Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is malZ [C]

Identifier: 213692507

GI number: 213692507

Start: 1788731

End: 1790026

Strand: Direct

Name: malZ [C]

Synonym: Blon_1636

Alternate gene names: 213692507

Gene position: 1788731-1790026 (Clockwise)

Preceding gene: 213692504

Following gene: 213692513

Centisome position: 63.14

GC content: 62.11

Gene sequence:

>1296_bases
GTGGTTGTAAGCACGGATTCGAGCCGCACAATGCCCGATTGGGTGAAGTACGGGGTGTTCTGGCACGTGTATCCGCTGGG
CTTCTGCGGTGCCGATATCAGGCCCGCCGGCCCGCGCCAGTTCCATGGCCGCGGCCTTGACGCGATGATCCCTTGGCTGG
AGTACGTGCGCGATCTAGGCGCGTCCGGCCTGCTGCTGGGTCCGGTGTTCGAGTCGGCGACGCATGGATACGACACGCTT
GACCATATGCACATCGATGTGCGATTGGGCGGGGATGCCGCGTTCGACCAGCTGATTGCGGCCTGCCGGGACATGGGATT
GCAGGTGGTGCTGGATGGCGTGTTCAATCATGTGAGCCGCGATCATCCGGCCGTCCGGGCGGCGCTTGACGAGACCACCG
GACGCTTGAATCCGGCCGACAACCCGTGGCATGGTCTGGTCCGCGCGCATGTCGGCGATAATGACGAACCCGCTTTGGAT
GTGTTCGAGGGGCACGGGGATCTGGTGGCGCTGGACCATTCGGCTGACGAGACCGTTGACTATGTGGTCCATGTGATGAG
CCATTGGCTGGATCGCGGAGCCGCCGGCTGGCGCCTCGACGCCGCGTATGCCGTGCCGAGCCCGTTCTGGGCGCGCGTGT
TGCCGCAGGTCAAAGCCGCACACCCGTATTCGTGGATTTTCGGTGAGGTGATCCATGGCGATTACCCGCGCATCATCGAG
GAATCCACGATGGATTCGATCACGCAATACGAGCTATGGAAGTCGATCCAGCATGCGCTGGAGACGGAGAACTTCTTCGA
GCTGGATTGGAATCTCAAGCGGCACAACGCGTTCCTGAATTCCTTCGTGCCGCAGACGTTCATCGGCAACCATGACGTGA
CGCGTATCGCATCGCAGATTGGCCCGGCCAAGGCGGCGTTGGCATTGGCGGTGCTCATGACGGTCGGCGGCGTGCCAAGC
ATCTATTACGGCGACGAGCAGGGCTATGTGGGCGTCAAGCAGGAGCGTTTCGGCGGCGATGACGACGTACGTCCGAAGTT
CCCCGACTCCCCTGCCGAACTGTCCACGCTGGGAGAGCCGACATACCGACTGCACCAGGCGCTGATCGCGCTGCGCCGTC
GCAACCCATGGCTGATGGATGCGCGTACCGAGGCCGTGAAGCTGGAAAACAAGCACTTCGTCTATCGTTCGACGAGCGCC
GACGCCCAGCATTCCCTGACCGTGGACCTCAACATCGAGCAATCCCCCACTTTCACCATCCGCAACGCCGACGGCAGTAC
AGCGTATCAATACTGA

Upstream 100 bases:

>100_bases
ATGCTTCGATTCGGCGCCTGCATCGACAACTCTCGTCATCTACCGAGGATTCGGTCATGCGTGTGCGAAAATGGACACGG
TGTCAATCAGGAGGTGCACA

Downstream 100 bases:

>100_bases
GCTACCTCATCAGAGGGAGCTCATCATTTACCGCCGAATGCCTCGGATCAGCAGGTCGAGCAGGTACCCGTACGACCGGT
CGACCCGTTCGCGGCCGCGT

Product: alpha amylase, catalytic region

Products: NA

Alternate protein names: Glucan 1,4-alpha-maltohydrolase [H]

Number of amino acids: Translated: 431; Mature: 431

Protein sequence:

>431_residues
MVVSTDSSRTMPDWVKYGVFWHVYPLGFCGADIRPAGPRQFHGRGLDAMIPWLEYVRDLGASGLLLGPVFESATHGYDTL
DHMHIDVRLGGDAAFDQLIAACRDMGLQVVLDGVFNHVSRDHPAVRAALDETTGRLNPADNPWHGLVRAHVGDNDEPALD
VFEGHGDLVALDHSADETVDYVVHVMSHWLDRGAAGWRLDAAYAVPSPFWARVLPQVKAAHPYSWIFGEVIHGDYPRIIE
ESTMDSITQYELWKSIQHALETENFFELDWNLKRHNAFLNSFVPQTFIGNHDVTRIASQIGPAKAALALAVLMTVGGVPS
IYYGDEQGYVGVKQERFGGDDDVRPKFPDSPAELSTLGEPTYRLHQALIALRRRNPWLMDARTEAVKLENKHFVYRSTSA
DAQHSLTVDLNIEQSPTFTIRNADGSTAYQY

Sequences:

>Translated_431_residues
MVVSTDSSRTMPDWVKYGVFWHVYPLGFCGADIRPAGPRQFHGRGLDAMIPWLEYVRDLGASGLLLGPVFESATHGYDTL
DHMHIDVRLGGDAAFDQLIAACRDMGLQVVLDGVFNHVSRDHPAVRAALDETTGRLNPADNPWHGLVRAHVGDNDEPALD
VFEGHGDLVALDHSADETVDYVVHVMSHWLDRGAAGWRLDAAYAVPSPFWARVLPQVKAAHPYSWIFGEVIHGDYPRIIE
ESTMDSITQYELWKSIQHALETENFFELDWNLKRHNAFLNSFVPQTFIGNHDVTRIASQIGPAKAALALAVLMTVGGVPS
IYYGDEQGYVGVKQERFGGDDDVRPKFPDSPAELSTLGEPTYRLHQALIALRRRNPWLMDARTEAVKLENKHFVYRSTSA
DAQHSLTVDLNIEQSPTFTIRNADGSTAYQY
>Mature_431_residues
MVVSTDSSRTMPDWVKYGVFWHVYPLGFCGADIRPAGPRQFHGRGLDAMIPWLEYVRDLGASGLLLGPVFESATHGYDTL
DHMHIDVRLGGDAAFDQLIAACRDMGLQVVLDGVFNHVSRDHPAVRAALDETTGRLNPADNPWHGLVRAHVGDNDEPALD
VFEGHGDLVALDHSADETVDYVVHVMSHWLDRGAAGWRLDAAYAVPSPFWARVLPQVKAAHPYSWIFGEVIHGDYPRIIE
ESTMDSITQYELWKSIQHALETENFFELDWNLKRHNAFLNSFVPQTFIGNHDVTRIASQIGPAKAALALAVLMTVGGVPS
IYYGDEQGYVGVKQERFGGDDDVRPKFPDSPAELSTLGEPTYRLHQALIALRRRNPWLMDARTEAVKLENKHFVYRSTSA
DAQHSLTVDLNIEQSPTFTIRNADGSTAYQY

Specific function: Converts starch into maltose [H]

COG id: COG0366

COG function: function code G; Glycosidases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family [H]

Homologues:

Organism=Escherichia coli, GI1786604, Length=393, Percent_Identity=28.498727735369, Blast_Score=117, Evalue=1e-27,
Organism=Escherichia coli, GI1790687, Length=125, Percent_Identity=31.2, Blast_Score=66, Evalue=4e-12,
Organism=Drosophila melanogaster, GI221330053, Length=404, Percent_Identity=25.4950495049505, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24586599, Length=221, Percent_Identity=28.0542986425339, Blast_Score=75, Evalue=6e-14,
Organism=Drosophila melanogaster, GI24586589, Length=390, Percent_Identity=24.1025641025641, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI45549022, Length=211, Percent_Identity=24.1706161137441, Blast_Score=69, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24586597, Length=211, Percent_Identity=27.4881516587678, Blast_Score=69, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR004185
- InterPro:   IPR006589
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783
- InterPro:   IPR014756 [H]

Pfam domain/function: PF00128 Alpha-amylase; PF02903 Alpha-amylase_N [H]

EC number: =3.2.1.133 [H]

Molecular weight: Translated: 48100; Mature: 48100

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVSTDSSRTMPDWVKYGVFWHVYPLGFCGADIRPAGPRQFHGRGLDAMIPWLEYVRDLG
CEECCCCCCCCHHHHHHCCEEEEEEHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
ASGLLLGPVFESATHGYDTLDHMHIDVRLGGDAAFDQLIAACRDMGLQVVLDGVFNHVSR
CCCEEEHHHHHHHCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHCC
DHPAVRAALDETTGRLNPADNPWHGLVRAHVGDNDEPALDVFEGHGDLVALDHSADETVD
CCHHHHHHHHHHCCCCCCCCCCHHHEEEEECCCCCCCCCEEEECCCCEEEEECCCHHHHH
YVVHVMSHWLDRGAAGWRLDAAYAVPSPFWARVLPQVKAAHPYSWIFGEVIHGDYPRIIE
HHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHH
ESTMDSITQYELWKSIQHALETENFFELDWNLKRHNAFLNSFVPQTFIGNHDVTRIASQI
HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCHHHCCCCHHHHHHHHC
GPAKAALALAVLMTVGGVPSIYYGDEQGYVGVKQERFGGDDDVRPKFPDSPAELSTLGEP
CHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHCCCH
TYRLHQALIALRRRNPWLMDARTEAVKLENKHFVYRSTSADAQHSLTVDLNIEQSPTFTI
HHHHHHHHHHHHHCCCCEECCCCHHEEECCCEEEEECCCCCCCEEEEEEEEECCCCCEEE
RNADGSTAYQY
ECCCCCCCCCC
>Mature Secondary Structure
MVVSTDSSRTMPDWVKYGVFWHVYPLGFCGADIRPAGPRQFHGRGLDAMIPWLEYVRDLG
CEECCCCCCCCHHHHHHCCEEEEEEHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
ASGLLLGPVFESATHGYDTLDHMHIDVRLGGDAAFDQLIAACRDMGLQVVLDGVFNHVSR
CCCEEEHHHHHHHCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHCC
DHPAVRAALDETTGRLNPADNPWHGLVRAHVGDNDEPALDVFEGHGDLVALDHSADETVD
CCHHHHHHHHHHCCCCCCCCCCHHHEEEEECCCCCCCCCEEEECCCCEEEEECCCHHHHH
YVVHVMSHWLDRGAAGWRLDAAYAVPSPFWARVLPQVKAAHPYSWIFGEVIHGDYPRIIE
HHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHH
ESTMDSITQYELWKSIQHALETENFFELDWNLKRHNAFLNSFVPQTFIGNHDVTRIASQI
HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCHHHCCCCHHHHHHHHC
GPAKAALALAVLMTVGGVPSIYYGDEQGYVGVKQERFGGDDDVRPKFPDSPAELSTLGEP
CHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHCCCH
TYRLHQALIALRRRNPWLMDARTEAVKLENKHFVYRSTSADAQHSLTVDLNIEQSPTFTI
HHHHHHHHHHHHHCCCCEECCCCHHEEECCCEEEEECCCCCCCEEEEEEEEECCCCCEEE
RNADGSTAYQY
ECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA