Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is 213692344

Identifier: 213692344

GI number: 213692344

Start: 1633622

End: 1634110

Strand: Reverse

Name: 213692344

Synonym: Blon_1470

Alternate gene names: NA

Gene position: 1634110-1633622 (Counterclockwise)

Preceding gene: 213692346

Following gene: 213692341

Centisome position: 57.69

GC content: 46.83

Gene sequence:

>489_bases
ATGACAGCAGAAGTGGATGACGGTTTCTTTCAATTGTTTGAACGCAGGATTTTTGTGCGTGGAGAAGCTTATTACGATGC
CGGCAAGGTTGATCCGCCGGTCATGATTGCTGAGAATCTTTGGCATACCGTGGTTCGCGGGAATGACGACTATCAAGTGG
ACATTCGTTTGCGCCATGGCAAAGTGATTTCTGCCGCCTGCACATGCCAATATTCCCAACGTGCAACGTACTGCAAGCAT
GTGGCTGCGGTGCTTATCTTCATGCGTGAGAGCCGACGTCGGGAATTAGATGAATCGCAAGACCAAGTTTCAGAGTTTCC
TCATGAAGCATTGAATTGTGTGAGATGGTATACGATGCATGAATTCCCGAAATATCGCGGATTGACAGAGGGAGATTGGC
ATGCTGTCAAGCGAATATTTGAGGTGTTGTACTGTATCCCCGACCTTGATATTACATATACACATGAGGTAATGGATACC
GTTTGGTGA

Upstream 100 bases:

>100_bases
TTGGTTCCGGGCGATGCTCGCAGCAATTGAAAATATCGCATGACATGACAAAAAGCGGGCGACAAGCGTTATCCTGAAAT
ACATAGGGCAAGGAGGCCGT

Downstream 100 bases:

>100_bases
CATCCATCTCGTAGGTAAACAGTTCGCTGTGGCCAAGACGCTGAGTCTCAGGGATATTCTCGTCCGCACCGAGTCCCACT
GCAATCACACGCCAACCCCG

Product: zinc finger, SWIM domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MTAEVDDGFFQLFERRIFVRGEAYYDAGKVDPPVMIAENLWHTVVRGNDDYQVDIRLRHGKVISAACTCQYSQRATYCKH
VAAVLIFMRESRRRELDESQDQVSEFPHEALNCVRWYTMHEFPKYRGLTEGDWHAVKRIFEVLYCIPDLDITYTHEVMDT
VW

Sequences:

>Translated_162_residues
MTAEVDDGFFQLFERRIFVRGEAYYDAGKVDPPVMIAENLWHTVVRGNDDYQVDIRLRHGKVISAACTCQYSQRATYCKH
VAAVLIFMRESRRRELDESQDQVSEFPHEALNCVRWYTMHEFPKYRGLTEGDWHAVKRIFEVLYCIPDLDITYTHEVMDT
VW
>Mature_161_residues
TAEVDDGFFQLFERRIFVRGEAYYDAGKVDPPVMIAENLWHTVVRGNDDYQVDIRLRHGKVISAACTCQYSQRATYCKHV
AAVLIFMRESRRRELDESQDQVSEFPHEALNCVRWYTMHEFPKYRGLTEGDWHAVKRIFEVLYCIPDLDITYTHEVMDTV
W

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19176; Mature: 19045

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: PS50966 ZF_SWIM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAEVDDGFFQLFERRIFVRGEAYYDAGKVDPPVMIAENLWHTVVRGNDDYQVDIRLRHG
CCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECC
KVISAACTCQYSQRATYCKHVAAVLIFMRESRRRELDESQDQVSEFPHEALNCVRWYTMH
EEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHHH
EFPKYRGLTEGDWHAVKRIFEVLYCIPDLDITYTHEVMDTVW
HHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEHHHHHHHCC
>Mature Secondary Structure 
TAEVDDGFFQLFERRIFVRGEAYYDAGKVDPPVMIAENLWHTVVRGNDDYQVDIRLRHG
CCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECC
KVISAACTCQYSQRATYCKHVAAVLIFMRESRRRELDESQDQVSEFPHEALNCVRWYTMH
EEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHHH
EFPKYRGLTEGDWHAVKRIFEVLYCIPDLDITYTHEVMDTVW
HHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA