| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
Click here to switch to the map view.
The map label for this gene is 213692407
Identifier: 213692407
GI number: 213692407
Start: 1686632
End: 1687177
Strand: Reverse
Name: 213692407
Synonym: Blon_1536
Alternate gene names: NA
Gene position: 1687177-1686632 (Counterclockwise)
Preceding gene: 213692408
Following gene: 213692406
Centisome position: 59.56
GC content: 56.41
Gene sequence:
>546_bases ATGGAAGACAAGTTGGAGAATTTGCAGGCGTTGATTGAGGGCTCGGGGCTAGGGGATGTATGCCAAAAGGTGCGGGGCAT GTCCGAGGCGCGGGTCCTGTGGGTATTGGATGGATATAAGGTTGATGGGTTGCCGTCCGGCCGTGAGTTTTTCATCGAAT GGGATTCGCTGGAGCACGTACAAAACCAGTTGAGGGAGCTTGCGGACGGCGGCTATGACGCCGACGATGACGTGGCCCAG ATGATGAATGACCTTGTGCCTGTCGATACGGCGTACAGTCGTATGCGCAAGGTCCGCGCCAGCTTGAAGTTTTTCGCCGC GATGGCGGAAGACGACGGTATGGAGACCTACCGTATCTCCCAGCATGTCACGACAATCGAATACCGGCAGGTCAAGGCTC CCAAGGGATTGACCTTCGCTGAACTGTGCGATTGGGTGGAGGAGAACGGTGACGGCGATCTATACGACGTTGACGATATC GGCAGTGACGTGTTCGCCGCCAGTCGCCAGGATGGTACGGAACTTGATTCCAGGGAGTCGGAATGA
Upstream 100 bases:
>100_bases ATGGTGCGGTTTTCACATAAATCAGCATTTAGACGGGACTTTAGAGCGTTCTATTGTTCCGTCAATCGTTTTACCGAACA ATACAAAGGAAGGTTTTGTC
Downstream 100 bases:
>100_bases TTACCGCTGTCTACCGTTATGAGCGTTTCGACCCGGCCACGAACACGGAACTGTGGCGGCGCATACCCGGCTGGAGGTTG CGTCTCATGTGGCTTCAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MEDKLENLQALIEGSGLGDVCQKVRGMSEARVLWVLDGYKVDGLPSGREFFIEWDSLEHVQNQLRELADGGYDADDDVAQ MMNDLVPVDTAYSRMRKVRASLKFFAAMAEDDGMETYRISQHVTTIEYRQVKAPKGLTFAELCDWVEENGDGDLYDVDDI GSDVFAASRQDGTELDSRESE
Sequences:
>Translated_181_residues MEDKLENLQALIEGSGLGDVCQKVRGMSEARVLWVLDGYKVDGLPSGREFFIEWDSLEHVQNQLRELADGGYDADDDVAQ MMNDLVPVDTAYSRMRKVRASLKFFAAMAEDDGMETYRISQHVTTIEYRQVKAPKGLTFAELCDWVEENGDGDLYDVDDI GSDVFAASRQDGTELDSRESE >Mature_181_residues MEDKLENLQALIEGSGLGDVCQKVRGMSEARVLWVLDGYKVDGLPSGREFFIEWDSLEHVQNQLRELADGGYDADDDVAQ MMNDLVPVDTAYSRMRKVRASLKFFAAMAEDDGMETYRISQHVTTIEYRQVKAPKGLTFAELCDWVEENGDGDLYDVDDI GSDVFAASRQDGTELDSRESE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20347; Mature: 20347
Theoretical pI: Translated: 4.00; Mature: 4.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDKLENLQALIEGSGLGDVCQKVRGMSEARVLWVLDGYKVDGLPSGREFFIEWDSLEHV CCHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEECCEEECCCCCCCEEEEECHHHHHH QNQLRELADGGYDADDDVAQMMNDLVPVDTAYSRMRKVRASLKFFAAMAEDDGMETYRIS HHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHH QHVTTIEYRQVKAPKGLTFAELCDWVEENGDGDLYDVDDIGSDVFAASRQDGTELDSRES HHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEHHHCCCHHHHCCCCCCCCCCCCCC E C >Mature Secondary Structure MEDKLENLQALIEGSGLGDVCQKVRGMSEARVLWVLDGYKVDGLPSGREFFIEWDSLEHV CCHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEECCEEECCCCCCCEEEEECHHHHHH QNQLRELADGGYDADDDVAQMMNDLVPVDTAYSRMRKVRASLKFFAAMAEDDGMETYRIS HHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHH QHVTTIEYRQVKAPKGLTFAELCDWVEENGDGDLYDVDDIGSDVFAASRQDGTELDSRES HHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEHHHCCCHHHHCCCCCCCCCCCCCC E C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA