFMSTVGAKVVRDNMRMVALGVTLVGVTVVGLGVAPNLLAY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHH LFVDVANGVASAICVGPMRTIMQTESDENVVGRVFGLDTTLSTLGMPLGMLVFAPLADMI HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHH PISLVFVIGGVLTLPIGIYLFGQTRRRAGTVPDRGR HHHHHHHHHHHHHHHHHHEEECCCHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA