| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is bcp [H]
Identifier: 213692346
GI number: 213692346
Start: 1635236
End: 1635781
Strand: Reverse
Name: bcp [H]
Synonym: Blon_1472
Alternate gene names: 213692346
Gene position: 1635781-1635236 (Counterclockwise)
Preceding gene: 213692347
Following gene: 213692344
Centisome position: 57.75
GC content: 56.59
Gene sequence:
>546_bases ATGGGAATCATGACCACTACTGTTGATAGCTCTGATTCAATGCCGGAACGTCTGCAAGAGGGGAGCGTGGCGCCCGATTT CACTCTGCCGGCGGTTATACCTGGGTTTACAGAGAGCGGATCAATCAACCTGTCTGACGTGCTTGATGCCGGCCGCAGGG TTGTACTGTACTTCTACCCGGCCGCGATGACGCCCGGATGCACCACCGAGGCCTGCGATTTCCGCGACAATCTCGCCCGA TTGGCGTCGAAGAATGTCACAGTGCTCGGTGTCTCCAAGGATTCACTTGACAAGCTGCGCAAGTTTGCACAGCGTGATCA TCTCACGTTCCCGCTGCTGTCTGATCCCGACCTGACCGTGCACAAGCTGTACGGCGCATACGGCGAAAAGAAGCTCTACG GCAAGGTGCACGTAGGCGTGATCCGCTCGACGCTCGTCATCAATCCCGATGGCTCCGTGGCGATTGCGCGCTACAACGTG CGTGCCAAAGGACATGTCGATTCGCTGTTAAAGGCACTGGAAAAGTTGGAGAAGCTGGAGAAGTAG
Upstream 100 bases:
>100_bases TCGAACATTGCCGGTGTTGCAGAATCGCCGTTTTGCCGATCCGCAGTTGTGTGACTGACCTCTGAATAACTTTACTAGCG CTGTTGATAAGGGTTCTATG
Downstream 100 bases:
>100_bases CGCGTTCTCGTTGCTCGGACACAGTGGTTCGTGCATAGCAGTTCCGTGCGGTATGTGCCGCATGAACCACTGCCGTATGA ACCACCGGTTGACTTCTCGG
Product: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen
Products: NA
Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MGIMTTTVDSSDSMPERLQEGSVAPDFTLPAVIPGFTESGSINLSDVLDAGRRVVLYFYPAAMTPGCTTEACDFRDNLAR LASKNVTVLGVSKDSLDKLRKFAQRDHLTFPLLSDPDLTVHKLYGAYGEKKLYGKVHVGVIRSTLVINPDGSVAIARYNV RAKGHVDSLLKALEKLEKLEK
Sequences:
>Translated_181_residues MGIMTTTVDSSDSMPERLQEGSVAPDFTLPAVIPGFTESGSINLSDVLDAGRRVVLYFYPAAMTPGCTTEACDFRDNLAR LASKNVTVLGVSKDSLDKLRKFAQRDHLTFPLLSDPDLTVHKLYGAYGEKKLYGKVHVGVIRSTLVINPDGSVAIARYNV RAKGHVDSLLKALEKLEKLEK >Mature_180_residues GIMTTTVDSSDSMPERLQEGSVAPDFTLPAVIPGFTESGSINLSDVLDAGRRVVLYFYPAAMTPGCTTEACDFRDNLARL ASKNVTVLGVSKDSLDKLRKFAQRDHLTFPLLSDPDLTVHKLYGAYGEKKLYGKVHVGVIRSTLVINPDGSVAIARYNVR AKGHVDSLLKALEKLEKLEK
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI1788825, Length=158, Percent_Identity=39.873417721519, Blast_Score=127, Evalue=6e-31, Organism=Saccharomyces cerevisiae, GI6322180, Length=165, Percent_Identity=34.5454545454545, Blast_Score=77, Evalue=2e-15,
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 19756; Mature: 19625
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIMTTTVDSSDSMPERLQEGSVAPDFTLPAVIPGFTESGSINLSDVLDAGRRVVLYFYP CCEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHCCCEEEEEEEC AAMTPGCTTEACDFRDNLARLASKNVTVLGVSKDSLDKLRKFAQRDHLTFPLLSDPDLTV CCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCHH HKLYGAYGEKKLYGKVHVGVIRSTLVINPDGSVAIARYNVRAKGHVDSLLKALEKLEKLE HHHHCCCCCCEEECEEEEEEEEEEEEECCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHC K C >Mature Secondary Structure GIMTTTVDSSDSMPERLQEGSVAPDFTLPAVIPGFTESGSINLSDVLDAGRRVVLYFYP CEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHCCCEEEEEEEC AAMTPGCTTEACDFRDNLARLASKNVTVLGVSKDSLDKLRKFAQRDHLTFPLLSDPDLTV CCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCHH HKLYGAYGEKKLYGKVHVGVIRSTLVINPDGSVAIARYNVRAKGHVDSLLKALEKLEKLE HHHHCCCCCCEEECEEEEEEEEEEEEECCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHC K C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]