| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is tenA [H]
Identifier: 213692335
GI number: 213692335
Start: 1621317
End: 1622051
Strand: Reverse
Name: tenA [H]
Synonym: Blon_1460
Alternate gene names: 213692335
Gene position: 1622051-1621317 (Counterclockwise)
Preceding gene: 213692338
Following gene: 213692334
Centisome position: 57.26
GC content: 60.82
Gene sequence:
>735_bases ATGTCTTTTGACGCCGTCGCATTCGGCCCGATCACCCTGAACCACCTGCCGCCGTTCGCCCAGCGCCTGCGCCAGGCCTC CGACCTGGTCTGGGAGGAGGGCTACCGGCAGCCGTTCCTGCGCGAGCTGGGTCACGGCACGCTTTCGCGCGAGCGCTTCG CGTTCTACCTGCTGCAGGATTACCGCTACCTGAACGATTACGCCAAGGTGCACGCGCTGGCGTTGACCAAGACCCAGGAT CCCGAGGTCATGCGGTTCATGGCGGATGTGCAGAACGGCATCTTCAATGTGGAATCCGCCATGCATCGTAAATACATGGC GAGCTACGGCATCAGCGAGCAGGAGATGAACTCGGTGCGCCAGTCTGCGTTCGCCCGCGCCTACACGTCGAACATCCTGT CGATCGCATACGGCAATCCGCTGGTTGATATCCTGGTCGCCGTGCTGCCCTGCGCCTGGGTGTACGCCGACTACGGTCAG CGTCTCGCCGCCGAATTCGCGGACACGCTCGATGCCAACCCGTACAAGAGCTGGGTGGACATGTACAAGACCGAGGAGTT CTGGAGTAGCTCGGCGTGGCTGATTGAACACATCGAACAGCTCGTGGAGGGTTTGAACGAAGAGCGCCGGGCCGAGCTCG TGGACATCTTCGTGACCGGTGTGCAGAACGAATACCTGTTCTGGTCAAGCGCCTACGACATACAGTACACGTGGAAACCC GAATGGGATGTGTGA
Upstream 100 bases:
>100_bases GAATGCAAGCTGCCGGCCATCGTGGTGGCGAACGGGTTGAGAAAGGCGCTGTGCCTGACCCTTGGAGCCTGTTGGCCAAC ACCATCGAAGGGGGCAAACG
Downstream 100 bases:
>100_bases GGCGCACGATGGATGAGCGGTGGGCGCGTGCTTTGCACGCCAAGGGCATTGATATTGACGAGGCTGAAGGTGCTGGTGGG AAACGGGCGCACGACGGCAA
Product: transcriptional activator, TenA family
Products: NA
Alternate protein names: Thiaminase II; Transcriptional activator tenA [H]
Number of amino acids: Translated: 244; Mature: 243
Protein sequence:
>244_residues MSFDAVAFGPITLNHLPPFAQRLRQASDLVWEEGYRQPFLRELGHGTLSRERFAFYLLQDYRYLNDYAKVHALALTKTQD PEVMRFMADVQNGIFNVESAMHRKYMASYGISEQEMNSVRQSAFARAYTSNILSIAYGNPLVDILVAVLPCAWVYADYGQ RLAAEFADTLDANPYKSWVDMYKTEEFWSSSAWLIEHIEQLVEGLNEERRAELVDIFVTGVQNEYLFWSSAYDIQYTWKP EWDV
Sequences:
>Translated_244_residues MSFDAVAFGPITLNHLPPFAQRLRQASDLVWEEGYRQPFLRELGHGTLSRERFAFYLLQDYRYLNDYAKVHALALTKTQD PEVMRFMADVQNGIFNVESAMHRKYMASYGISEQEMNSVRQSAFARAYTSNILSIAYGNPLVDILVAVLPCAWVYADYGQ RLAAEFADTLDANPYKSWVDMYKTEEFWSSSAWLIEHIEQLVEGLNEERRAELVDIFVTGVQNEYLFWSSAYDIQYTWKP EWDV >Mature_243_residues SFDAVAFGPITLNHLPPFAQRLRQASDLVWEEGYRQPFLRELGHGTLSRERFAFYLLQDYRYLNDYAKVHALALTKTQDP EVMRFMADVQNGIFNVESAMHRKYMASYGISEQEMNSVRQSAFARAYTSNILSIAYGNPLVDILVAVLPCAWVYADYGQR LAAEFADTLDANPYKSWVDMYKTEEFWSSSAWLIEHIEQLVEGLNEERRAELVDIFVTGVQNEYLFWSSAYDIQYTWKPE WDV
Specific function: Stimulates the production of several extracellular degradative enzymes at the transcriptional level, probably by interfering with degS and degU, which are required for this effect. Is not an essential protein, but affects the sporulation frequency [H]
COG id: COG0819
COG function: function code K; Putative transcription activator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiaminase-2 family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6324517, Length=208, Percent_Identity=23.5576923076923, Blast_Score=68, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6325378, Length=207, Percent_Identity=23.1884057971014, Blast_Score=65, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016084 - InterPro: IPR004305 [H]
Pfam domain/function: PF03070 TENA_THI-4 [H]
EC number: =3.5.99.2 [H]
Molecular weight: Translated: 28382; Mature: 28251
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFDAVAFGPITLNHLPPFAQRLRQASDLVWEEGYRQPFLRELGHGTLSRERFAFYLLQD CCCCCEEECCEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHH YRYLNDYAKVHALALTKTQDPEVMRFMADVQNGIFNVESAMHRKYMASYGISEQEMNSVR HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHH QSAFARAYTSNILSIAYGNPLVDILVAVLPCAWVYADYGQRLAAEFADTLDANPYKSWVD HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH MYKTEEFWSSSAWLIEHIEQLVEGLNEERRAELVDIFVTGVQNEYLFWSSAYDIQYTWKP HHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEECCEEEEEECCC EWDV CCCC >Mature Secondary Structure SFDAVAFGPITLNHLPPFAQRLRQASDLVWEEGYRQPFLRELGHGTLSRERFAFYLLQD CCCCEEECCEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHH YRYLNDYAKVHALALTKTQDPEVMRFMADVQNGIFNVESAMHRKYMASYGISEQEMNSVR HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHH QSAFARAYTSNILSIAYGNPLVDILVAVLPCAWVYADYGQRLAAEFADTLDANPYKSWVD HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH MYKTEEFWSSSAWLIEHIEQLVEGLNEERRAELVDIFVTGVQNEYLFWSSAYDIQYTWKP HHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEECCEEEEEECCC EWDV CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1898926; 9384377 [H]