| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692312
Identifier: 213692312
GI number: 213692312
Start: 1593999
End: 1594367
Strand: Direct
Name: 213692312
Synonym: Blon_1436
Alternate gene names: NA
Gene position: 1593999-1594367 (Clockwise)
Preceding gene: 213692311
Following gene: 213692313
Centisome position: 56.27
GC content: 56.91
Gene sequence:
>369_bases TTGCATTGCGCGACTATCTGTACGAGTCGTCTGAACGACCTGCTGGGAGTGCCCTTCGCGGAAAACCAACAGCAGACCGG AGGCCGCATCCACTATGTGTTGTTCAACCCTTGGACCGTGCGCAGCAATGGGGCATTGAACAGTTGCGATTCGCCACTGA TGAAGCTGCTGGTGCGTGCCATTTACGCCATTGTGGGCGTCAGCGTCGAGGAAGCGATCGTTTCCATCGCCCATCTGATC GACAACCCGCCGCACGCGGCGCTGTCGGCGTTCATCAAGACCAAACCCGTCGATCTCACTATGAACACCTTCAACAGGGG CACGGCGGTTCGGTTGGACGATATCACCAAAAAGCTGCTGAATCGCTAG
Upstream 100 bases:
>100_bases GGACACGATGATCGCACTAGTCGAGAACTTCCTCATACGGCACGAATCACAGGAGATCAATTGAGAGACCGTCAATGAAG GGTGTGCATCAATCACGTTC
Downstream 100 bases:
>100_bases CTGTCATAGCACAAGGCCTTAGGCAGAACACCCGGAAATCGAATGGGTAGATGGATCGTGTCTCCCCTTGACTTCCGGCA AGCGCACGCCAATCATGGGT
Product: oxidoreductase
Products: NA
Alternate protein names: Short-Chain Dehydrogenase/Reductase SDR
Number of amino acids: Translated: 122; Mature: 122
Protein sequence:
>122_residues MHCATICTSRLNDLLGVPFAENQQQTGGRIHYVLFNPWTVRSNGALNSCDSPLMKLLVRAIYAIVGVSVEEAIVSIAHLI DNPPHAALSAFIKTKPVDLTMNTFNRGTAVRLDDITKKLLNR
Sequences:
>Translated_122_residues MHCATICTSRLNDLLGVPFAENQQQTGGRIHYVLFNPWTVRSNGALNSCDSPLMKLLVRAIYAIVGVSVEEAIVSIAHLI DNPPHAALSAFIKTKPVDLTMNTFNRGTAVRLDDITKKLLNR >Mature_122_residues MHCATICTSRLNDLLGVPFAENQQQTGGRIHYVLFNPWTVRSNGALNSCDSPLMKLLVRAIYAIVGVSVEEAIVSIAHLI DNPPHAALSAFIKTKPVDLTMNTFNRGTAVRLDDITKKLLNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13415; Mature: 13415
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHCATICTSRLNDLLGVPFAENQQQTGGRIHYVLFNPWTVRSNGALNSCDSPLMKLLVRA CCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCEEEECCCCCCCCCHHHHHHHHHH IYAIVGVSVEEAIVSIAHLIDNPPHAALSAFIKTKPVDLTMNTFNRGTAVRLDDITKKLL HHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEECCCCCCCEEEHHHHHHHHH NR CC >Mature Secondary Structure MHCATICTSRLNDLLGVPFAENQQQTGGRIHYVLFNPWTVRSNGALNSCDSPLMKLLVRA CCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCEEEECCCCCCCCCHHHHHHHHHH IYAIVGVSVEEAIVSIAHLIDNPPHAALSAFIKTKPVDLTMNTFNRGTAVRLDDITKKLL HHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEECCCCCCCEEEHHHHHHHHH NR CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA