| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692405
Identifier: 213692405
GI number: 213692405
Start: 1685178
End: 1685549
Strand: Reverse
Name: 213692405
Synonym: Blon_1534
Alternate gene names: NA
Gene position: 1685549-1685178 (Counterclockwise)
Preceding gene: 213692406
Following gene: 213692404
Centisome position: 59.5
GC content: 57.53
Gene sequence:
>372_bases ATGCCTACTCACGTTTCTCAGAGCGTCAGGGAACTCAAGGAGCTGGGTCGAAACCTGTACGCGGCCATGAGGTCAGATTT CGAGGTTAACTCTAACGCTTCGGCGCTTCCGCTCGACTATTTCGAGCGTATCGTCACGTGGTATCAGGCTCATAAAGGCG ACGCAACCATGATGGACGATGTGATGGAGGCTTGCGGCCGCGCCGGATTGTCCGCAAGCGACGCTGACGAACTCCGAGAT TACGCGGACACGCTGTTCCAGGACGGGAAGCTCAAGGTCGAACGCTTGTGGGAGCTGACTTCTGAGTCAATGGACGAGTG GGGCGATTCCACGCCCGTGCCGAGCCGGTACACCGACGCTAAAAAGTGCTAG
Upstream 100 bases:
>100_bases GAAGGCCATAGGACTATCTTGTGACCTTCTGGGAATTAGCAAACCAAAACACAAGGGGCACGGCGACTGTCGTGCCCGAA CATTTTTCAGGAGGAATATC
Downstream 100 bases:
>100_bases ACTTGACCATTACCGGCGTTCAATGCCGTGTTGTCACCCGGTTTCCGGGCGTGGATTGAAACATTCTTACCATCAGTGCG TCCCGAGCATATCGTTCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 123; Mature: 122
Protein sequence:
>123_residues MPTHVSQSVRELKELGRNLYAAMRSDFEVNSNASALPLDYFERIVTWYQAHKGDATMMDDVMEACGRAGLSASDADELRD YADTLFQDGKLKVERLWELTSESMDEWGDSTPVPSRYTDAKKC
Sequences:
>Translated_123_residues MPTHVSQSVRELKELGRNLYAAMRSDFEVNSNASALPLDYFERIVTWYQAHKGDATMMDDVMEACGRAGLSASDADELRD YADTLFQDGKLKVERLWELTSESMDEWGDSTPVPSRYTDAKKC >Mature_122_residues PTHVSQSVRELKELGRNLYAAMRSDFEVNSNASALPLDYFERIVTWYQAHKGDATMMDDVMEACGRAGLSASDADELRDY ADTLFQDGKLKVERLWELTSESMDEWGDSTPVPSRYTDAKKC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13936; Mature: 13804
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTHVSQSVRELKELGRNLYAAMRSDFEVNSNASALPLDYFERIVTWYQAHKGDATMMDD CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHH VMEACGRAGLSASDADELRDYADTLFQDGKLKVERLWELTSESMDEWGDSTPVPSRYTDA HHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC KKC CCC >Mature Secondary Structure PTHVSQSVRELKELGRNLYAAMRSDFEVNSNASALPLDYFERIVTWYQAHKGDATMMDD CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHH VMEACGRAGLSASDADELRDYADTLFQDGKLKVERLWELTSESMDEWGDSTPVPSRYTDA HHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC KKC CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA