| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is pyrE [H]
Identifier: 213692320
GI number: 213692320
Start: 1603923
End: 1604618
Strand: Reverse
Name: pyrE [H]
Synonym: Blon_1445
Alternate gene names: 213692320
Gene position: 1604618-1603923 (Counterclockwise)
Preceding gene: 213692321
Following gene: 213692319
Centisome position: 56.65
GC content: 63.22
Gene sequence:
>696_bases ATGGCAGAAACACTCGCACATCGCTTCACTGAATTCCTGTTGGAATCCAACGCGCTGAAGTTCGGCGACTTCACGCTGAA GTCCGGCCGCAAGAGCCCGTACTTCATCAACGCCGGCGCCTTCGACGACGGCAAGAAGATCGCCGCGCTCGGCGCGTTCT ACGCCGAAAAGATTAGCCAGGCCATCGTGCACAACACGATTCCCCGCAACATCGACACCGTGTTCGGCCCCGCCTACAAG GGCATTCCGCTGGCCGTGTCCACCGCGATCGCGCTGAACGCCGGCCACAACATGACCGTTGGATACACCTTCGACCGCAA GGAGAAGAAGGACCACGGCGACGGCGGCTGGATGGTCGGCACCCCGCTGACCGACGGCATGAAGGTGCTGCTCGTGGACG ACGTGATGACCGCCGGCACCGCCGTGCGCGAAGTCATCCCCAAGCTCAAGGCCGAGGCGAACGTCGAGGTCGTGGGTCTC GTGCTCTCCGTGGACCGCATGGAGAAGACCAAGGACTCCGACCTGTCCGCCGTGAAGGCCGTGGAAGCCGAATTCGGCTT CCCGGTGCTCTCCATCGCCAACGTGCGCGAGATCTTCGACGCCGCCGCCAAGATGAAGAACTCCGACGGCACCCCATTGC TCAGCCACGATATCCAGCAGCGCGCCGCCGCCTACCTTGAGGAATACGGCGCCTGA
Upstream 100 bases:
>100_bases CCCCGCTGCGCGTCGCCCGCGAACTCGACTACCTGCTGGACAGCCGTCCCGAACTCGCTGCTAAACTGGCCGCAGGACAG ACTTGGAGGTAAGGAACATC
Downstream 100 bases:
>100_bases TCGTCTTCAACCTAAAACCAAAAGCGGGCTTGCGAGCCCGCTTTTTTTATTACGATCCATGAACAGCAGTACCATATTAA GGCAGAAGCTTTGGCAAGGA
Product: orotate phosphoribosyltransferase
Products: NA
Alternate protein names: OPRT; OPRTase [H]
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MAETLAHRFTEFLLESNALKFGDFTLKSGRKSPYFINAGAFDDGKKIAALGAFYAEKISQAIVHNTIPRNIDTVFGPAYK GIPLAVSTAIALNAGHNMTVGYTFDRKEKKDHGDGGWMVGTPLTDGMKVLLVDDVMTAGTAVREVIPKLKAEANVEVVGL VLSVDRMEKTKDSDLSAVKAVEAEFGFPVLSIANVREIFDAAAKMKNSDGTPLLSHDIQQRAAAYLEEYGA
Sequences:
>Translated_231_residues MAETLAHRFTEFLLESNALKFGDFTLKSGRKSPYFINAGAFDDGKKIAALGAFYAEKISQAIVHNTIPRNIDTVFGPAYK GIPLAVSTAIALNAGHNMTVGYTFDRKEKKDHGDGGWMVGTPLTDGMKVLLVDDVMTAGTAVREVIPKLKAEANVEVVGL VLSVDRMEKTKDSDLSAVKAVEAEFGFPVLSIANVREIFDAAAKMKNSDGTPLLSHDIQQRAAAYLEEYGA >Mature_230_residues AETLAHRFTEFLLESNALKFGDFTLKSGRKSPYFINAGAFDDGKKIAALGAFYAEKISQAIVHNTIPRNIDTVFGPAYKG IPLAVSTAIALNAGHNMTVGYTFDRKEKKDHGDGGWMVGTPLTDGMKVLLVDDVMTAGTAVREVIPKLKAEANVEVVGLV LSVDRMEKTKDSDLSAVKAVEAEFGFPVLSIANVREIFDAAAKMKNSDGTPLLSHDIQQRAAAYLEEYGA
Specific function: Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) [H]
COG id: COG0461
COG function: function code F; Orotate phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrE subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790073, Length=192, Percent_Identity=47.3958333333333, Blast_Score=176, Evalue=1e-45, Organism=Saccharomyces cerevisiae, GI6323530, Length=237, Percent_Identity=38.8185654008439, Blast_Score=154, Evalue=8e-39, Organism=Saccharomyces cerevisiae, GI6323927, Length=202, Percent_Identity=41.5841584158416, Blast_Score=146, Evalue=3e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004467 - InterPro: IPR023031 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.4.2.10 [H]
Molecular weight: Translated: 24929; Mature: 24798
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAETLAHRFTEFLLESNALKFGDFTLKSGRKSPYFINAGAFDDGKKIAALGAFYAEKISQ CCHHHHHHHHHHHHHCCCCEECCEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHH AIVHNTIPRNIDTVFGPAYKGIPLAVSTAIALNAGHNMTVGYTFDRKEKKDHGDGGWMVG HHHHHCCCCCCHHHHCCCCCCCCCEEHEEEEEECCCCEEEEEEECCCCCCCCCCCCEEEC TPLTDGMKVLLVDDVMTAGTAVREVIPKLKAEANVEVVGLVLSVDRMEKTKDSDLSAVKA CCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEHHHHHHCCCCHHHHHHH VEAEFGFPVLSIANVREIFDAAAKMKNSDGTPLLSHDIQQRAAAYLEEYGA HHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AETLAHRFTEFLLESNALKFGDFTLKSGRKSPYFINAGAFDDGKKIAALGAFYAEKISQ CHHHHHHHHHHHHHCCCCEECCEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHH AIVHNTIPRNIDTVFGPAYKGIPLAVSTAIALNAGHNMTVGYTFDRKEKKDHGDGGWMVG HHHHHCCCCCCHHHHCCCCCCCCCEEHEEEEEECCCCEEEEEEECCCCCCCCCCCCEEEC TPLTDGMKVLLVDDVMTAGTAVREVIPKLKAEANVEVVGLVLSVDRMEKTKDSDLSAVKA CCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEHHHHHHCCCCHHHHHHH VEAEFGFPVLSIANVREIFDAAAKMKNSDGTPLLSHDIQQRAAAYLEEYGA HHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA