| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is aquIMA [H]
Identifier: 213692399
GI number: 213692399
Start: 1680554
End: 1681759
Strand: Direct
Name: aquIMA [H]
Synonym: Blon_1526
Alternate gene names: 213692399
Gene position: 1680554-1681759 (Clockwise)
Preceding gene: 213692398
Following gene: 213692400
Centisome position: 59.33
GC content: 59.04
Gene sequence:
>1206_bases ATGAGCACGATACGCTACATCAGCCTGTTCAGCGGGATCGAAGCCGCCACCGTCGCATGGCGCCAGCTCGGGTGGAAGCC AATCGCATACGCGGAAATCGAGCCATTTCCCAAAGCCGTGCTCAGACAACACTATCCGGAAGTACCAGATTTAGGAGATA TGACCAAAGTTGACTGGAAACAATACCACCATGCGGCAGATGTCGTTGTGGGAGGAAGCCCCTGCCAAGCCTTCTCGATC GCCGGCCTCAGGAAGGCTTTGGACGATCCACGCGGCCAGCTCATGCTCGAATATCTCCGAGCTTGCGCAGAGATTGATCC GGAATGGATCGTCTGGGAGAACGTGCCCGGAGTACTGTCGGCTGAACACGGACGGGCTTTCCAATCGCTCCTTGAAGCCG TGGCCGAACTCTGGCCTGATGGCGGGGCGGCATGGCGAGTGCTGGACGCTCAGTTCTTCGGTGTGGCCCAACGACGCGAG CGTGTGTTCCTTGTCATCAACACTCGAGACTGGCGACGTGCCGCCCCGGTTCTTTTTGAGCGCGAAAGCCTGTGCTGGGA TTCTGCGTCGAGCCGAGAGAAGAGGGAAACCCTTACCGGTGGAACTGCGAACGTCATTGGAAACGCAGATTCACACGTTG GAGAATGCCTGACACCCGGTGAGAGCCAGGCACGCCGCGTGTATGCGGCTGACGGCGTGATGCCGACGTTGAACGCGCGT GAGCATGGCGGGCAGAACCAGCATGCGGTCATGCTGGACTTCCACCAGCAGGACGGCAGGTTCCAGGCGTCGAACCATCC AGACGTGTCGAACACGCTCACCAGCCACATGGGAACCGGTGGGAACAACGTTCCACTTGTGAAAGCGTTCAAATGGAATC AAGGGGAACGCTCGCGCAGTCTGGCGATCGGTGATGTGAGTCCGACATTGAGCACCGACCATAATCCAGCCGTCTACGAG ATAGCGGGAAACATCATCGGTCGCGGCCCAATGAACGGCGGATACCAGCTTGGTGTTGCCGACCCGGACGAAAACGGCGC TTTCACATTGACTTCCACCGATAGACATGCGGTGGCTGGAATCGAGAGAGAGAGAGAAGTGATGTGCCGGGCGGACAGCC AGGCGAACGCCGCATTGGACTCCGACCTCGCGCCGACCTTGATGGCGCACTCCGCGAAGGACGCGCCGATCATATACCCA TCATGA
Upstream 100 bases:
>100_bases CCCATCCACTCGTCAGGACGGGGCACACAACTTCAACAAGCAAAGGGAAACCAATGAGCGACAACCTCAACCACATCAAC GCGCGCATCGGAGGTGAGGC
Downstream 100 bases:
>100_bases CAAGCAACGGAGATGACGTGTTCCCCGCGCTGTGCGCCACTGACGGAAGCAAACGGTTCATCGACAACCAGTCCATCAAC GGTGGGCGACTACTGATCGA
Product: DNA-cytosine methyltransferase
Products: NA
Alternate protein names: M.AquI subunit alpha; M.AquiA; Cytosine-specific methyltransferase AquI subunit alpha [H]
Number of amino acids: Translated: 401; Mature: 400
Protein sequence:
>401_residues MSTIRYISLFSGIEAATVAWRQLGWKPIAYAEIEPFPKAVLRQHYPEVPDLGDMTKVDWKQYHHAADVVVGGSPCQAFSI AGLRKALDDPRGQLMLEYLRACAEIDPEWIVWENVPGVLSAEHGRAFQSLLEAVAELWPDGGAAWRVLDAQFFGVAQRRE RVFLVINTRDWRRAAPVLFERESLCWDSASSREKRETLTGGTANVIGNADSHVGECLTPGESQARRVYAADGVMPTLNAR EHGGQNQHAVMLDFHQQDGRFQASNHPDVSNTLTSHMGTGGNNVPLVKAFKWNQGERSRSLAIGDVSPTLSTDHNPAVYE IAGNIIGRGPMNGGYQLGVADPDENGAFTLTSTDRHAVAGIEREREVMCRADSQANAALDSDLAPTLMAHSAKDAPIIYP S
Sequences:
>Translated_401_residues MSTIRYISLFSGIEAATVAWRQLGWKPIAYAEIEPFPKAVLRQHYPEVPDLGDMTKVDWKQYHHAADVVVGGSPCQAFSI AGLRKALDDPRGQLMLEYLRACAEIDPEWIVWENVPGVLSAEHGRAFQSLLEAVAELWPDGGAAWRVLDAQFFGVAQRRE RVFLVINTRDWRRAAPVLFERESLCWDSASSREKRETLTGGTANVIGNADSHVGECLTPGESQARRVYAADGVMPTLNAR EHGGQNQHAVMLDFHQQDGRFQASNHPDVSNTLTSHMGTGGNNVPLVKAFKWNQGERSRSLAIGDVSPTLSTDHNPAVYE IAGNIIGRGPMNGGYQLGVADPDENGAFTLTSTDRHAVAGIEREREVMCRADSQANAALDSDLAPTLMAHSAKDAPIIYP S >Mature_400_residues STIRYISLFSGIEAATVAWRQLGWKPIAYAEIEPFPKAVLRQHYPEVPDLGDMTKVDWKQYHHAADVVVGGSPCQAFSIA GLRKALDDPRGQLMLEYLRACAEIDPEWIVWENVPGVLSAEHGRAFQSLLEAVAELWPDGGAAWRVLDAQFFGVAQRRER VFLVINTRDWRRAAPVLFERESLCWDSASSREKRETLTGGTANVIGNADSHVGECLTPGESQARRVYAADGVMPTLNARE HGGQNQHAVMLDFHQQDGRFQASNHPDVSNTLTSHMGTGGNNVPLVKAFKWNQGERSRSLAIGDVSPTLSTDHNPAVYEI AGNIIGRGPMNGGYQLGVADPDENGAFTLTSTDRHAVAGIEREREVMCRADSQANAALDSDLAPTLMAHSAKDAPIIYPS
Specific function: This methylase recognizes the double-stranded sequence CYCGRG, causes specific methylation on C-1 on both strands, and protects the DNA from cleavage by the AquI endonuclease [H]
COG id: COG0270
COG function: function code L; Site-specific DNA methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the C5-methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018117 - InterPro: IPR001525 [H]
Pfam domain/function: PF00145 DNA_methylase [H]
EC number: =2.1.1.37 [H]
Molecular weight: Translated: 43909; Mature: 43777
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: PS00094 C5_MTASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTIRYISLFSGIEAATVAWRQLGWKPIAYAEIEPFPKAVLRQHYPEVPDLGDMTKVDWK CCCEEEEHHHCCCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHCCCCCCCCCCCHHHHH QYHHAADVVVGGSPCQAFSIAGLRKALDDPRGQLMLEYLRACAEIDPEWIVWENVPGVLS HHHHHHCEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCEE AEHGRAFQSLLEAVAELWPDGGAAWRVLDAQFFGVAQRRERVFLVINTRDWRRAAPVLFE CCCCHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHCCCCEEEEEEECCCHHHHCCEEEC RESLCWDSASSREKRETLTGGTANVIGNADSHVGECLTPGESQARRVYAADGVMPTLNAR CHHHCCCCCCCHHHHHHHCCCCCEECCCCCCHHHHCCCCCCHHHCEEEECCCCCCCCCCH EHGGQNQHAVMLDFHQQDGRFQASNHPDVSNTLTSHMGTGGNNVPLVKAFKWNQGERSRS HCCCCCCEEEEEEEECCCCEEECCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCE LAIGDVSPTLSTDHNPAVYEIAGNIIGRGPMNGGYQLGVADPDENGAFTLTSTDRHAVAG EEEECCCCCCCCCCCCEEEEEECCCEECCCCCCCEEEECCCCCCCCEEEEECCCCHHHHC IEREREVMCRADSQANAALDSDLAPTLMAHSAKDAPIIYPS CCHHHHHHHCCCCCCCHHHCCCCCHHHHHCCCCCCCEECCC >Mature Secondary Structure STIRYISLFSGIEAATVAWRQLGWKPIAYAEIEPFPKAVLRQHYPEVPDLGDMTKVDWK CCEEEEHHHCCCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHCCCCCCCCCCCHHHHH QYHHAADVVVGGSPCQAFSIAGLRKALDDPRGQLMLEYLRACAEIDPEWIVWENVPGVLS HHHHHHCEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCEE AEHGRAFQSLLEAVAELWPDGGAAWRVLDAQFFGVAQRRERVFLVINTRDWRRAAPVLFE CCCCHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHCCCCEEEEEEECCCHHHHCCEEEC RESLCWDSASSREKRETLTGGTANVIGNADSHVGECLTPGESQARRVYAADGVMPTLNAR CHHHCCCCCCCHHHHHHHCCCCCEECCCCCCHHHHCCCCCCHHHCEEEECCCCCCCCCCH EHGGQNQHAVMLDFHQQDGRFQASNHPDVSNTLTSHMGTGGNNVPLVKAFKWNQGERSRS HCCCCCCEEEEEEEECCCCEEECCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCE LAIGDVSPTLSTDHNPAVYEIAGNIIGRGPMNGGYQLGVADPDENGAFTLTSTDRHAVAG EEEECCCCCCCCCCCCEEEEEECCCEECCCCCCCEEEECCCCCCCCEEEEECCCCHHHHC IEREREVMCRADSQANAALDSDLAPTLMAHSAKDAPIIYPS CCHHHHHHHCCCCCCCHHHCCCCCHHHHHCCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2104605 [H]