| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
Click here to switch to the map view.
The map label for this gene is 213692381
Identifier: 213692381
GI number: 213692381
Start: 1672404
End: 1672937
Strand: Direct
Name: 213692381
Synonym: Blon_1508
Alternate gene names: NA
Gene position: 1672404-1672937 (Clockwise)
Preceding gene: 213692380
Following gene: 213692382
Centisome position: 59.04
GC content: 60.49
Gene sequence:
>534_bases ATGCGTGACACGATTCTGTGCCTATGCGACCTGACCGGTGTCATGGCCCGCCCTTGGGTGGAACACGGGTATCAAGCCGT GTTGGTGGACCCGCAGCATGGTTGCGACCATGAAGACGGTGCCTACCTGAAACTGGCTTGCACCATCGAGGAAGCGTTCG ACCAGATCAGCGTACTGGTCCGTTCCGGCCGGCTCGCGTTCGTGGCCGGGTTCCCGCCATGTACGGATATGGCGGTGAGT GGAGCGCAATGGTTCGCCCGTAAGTACGAGGCCGACCACATGTTTCAGGCGAAGGCCGTGAGCGTTGCCGAACAATGCCG GGTGATCGGTGAAATGAGCGGCGTCCCGTACATGGTTGAGAACCCGGTGAGCGTACTCAGCCGTGTTTTTGGTAAACCCT CCCACACGTTCGACCCGTGCGACTACACGGCCTACGAGCCCTTGGACAATTACACGAAAAAAACGTGCCTTTGGACGGGG GGGGGGATTCCAGATGCCGCCTCGCAGCCAGGACATGAGCCTGCCGGCTCCTGA
Upstream 100 bases:
>100_bases CCCGTGTGGAATCACACGATCCCGCCTGCATGGCTATACCCCGTGTTGAATCGGCTCTGCGAAAGAGATCTGCAACGAAT GGCGAAGAAATCGAGGAATG
Downstream 100 bases:
>100_bases CCGGAATCGTATCTGGTACATGAGCGGCAAGGACAGAGCCAACAACCGAAGCAAGACGCCGCTCGGCTTCGCCCGCGCGG TTTACGAAGTCAACCAAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MRDTILCLCDLTGVMARPWVEHGYQAVLVDPQHGCDHEDGAYLKLACTIEEAFDQISVLVRSGRLAFVAGFPPCTDMAVS GAQWFARKYEADHMFQAKAVSVAEQCRVIGEMSGVPYMVENPVSVLSRVFGKPSHTFDPCDYTAYEPLDNYTKKTCLWTG GGIPDAASQPGHEPAGS
Sequences:
>Translated_177_residues MRDTILCLCDLTGVMARPWVEHGYQAVLVDPQHGCDHEDGAYLKLACTIEEAFDQISVLVRSGRLAFVAGFPPCTDMAVS GAQWFARKYEADHMFQAKAVSVAEQCRVIGEMSGVPYMVENPVSVLSRVFGKPSHTFDPCDYTAYEPLDNYTKKTCLWTG GGIPDAASQPGHEPAGS >Mature_177_residues MRDTILCLCDLTGVMARPWVEHGYQAVLVDPQHGCDHEDGAYLKLACTIEEAFDQISVLVRSGRLAFVAGFPPCTDMAVS GAQWFARKYEADHMFQAKAVSVAEQCRVIGEMSGVPYMVENPVSVLSRVFGKPSHTFDPCDYTAYEPLDNYTKKTCLWTG GGIPDAASQPGHEPAGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19322; Mature: 19322
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDTILCLCDLTGVMARPWVEHGYQAVLVDPQHGCDHEDGAYLKLACTIEEAFDQISVLV CCCCEEEEECHHHHHHCHHHHCCCEEEEECCCCCCCCCCCCEEEEEEEHHHHHHHHHHHH RSGRLAFVAGFPPCTDMAVSGAQWFARKYEADHMFQAKAVSVAEQCRVIGEMSGVPYMVE HCCCEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEC NPVSVLSRVFGKPSHTFDPCDYTAYEPLDNYTKKTCLWTGGGIPDAASQPGHEPAGS CHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCEEEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRDTILCLCDLTGVMARPWVEHGYQAVLVDPQHGCDHEDGAYLKLACTIEEAFDQISVLV CCCCEEEEECHHHHHHCHHHHCCCEEEEECCCCCCCCCCCCEEEEEEEHHHHHHHHHHHH RSGRLAFVAGFPPCTDMAVSGAQWFARKYEADHMFQAKAVSVAEQCRVIGEMSGVPYMVE HCCCEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEC NPVSVLSRVFGKPSHTFDPCDYTAYEPLDNYTKKTCLWTGGGIPDAASQPGHEPAGS CHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCEEEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA