| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692400
Identifier: 213692400
GI number: 213692400
Start: 1682220
End: 1682999
Strand: Direct
Name: 213692400
Synonym: Blon_1528
Alternate gene names: NA
Gene position: 1682220-1682999 (Clockwise)
Preceding gene: 213692399
Following gene: 213692401
Centisome position: 59.38
GC content: 54.62
Gene sequence:
>780_bases ATGAGCACTGAAATACAACGATTCGACTTCAAAGGCGCTGCACTGCGTACCTTGACCGATGAGGCGGGGGAGCCTTGGTT CGTCGCCAAGGACGTATGCGACATCCTCGGCATCGATACCAATCATCTCGGAGAAAGCCTTGATTCCGACGAGATGAATA CCCTCCGAATTACGGAGGGAAATACCAGAGGCAATCCGAATAAGACCATCATTAGTGAGCCTGGCCTGTATCGTCTGGTC ATGCGTTCGCGGAAGCCGGAGGCGAAGGAGTTCCAACGCTGGGTGACGCATGAGGTGCTGCCATCGATTCGCAGGCATGG TGCGTACATGACCGAATCGACTTTGGAAAAGGCAGTCACCGAACCCGACTTCCTTATCCGGCTTGCCACGCAAATCAAAC AGGAGCGGGCGGAAAAGGAGAAGGCCCAAGCACAGGTCGAACGGATGCGTCCCAAAGCGTTGTTCGCTGACGCTGTGGAA ACCTCGAAGACCAGCATCCTTGTGGGCGACTTGGCGAAAGTCCTGAAAGGCAATGGCGTGGATATTGGCGGCACTCGCTT GTTCGCGTGGCTGAGGGACAACGGATGGCTGATGAAAACCGGCAGCTCTCGCAACATGCCCACGCAGAAATCTATGGAAT TGGGCTTGTTCGAGATCAAGGAAACCACCGTGGTTCACTCGGACGGTCACACGACCATCAACAAGACGCCGAAAGTCACG GGCAAAGGTCAGACGTTCTTCGTCAACAAGTTCCTCGGACACAGGGAGATTACTCAATGA
Upstream 100 bases:
>100_bases AGGCGTTGGGGAATTCAATGGCCGTTCCGGTCATGAGATGGATAGGCGAAGGAATTCAACTCGTCGAAGACAACAAGGAA CTTTTCAAGAAGGACAACCA
Downstream 100 bases:
>100_bases GCATCAATCTTGGTACCACGGAAGTGGAATTGAGCTTGTACTCCAAGGCGCTTCAACTAGCCACGTTCACCGTGGAAGTC CCGGTGGTGGGCGAACTGGA
Product: phage antirepressor protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MSTEIQRFDFKGAALRTLTDEAGEPWFVAKDVCDILGIDTNHLGESLDSDEMNTLRITEGNTRGNPNKTIISEPGLYRLV MRSRKPEAKEFQRWVTHEVLPSIRRHGAYMTESTLEKAVTEPDFLIRLATQIKQERAEKEKAQAQVERMRPKALFADAVE TSKTSILVGDLAKVLKGNGVDIGGTRLFAWLRDNGWLMKTGSSRNMPTQKSMELGLFEIKETTVVHSDGHTTINKTPKVT GKGQTFFVNKFLGHREITQ
Sequences:
>Translated_259_residues MSTEIQRFDFKGAALRTLTDEAGEPWFVAKDVCDILGIDTNHLGESLDSDEMNTLRITEGNTRGNPNKTIISEPGLYRLV MRSRKPEAKEFQRWVTHEVLPSIRRHGAYMTESTLEKAVTEPDFLIRLATQIKQERAEKEKAQAQVERMRPKALFADAVE TSKTSILVGDLAKVLKGNGVDIGGTRLFAWLRDNGWLMKTGSSRNMPTQKSMELGLFEIKETTVVHSDGHTTINKTPKVT GKGQTFFVNKFLGHREITQ >Mature_258_residues STEIQRFDFKGAALRTLTDEAGEPWFVAKDVCDILGIDTNHLGESLDSDEMNTLRITEGNTRGNPNKTIISEPGLYRLVM RSRKPEAKEFQRWVTHEVLPSIRRHGAYMTESTLEKAVTEPDFLIRLATQIKQERAEKEKAQAQVERMRPKALFADAVET SKTSILVGDLAKVLKGNGVDIGGTRLFAWLRDNGWLMKTGSSRNMPTQKSMELGLFEIKETTVVHSDGHTTINKTPKVTG KGQTFFVNKFLGHREITQ
Specific function: Unknown
COG id: COG3645
COG function: function code S; Uncharacterized phage-encoded protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Bro-N domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003497 - InterPro: IPR018876 [H]
Pfam domain/function: PF02498 Bro-N; PF10548 P22_AR_C [H]
EC number: NA
Molecular weight: Translated: 29164; Mature: 29032
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTEIQRFDFKGAALRTLTDEAGEPWFVAKDVCDILGIDTNHLGESLDSDEMNTLRITEG CCCCCCCCCCCCHHHHHHHHCCCCCEEEHHHHHHHHCCCHHHHCCCCCCCCCCEEEEECC NTRGNPNKTIISEPGLYRLVMRSRKPEAKEFQRWVTHEVLPSIRRHGAYMTESTLEKAVT CCCCCCCCEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHC EPDFLIRLATQIKQERAEKEKAQAQVERMRPKALFADAVETSKTSILVGDLAKVLKGNGV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEHHHHHHHHHCCCCC DIGGTRLFAWLRDNGWLMKTGSSRNMPTQKSMELGLFEIKETTVVHSDGHTTINKTPKVT CCCCCEEEEEEECCCEEEECCCCCCCCCHHHHHCCEEEEEEEEEEECCCCEECCCCCCCC GKGQTFFVNKFLGHREITQ CCCCEEEEEHHHCCCCCCC >Mature Secondary Structure STEIQRFDFKGAALRTLTDEAGEPWFVAKDVCDILGIDTNHLGESLDSDEMNTLRITEG CCCCCCCCCCCHHHHHHHHCCCCCEEEHHHHHHHHCCCHHHHCCCCCCCCCCEEEEECC NTRGNPNKTIISEPGLYRLVMRSRKPEAKEFQRWVTHEVLPSIRRHGAYMTESTLEKAVT CCCCCCCCEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHC EPDFLIRLATQIKQERAEKEKAQAQVERMRPKALFADAVETSKTSILVGDLAKVLKGNGV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEHHHHHHHHHCCCCC DIGGTRLFAWLRDNGWLMKTGSSRNMPTQKSMELGLFEIKETTVVHSDGHTTINKTPKVT CCCCCEEEEEEECCCEEEECCCCCCCCCHHHHHCCEEEEEEEEEEECCCCEECCCCCCCC GKGQTFFVNKFLGHREITQ CCCCEEEEEHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]