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The map label for this gene is yifB [C]

Identifier: 213692406

GI number: 213692406

Start: 1685656

End: 1686411

Strand: Reverse

Name: yifB [C]

Synonym: Blon_1535

Alternate gene names: 213692406

Gene position: 1686411-1685656 (Counterclockwise)

Preceding gene: 213692407

Following gene: 213692405

Centisome position: 59.53

GC content: 51.72

Gene sequence:

>756_bases
ATGAGCATCGTATGCAAGACAATTAACACGACCGGCAAGCACCTGTATGGCGTCACGGTGGAAGCGTTTCTACGAAAGGG
ACTACCATATTTCAGTCTTATCGGATTACCGGACGCAAGCCTATCCGATACGCGAGAGCGTATCAAGGTCGGAATGCAAG
CAAGCGGTATCACATGGCCCGACTGTCGCATCAACGTGAATCTTGCGCCGGCGTCAATGGGCAAGGCTGACGGAATTTGT
GACCTTGCCATAGCGTTGGTGGTTCGAGGGCTGGCTGAATACAATAATAATCCAGATTATGATCTCCACGTCTACCTGGC
TGGGCTTAGGGGGCTTGTGGCTATCGGCAAAATCAATGCCGATGGTGACGTGCATTCCACTCCCATTAGCGCCAAGGACG
TAGTGGCCTACGCGGTTAAGCATGGCGCGAAGCGTGTCTTGGTGCCATACTCGAGCTTTCTGGACTATCTCAGCGTTGAG
GATAGCGAGGCGACTGAGATTGATTCTTGCGTTATAAAAGGCGTTGAAATTCTTGGCATTAAAAATCTGACCGAGGCTTT
CTCAGTCGTTGACGGTTTCGGGAACGCCGGCAACTCGGATATCGGCGGTCTGAACACCAAGCGTATGGAAGCTGCCTTGC
ATGAGGTGTGGAAATGGTATGACGAAGCGGGGGAGGACGGGGAAAGCTATGTGCTTGACCCGGATAATCTCAGCAAGTTC
GCCGCCGATCTATGCAAGGAATACTCAAAATCTTGA

Upstream 100 bases:

>100_bases
CGGCTCGAATCTCATATCGGGCTTGGCTGTACGCGAATGCTTCGGGCGGCGGTCAATGGTTGGCCGCTGACATGTTGGAC
TGGAATCAGGAGGTAATCAA

Downstream 100 bases:

>100_bases
TACACTGAAGGCCATAGGACTATCTTGTGACCTTCTGGGAATTAGCAAACCAAAACACAAGGGGCACGGCGACTGTCGTG
CCCGAACATTTTTCAGGAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 250

Protein sequence:

>251_residues
MSIVCKTINTTGKHLYGVTVEAFLRKGLPYFSLIGLPDASLSDTRERIKVGMQASGITWPDCRINVNLAPASMGKADGIC
DLAIALVVRGLAEYNNNPDYDLHVYLAGLRGLVAIGKINADGDVHSTPISAKDVVAYAVKHGAKRVLVPYSSFLDYLSVE
DSEATEIDSCVIKGVEILGIKNLTEAFSVVDGFGNAGNSDIGGLNTKRMEAALHEVWKWYDEAGEDGESYVLDPDNLSKF
AADLCKEYSKS

Sequences:

>Translated_251_residues
MSIVCKTINTTGKHLYGVTVEAFLRKGLPYFSLIGLPDASLSDTRERIKVGMQASGITWPDCRINVNLAPASMGKADGIC
DLAIALVVRGLAEYNNNPDYDLHVYLAGLRGLVAIGKINADGDVHSTPISAKDVVAYAVKHGAKRVLVPYSSFLDYLSVE
DSEATEIDSCVIKGVEILGIKNLTEAFSVVDGFGNAGNSDIGGLNTKRMEAALHEVWKWYDEAGEDGESYVLDPDNLSKF
AADLCKEYSKS
>Mature_250_residues
SIVCKTINTTGKHLYGVTVEAFLRKGLPYFSLIGLPDASLSDTRERIKVGMQASGITWPDCRINVNLAPASMGKADGICD
LAIALVVRGLAEYNNNPDYDLHVYLAGLRGLVAIGKINADGDVHSTPISAKDVVAYAVKHGAKRVLVPYSSFLDYLSVED
SEATEIDSCVIKGVEILGIKNLTEAFSVVDGFGNAGNSDIGGLNTKRMEAALHEVWKWYDEAGEDGESYVLDPDNLSKFA
ADLCKEYSKS

Specific function: Unknown

COG id: COG0606

COG function: function code O; Predicted ATPase with chaperone activity

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Mg-chelatase subunits D/I family. ComM subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693202, Length=101, Percent_Identity=35.6435643564356, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR004482
- InterPro:   IPR000523
- InterPro:   IPR008269
- InterPro:   IPR020568 [H]

Pfam domain/function: PF05362 Lon_C; PF01078 Mg_chelatase [H]

EC number: NA

Molecular weight: Translated: 27056; Mature: 26925

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIVCKTINTTGKHLYGVTVEAFLRKGLPYFSLIGLPDASLSDTRERIKVGMQASGITWP
CCEEEEECCCCCCEEEHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCC
DCRINVNLAPASMGKADGICDLAIALVVRGLAEYNNNPDYDLHVYLAGLRGLVAIGKINA
CCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHEEEEEECC
DGDVHSTPISAKDVVAYAVKHGAKRVLVPYSSFLDYLSVEDSEATEIDSCVIKGVEILGI
CCCCCCCCCCHHHHHHHHHHHCCCEEEECHHHHHHHHCCCCCCHHHHHHHHHHCHHHCCH
KNLTEAFSVVDGFGNAGNSDIGGLNTKRMEAALHEVWKWYDEAGEDGESYVLDPDNLSKF
HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHH
AADLCKEYSKS
HHHHHHHHCCC
>Mature Secondary Structure 
SIVCKTINTTGKHLYGVTVEAFLRKGLPYFSLIGLPDASLSDTRERIKVGMQASGITWP
CEEEEECCCCCCEEEHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCC
DCRINVNLAPASMGKADGICDLAIALVVRGLAEYNNNPDYDLHVYLAGLRGLVAIGKINA
CCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHEEEEEECC
DGDVHSTPISAKDVVAYAVKHGAKRVLVPYSSFLDYLSVEDSEATEIDSCVIKGVEILGI
CCCCCCCCCCHHHHHHHHHHHCCCEEEECHHHHHHHHCCCCCCHHHHHHHHHHCHHHCCH
KNLTEAFSVVDGFGNAGNSDIGGLNTKRMEAALHEVWKWYDEAGEDGESYVLDPDNLSKF
HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHH
AADLCKEYSKS
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]