| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692424
Identifier: 213692424
GI number: 213692424
Start: 1701718
End: 1702788
Strand: Direct
Name: 213692424
Synonym: Blon_1553
Alternate gene names: NA
Gene position: 1701718-1702788 (Clockwise)
Preceding gene: 213692423
Following gene: 213692425
Centisome position: 60.07
GC content: 62.84
Gene sequence:
>1071_bases ATGAGTGGAACCCTGGAAAAGAACATCATCAGCCCGTCCGAGGCGTCGGGCGTGGTGCAGTCCGGCTTCGATTTCATCGA CGGCCTGCTGCCGTTCGGCTCCGTGTTCCCCGTCAAGTCGAATGACGGCAAGGACACGGTGACGTGGCAGAAGATCATCC CGCCGAAGGAGACCGACGCCATGAAGTTCCGCGCCTGGGACGCGGAGGCCGCTCACGGCAAGACCGTCGCCCAGTCCGGC GAGAACTACACGGGCCTTATCCCGCTGTCGAAGATGGGCCACATCTCCGAACGCGACGTCATCAACCACACGGGCGATTC CACGTGGCTGCATGACAAGGCCGTGGAAATCCTCACCCAGTTGGGCCAGGAAGCCGCCGTACGCATCGAACTGGCCCGCA TCGCCGCCATGGTTGACGCGAAGATCACCGTCGAGGAGAACGGCCTGAAGGCCAACACGTGGACGTTCGACCGTCCGAAC AGCATCTCCAAGCTCACTCCCGCCAAAGTCTGGTCGGACGTGAAGTCCGATCCGGTCACCGACGTGCAGAAGTGGGTGGA CGCCATCAAGAAGGAGCGTGGCCGTACTCCGGGTGCCGCGCTGACCACCAGCAAGGTCATCGACGCGCTGCGCACCAACG AGTCGTTCATCACCGAATACACCGGCGTCTCCCTCGCCAACTCGAAGCCGCGCCTGACCCGCGCCGAAGTGCTGGACGTG CTGCGCACCGCCTGCGGCCTCGCCGACGTGCGCATGATCGACGTGCTGTACACCGATCTCGAGGTCAACAACGGCTTCAA GATGCCGGTGGACACGAACACGCTGATCCCCAACGGCACGTTCATCATGTTCCCGTCGTACAACGACACGGGTCTCGGTT TCACCGCCTCCGGCCCGACAGCAGAAGGACAGGATCCCGAATACGGCATCAACAAGAGCGTGAACGACGGTTTCATCGGA GCCATGTTCTCCGGTGGCGCCCCGGTCAAGTACGACCTGTGGGCCAACGGCACGATGATGCCGATCCTGCAGGAGGCCGT CAGCACCGCGAAGGTTTCCGTCCTCGGATAG
Upstream 100 bases:
>100_bases ACCGCACTCAAGACAGCCGGCATCGCCAAGTAACCAATCCAACAACCCTTATAAGCCCGCCCATTGTGGCGGGCTTTCGT ATATCTGAAAGGAACCCTCA
Downstream 100 bases:
>100_bases TAAGGAGGGGTCGTGGCTTCCATCGATTCCATCGACTGGCTGAAATGGTTGCGTGTCAACGCGCTCGACCAGCCCGACCT TCTCCTTGACCGGTTTCCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MSGTLEKNIISPSEASGVVQSGFDFIDGLLPFGSVFPVKSNDGKDTVTWQKIIPPKETDAMKFRAWDAEAAHGKTVAQSG ENYTGLIPLSKMGHISERDVINHTGDSTWLHDKAVEILTQLGQEAAVRIELARIAAMVDAKITVEENGLKANTWTFDRPN SISKLTPAKVWSDVKSDPVTDVQKWVDAIKKERGRTPGAALTTSKVIDALRTNESFITEYTGVSLANSKPRLTRAEVLDV LRTACGLADVRMIDVLYTDLEVNNGFKMPVDTNTLIPNGTFIMFPSYNDTGLGFTASGPTAEGQDPEYGINKSVNDGFIG AMFSGGAPVKYDLWANGTMMPILQEAVSTAKVSVLG
Sequences:
>Translated_356_residues MSGTLEKNIISPSEASGVVQSGFDFIDGLLPFGSVFPVKSNDGKDTVTWQKIIPPKETDAMKFRAWDAEAAHGKTVAQSG ENYTGLIPLSKMGHISERDVINHTGDSTWLHDKAVEILTQLGQEAAVRIELARIAAMVDAKITVEENGLKANTWTFDRPN SISKLTPAKVWSDVKSDPVTDVQKWVDAIKKERGRTPGAALTTSKVIDALRTNESFITEYTGVSLANSKPRLTRAEVLDV LRTACGLADVRMIDVLYTDLEVNNGFKMPVDTNTLIPNGTFIMFPSYNDTGLGFTASGPTAEGQDPEYGINKSVNDGFIG AMFSGGAPVKYDLWANGTMMPILQEAVSTAKVSVLG >Mature_355_residues SGTLEKNIISPSEASGVVQSGFDFIDGLLPFGSVFPVKSNDGKDTVTWQKIIPPKETDAMKFRAWDAEAAHGKTVAQSGE NYTGLIPLSKMGHISERDVINHTGDSTWLHDKAVEILTQLGQEAAVRIELARIAAMVDAKITVEENGLKANTWTFDRPNS ISKLTPAKVWSDVKSDPVTDVQKWVDAIKKERGRTPGAALTTSKVIDALRTNESFITEYTGVSLANSKPRLTRAEVLDVL RTACGLADVRMIDVLYTDLEVNNGFKMPVDTNTLIPNGTFIMFPSYNDTGLGFTASGPTAEGQDPEYGINKSVNDGFIGA MFSGGAPVKYDLWANGTMMPILQEAVSTAKVSVLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38463; Mature: 38332
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGTLEKNIISPSEASGVVQSGFDFIDGLLPFGSVFPVKSNDGKDTVTWQKIIPPKETDA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEECCCCCCCCC MKFRAWDAEAAHGKTVAQSGENYTGLIPLSKMGHISERDVINHTGDSTWLHDKAVEILTQ EEEEECCCCCCCCCHHHHCCCCEEEEEEHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHH LGQEAAVRIELARIAAMVDAKITVEENGLKANTWTFDRPNSISKLTPAKVWSDVKSDPVT HCHHHHHHHHHHHHHHHHCCEEEEECCCCEECCEECCCCCCCCCCCHHHHHHHHCCCCHH DVQKWVDAIKKERGRTPGAALTTSKVIDALRTNESFITEYTGVSLANSKPRLTRAEVLDV HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHCCCCEECCCCCCCHHHHHHHH LRTACGLADVRMIDVLYTDLEVNNGFKMPVDTNTLIPNGTFIMFPSYNDTGLGFTASGPT HHHHHCCCHHHEEEEEEEEEEECCCEECCCCCCEECCCCCEEEECCCCCCCCEEECCCCC AEGQDPEYGINKSVNDGFIGAMFSGGAPVKYDLWANGTMMPILQEAVSTAKVSVLG CCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCEEHHHHHHHHHHHEEEECC >Mature Secondary Structure SGTLEKNIISPSEASGVVQSGFDFIDGLLPFGSVFPVKSNDGKDTVTWQKIIPPKETDA CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEECCCCCCCCC MKFRAWDAEAAHGKTVAQSGENYTGLIPLSKMGHISERDVINHTGDSTWLHDKAVEILTQ EEEEECCCCCCCCCHHHHCCCCEEEEEEHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHH LGQEAAVRIELARIAAMVDAKITVEENGLKANTWTFDRPNSISKLTPAKVWSDVKSDPVT HCHHHHHHHHHHHHHHHHCCEEEEECCCCEECCEECCCCCCCCCCCHHHHHHHHCCCCHH DVQKWVDAIKKERGRTPGAALTTSKVIDALRTNESFITEYTGVSLANSKPRLTRAEVLDV HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHCCCCEECCCCCCCHHHHHHHH LRTACGLADVRMIDVLYTDLEVNNGFKMPVDTNTLIPNGTFIMFPSYNDTGLGFTASGPT HHHHHCCCHHHEEEEEEEEEEECCCEECCCCCCEECCCCCEEEECCCCCCCCEEECCCCC AEGQDPEYGINKSVNDGFIGAMFSGGAPVKYDLWANGTMMPILQEAVSTAKVSVLG CCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCEEHHHHHHHHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA