| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692425
Identifier: 213692425
GI number: 213692425
Start: 1702801
End: 1703232
Strand: Direct
Name: 213692425
Synonym: Blon_1554
Alternate gene names: NA
Gene position: 1702801-1703232 (Clockwise)
Preceding gene: 213692424
Following gene: 213692426
Centisome position: 60.11
GC content: 59.49
Gene sequence:
>432_bases GTGGCTTCCATCGATTCCATCGACTGGCTGAAATGGTTGCGTGTCAACGCGCTCGACCAGCCCGACCTTCTCCTTGACCG GTTTCCCAACGCATGGCTGCTCAATGAGTGCGGGGTCGCTGCCGACATGGTTCAGGCTGAATGCCAGAACGTGGCCCCGC GTTATCAGAACGGCCTGTTGAAGGAGCGCACGCTTGGCTATGTGGTGAGCCAGATGGTGTTGCGTGTCGTCCGCTACCGG CAGTTCAAGACCGAATCGAACGGCAGCTACTCGTATACGAACTTCGATGCGCAGGACAATCCGCCCGGCAAGGACGGTTC CATGAACCTGTACGTGTCGAAACGTGAGAAGGCGCTGCTGGAAGGCCATTCCGACTCGATGGGCCCGATGGGTACCGTGC ATATGGGTCTCGACCGCGCCTACGGCCTGTGA
Upstream 100 bases:
>100_bases GGTCAAGTACGACCTGTGGGCCAACGGCACGATGATGCCGATCCTGCAGGAGGCCGTCAGCACCGCGAAGGTTTCCGTCC TCGGATAGTAAGGAGGGGTC
Downstream 100 bases:
>100_bases GGCGCTTATGGAGACCTATGACATGGGCCACCTCTACGACGGGGTGGACATCGACGAGCTGGGCGGAGGTCACCTGTACG ACCGTACGGAATTGACCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MASIDSIDWLKWLRVNALDQPDLLLDRFPNAWLLNECGVAADMVQAECQNVAPRYQNGLLKERTLGYVVSQMVLRVVRYR QFKTESNGSYSYTNFDAQDNPPGKDGSMNLYVSKREKALLEGHSDSMGPMGTVHMGLDRAYGL
Sequences:
>Translated_143_residues MASIDSIDWLKWLRVNALDQPDLLLDRFPNAWLLNECGVAADMVQAECQNVAPRYQNGLLKERTLGYVVSQMVLRVVRYR QFKTESNGSYSYTNFDAQDNPPGKDGSMNLYVSKREKALLEGHSDSMGPMGTVHMGLDRAYGL >Mature_142_residues ASIDSIDWLKWLRVNALDQPDLLLDRFPNAWLLNECGVAADMVQAECQNVAPRYQNGLLKERTLGYVVSQMVLRVVRYRQ FKTESNGSYSYTNFDAQDNPPGKDGSMNLYVSKREKALLEGHSDSMGPMGTVHMGLDRAYGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16136; Mature: 16004
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASIDSIDWLKWLRVNALDQPDLLLDRFPNAWLLNECGVAADMVQAECQNVAPRYQNGLL CCCCCHHHHHHHHHHCCCCCCHHHHHHCCCCEEHHHCCHHHHHHHHHHHHCCCHHHCCCH KERTLGYVVSQMVLRVVRYRQFKTESNGSYSYTNFDAQDNPPGKDGSMNLYVSKREKALL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCEEEEEECHHHHHH EGHSDSMGPMGTVHMGLDRAYGL CCCCCCCCCCCEEHHCCHHHCCC >Mature Secondary Structure ASIDSIDWLKWLRVNALDQPDLLLDRFPNAWLLNECGVAADMVQAECQNVAPRYQNGLL CCCCHHHHHHHHHHCCCCCCHHHHHHCCCCEEHHHCCHHHHHHHHHHHHCCCHHHCCCH KERTLGYVVSQMVLRVVRYRQFKTESNGSYSYTNFDAQDNPPGKDGSMNLYVSKREKALL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCEEEEEECHHHHHH EGHSDSMGPMGTVHMGLDRAYGL CCCCCCCCCCCEEHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA