| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692380
Identifier: 213692380
GI number: 213692380
Start: 1671159
End: 1672100
Strand: Direct
Name: 213692380
Synonym: Blon_1507
Alternate gene names: NA
Gene position: 1671159-1672100 (Clockwise)
Preceding gene: 213692379
Following gene: 213692381
Centisome position: 58.99
GC content: 55.1
Gene sequence:
>942_bases ATGACACAGGCGAGGAAGGGCCCACGACTGCCGTTGAACCGGTTGGGTGAGGCGATACTTGCCGGCTCGTGGCTGTCAAC CCAGTTGGGCAGACGATTGTATGCGGCTGAGGCGCAGACATTCGGACGCATGGTGTACGACGAGTGGGCGAAAACCCATC CGGGCACACTCCCCTACACGGTGAGAATCGATTCCAGTCAGAAAACCGCGTACCTGCCAGAAGACATGCCTCTGCTGCAT AAGGCGCTCACACGGTACACGAACAGCAGATCATACCAACGCATACAAGCGGAAATCAAAGGAGAAACACCAATGAGTGA GAAACCATTCTGGGAAGGCAAGACCTGCAAGGAGATGGCCGGACTGCACGTCAAGGCCACATGGAAGAACGGCACCATTG TTACTGGAGTGTTAGATGACGCAGGAGATATTAATTTAGGCGATAATTGGTCTTTGTACACGTCACGTGGCTATGACTCT TCCTGTGATTTTGAGCCAATAGACAATATCCAATCCATCGAACTGTTGGATGACCCCGAGTATGAGCGCATCGACAACAT CGAAAACGTGCAGGTGGGCGATATTGCCTGCACGACGGAGGGAAACCATTTCCGCGTCATCGATCTCAAGCCTGACCCTC TAGGCGACATGCTCCTGCGTATCCGCATCAGCGAGATAGACGGTGAGTACTGCATCGACTCCGATGATTTCGCCTACGCT TTGCGTCGGAAGCCGAAGCTGCCCGACCATGACGGGTTGTGGCGGGATAAGGACAATGCCTTGTGGAGCGTCGCCATCTC CGGCCTGGACAATTCGAAGTTGGTCGCTTTGCTTATCGGTGACCCGGAATCCCCCGTCACCGGGTCTGTTTGGTCGGGCC TCAACAGCAAGCACGTGACCTCTCAAGCTCCGTTCCGTCCGGCCAAGGCGGTGGAAGCATGA
Upstream 100 bases:
>100_bases AACTCTACAAACTGTTCTGTCGTGAATCATCGTTCAGGCCAGCCTTATACAAGCTAGACCCGGTGTTGTTTCGCCGGTTC ACGAACGGGGAGATTCGAGT
Downstream 100 bases:
>100_bases ACATCCACCCGATCATTGATAAACCTCCATCGTTTCCGCAAACTGTCTTACGCCTGCTCACAGGAAGCACTCATTGCTGT GACTGGTGCGAGAAACGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 313; Mature: 312
Protein sequence:
>313_residues MTQARKGPRLPLNRLGEAILAGSWLSTQLGRRLYAAEAQTFGRMVYDEWAKTHPGTLPYTVRIDSSQKTAYLPEDMPLLH KALTRYTNSRSYQRIQAEIKGETPMSEKPFWEGKTCKEMAGLHVKATWKNGTIVTGVLDDAGDINLGDNWSLYTSRGYDS SCDFEPIDNIQSIELLDDPEYERIDNIENVQVGDIACTTEGNHFRVIDLKPDPLGDMLLRIRISEIDGEYCIDSDDFAYA LRRKPKLPDHDGLWRDKDNALWSVAISGLDNSKLVALLIGDPESPVTGSVWSGLNSKHVTSQAPFRPAKAVEA
Sequences:
>Translated_313_residues MTQARKGPRLPLNRLGEAILAGSWLSTQLGRRLYAAEAQTFGRMVYDEWAKTHPGTLPYTVRIDSSQKTAYLPEDMPLLH KALTRYTNSRSYQRIQAEIKGETPMSEKPFWEGKTCKEMAGLHVKATWKNGTIVTGVLDDAGDINLGDNWSLYTSRGYDS SCDFEPIDNIQSIELLDDPEYERIDNIENVQVGDIACTTEGNHFRVIDLKPDPLGDMLLRIRISEIDGEYCIDSDDFAYA LRRKPKLPDHDGLWRDKDNALWSVAISGLDNSKLVALLIGDPESPVTGSVWSGLNSKHVTSQAPFRPAKAVEA >Mature_312_residues TQARKGPRLPLNRLGEAILAGSWLSTQLGRRLYAAEAQTFGRMVYDEWAKTHPGTLPYTVRIDSSQKTAYLPEDMPLLHK ALTRYTNSRSYQRIQAEIKGETPMSEKPFWEGKTCKEMAGLHVKATWKNGTIVTGVLDDAGDINLGDNWSLYTSRGYDSS CDFEPIDNIQSIELLDDPEYERIDNIENVQVGDIACTTEGNHFRVIDLKPDPLGDMLLRIRISEIDGEYCIDSDDFAYAL RRKPKLPDHDGLWRDKDNALWSVAISGLDNSKLVALLIGDPESPVTGSVWSGLNSKHVTSQAPFRPAKAVEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35016; Mature: 34885
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQARKGPRLPLNRLGEAILAGSWLSTQLGRRLYAAEAQTFGRMVYDEWAKTHPGTLPYT CCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE VRIDSSQKTAYLPEDMPLLHKALTRYTNSRSYQRIQAEIKGETPMSEKPFWEGKTCKEMA EEECCCCCEEECCCCHHHHHHHHHHHHCCCHHEEHHHEECCCCCCCCCCCCCCCCHHHHC GLHVKATWKNGTIVTGVLDDAGDINLGDNWSLYTSRGYDSSCDFEPIDNIQSIELLDDPE CCEEEEEECCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCC YERIDNIENVQVGDIACTTEGNHFRVIDLKPDPLGDMLLRIRISEIDGEYCIDSDDFAYA HHHHCCCCCEEECCEEEEECCCEEEEEEECCCCCCCEEEEEEEEECCCCEEECCCHHHHH LRRKPKLPDHDGLWRDKDNALWSVAISGLDNSKLVALLIGDPESPVTGSVWSGLNSKHVT HHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCCHHHCCCCCCCCC SQAPFRPAKAVEA CCCCCCCHHCCCC >Mature Secondary Structure TQARKGPRLPLNRLGEAILAGSWLSTQLGRRLYAAEAQTFGRMVYDEWAKTHPGTLPYT CCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE VRIDSSQKTAYLPEDMPLLHKALTRYTNSRSYQRIQAEIKGETPMSEKPFWEGKTCKEMA EEECCCCCEEECCCCHHHHHHHHHHHHCCCHHEEHHHEECCCCCCCCCCCCCCCCHHHHC GLHVKATWKNGTIVTGVLDDAGDINLGDNWSLYTSRGYDSSCDFEPIDNIQSIELLDDPE CCEEEEEECCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCC YERIDNIENVQVGDIACTTEGNHFRVIDLKPDPLGDMLLRIRISEIDGEYCIDSDDFAYA HHHHCCCCCEEECCEEEEECCCEEEEEEECCCCCCCEEEEEEEEECCCCEEECCCHHHHH LRRKPKLPDHDGLWRDKDNALWSVAISGLDNSKLVALLIGDPESPVTGSVWSGLNSKHVT HHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCCHHHCCCCCCCCC SQAPFRPAKAVEA CCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA