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The map label for this gene is 213692339

Identifier: 213692339

GI number: 213692339

Start: 1626933

End: 1627571

Strand: Reverse

Name: 213692339

Synonym: Blon_1465

Alternate gene names: NA

Gene position: 1627571-1626933 (Counterclockwise)

Preceding gene: 213692341

Following gene: 213692338

Centisome position: 57.46

GC content: 56.18

Gene sequence:

>639_bases
ATGGCAGGCAATGGCAACACGGCATTTCGTTTCCGAGTCACTTTGCGCCTTGACGGGCGCGAATGCTGGCGGGAGATTCT
GGTGCCGGCATCATTGACGTTCTTTGATTTGCATGCGGTATTGCAGGAATGCTTTATGTGGTACGGCGAGCATCTGTTCT
GCTTCTGCGCCACATTCCCGGATGGGAAGCAGGTGCAAGTGGAAGAATTGTGGGGAGAAGAGCCCTCATACCATGAGGCG
AGATACGAACAATATATGCCGGTAGAGCCGTTGCCGGAAGTTCGCATTGCTTCGGAAACCGAGCTGGGCGACGTGTTTCC
CAAGGCGCGTACCGCTCGCTATTACTACGATTATGGTGACGATTGGATCCATGACATCAAGCTGCTGCGTACCTACCGCA
GCGTGCACGTTGCGGATCCTCAGCTTTGGGATGGGGCGGGGGATGCGCCTCCGGAGGATGTCGGCGGGGCGTATGGGTTC
GAGCGGTTCCTTGATACCTTGGGCAATCCCGAAGATGAAGAACATGATGGCACGGTTGAGTGGGCCGAGGACCAGATGTG
GGATCGTTTCACGCTGAACCGCCATCGTGAGCGTCTGTTCCGTTGGCACAAGCACCGTGACATGATGTTGCATGGGTGA

Upstream 100 bases:

>100_bases
TTCGGCCTTTTCTGAGGGCGCGAATCAGATTCGTAATGCAGTGGTTTGCCCTGGACTCTGTTACGGTGATAATAACTTCA
TCGTTGATAAGGGAGTCTTC

Downstream 100 bases:

>100_bases
TGCTGAACAGATGATAGCCGAACTGCATTAGGCTACTACGTCCCACACCGTAATGTATGACCAATCATTAGGAGGCCCGT
CATGACTGCCCATTTCGACG

Product: plasmid pRiA4b ORF-3 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MAGNGNTAFRFRVTLRLDGRECWREILVPASLTFFDLHAVLQECFMWYGEHLFCFCATFPDGKQVQVEELWGEEPSYHEA
RYEQYMPVEPLPEVRIASETELGDVFPKARTARYYYDYGDDWIHDIKLLRTYRSVHVADPQLWDGAGDAPPEDVGGAYGF
ERFLDTLGNPEDEEHDGTVEWAEDQMWDRFTLNRHRERLFRWHKHRDMMLHG

Sequences:

>Translated_212_residues
MAGNGNTAFRFRVTLRLDGRECWREILVPASLTFFDLHAVLQECFMWYGEHLFCFCATFPDGKQVQVEELWGEEPSYHEA
RYEQYMPVEPLPEVRIASETELGDVFPKARTARYYYDYGDDWIHDIKLLRTYRSVHVADPQLWDGAGDAPPEDVGGAYGF
ERFLDTLGNPEDEEHDGTVEWAEDQMWDRFTLNRHRERLFRWHKHRDMMLHG
>Mature_211_residues
AGNGNTAFRFRVTLRLDGRECWREILVPASLTFFDLHAVLQECFMWYGEHLFCFCATFPDGKQVQVEELWGEEPSYHEAR
YEQYMPVEPLPEVRIASETELGDVFPKARTARYYYDYGDDWIHDIKLLRTYRSVHVADPQLWDGAGDAPPEDVGGAYGFE
RFLDTLGNPEDEEHDGTVEWAEDQMWDRFTLNRHRERLFRWHKHRDMMLHG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To A.rhizogenes plasmid pRia4B ORF-3 in virA region [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012912 [H]

Pfam domain/function: PF07929 PRiA4_ORF3 [H]

EC number: NA

Molecular weight: Translated: 25100; Mature: 24969

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGNGNTAFRFRVTLRLDGRECWREILVPASLTFFDLHAVLQECFMWYGEHLFCFCATFP
CCCCCCEEEEEEEEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECC
DGKQVQVEELWGEEPSYHEARYEQYMPVEPLPEVRIASETELGDVFPKARTARYYYDYGD
CCCEEEHHHHCCCCCCHHHHHHHHCCCCCCCCCCEECCCCCHHHHCCCCCCEEEEECCCC
DWIHDIKLLRTYRSVHVADPQLWDGAGDAPPEDVGGAYGFERFLDTLGNPEDEEHDGTVE
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHCCCCCCCCCCCEE
WAEDQMWDRFTLNRHRERLFRWHKHRDMMLHG
ECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AGNGNTAFRFRVTLRLDGRECWREILVPASLTFFDLHAVLQECFMWYGEHLFCFCATFP
CCCCCEEEEEEEEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECC
DGKQVQVEELWGEEPSYHEARYEQYMPVEPLPEVRIASETELGDVFPKARTARYYYDYGD
CCCEEEHHHHCCCCCCHHHHHHHHCCCCCCCCCCEECCCCCHHHHCCCCCCEEEEECCCC
DWIHDIKLLRTYRSVHVADPQLWDGAGDAPPEDVGGAYGFERFLDTLGNPEDEEHDGTVE
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHCCCCCCCCCCCEE
WAEDQMWDRFTLNRHRERLFRWHKHRDMMLHG
ECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]