| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is yeaO [H]
Identifier: 213692313
GI number: 213692313
Start: 1594462
End: 1594812
Strand: Direct
Name: yeaO [H]
Synonym: Blon_1437
Alternate gene names: 213692313
Gene position: 1594462-1594812 (Clockwise)
Preceding gene: 213692312
Following gene: 213692315
Centisome position: 56.29
GC content: 59.26
Gene sequence:
>351_bases ATGGGTCGTATGGGGATTGCAATCAAACACATATATGAAGAACCGACTGCGTCGGACGGGTATCGGGTGCTGGTGGATCG CCTGTGGCCGCGCGGCATGACGAAGGAACGCGCGACGCTGGACCTGTGGATGAAGGACGTCGCTCCCTCTCCCCTCCTGC GCAAATGGTTCGGCCACGATCCCACAAGATTCGCCGAATTCCGCACGCGTTACATCGCAGAGCTCGATGCCAATGCCACA GTGGACAGTCTGCGCCGCATCTGCGCGCAACATCCCGACGTGACCCTGCTCTACGCCGCCAAAGACCCGCATATCAATCA CGCCCTCGTGCTGCGCGATTATCTTGATTGA
Upstream 100 bases:
>100_bases CGCTAGCTGTCATAGCACAAGGCCTTAGGCAGAACACCCGGAAATCGAATGGGTAGATGGATCGTGTCTCCCCTTGACTT CCGGCAAGCGCACGCCAATC
Downstream 100 bases:
>100_bases ATATTGAATCAAGACAATCGTCGTTTCAGTCCATCTGCGAGATTTTCGCCGATTTTCGTATCCTTGAATCGAAGCGCACA GTCGTCACTCCTTGGATTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 116; Mature: 115
Protein sequence:
>116_residues MGRMGIAIKHIYEEPTASDGYRVLVDRLWPRGMTKERATLDLWMKDVAPSPLLRKWFGHDPTRFAEFRTRYIAELDANAT VDSLRRICAQHPDVTLLYAAKDPHINHALVLRDYLD
Sequences:
>Translated_116_residues MGRMGIAIKHIYEEPTASDGYRVLVDRLWPRGMTKERATLDLWMKDVAPSPLLRKWFGHDPTRFAEFRTRYIAELDANAT VDSLRRICAQHPDVTLLYAAKDPHINHALVLRDYLD >Mature_115_residues GRMGIAIKHIYEEPTASDGYRVLVDRLWPRGMTKERATLDLWMKDVAPSPLLRKWFGHDPTRFAEFRTRYIAELDANATV DSLRRICAQHPDVTLLYAAKDPHINHALVLRDYLD
Specific function: Unknown
COG id: COG3189
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv3073c [H]
Homologues:
Organism=Escherichia coli, GI87081976, Length=112, Percent_Identity=45.5357142857143, Blast_Score=96, Evalue=4e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007438 [H]
Pfam domain/function: PF04343 DUF488 [H]
EC number: NA
Molecular weight: Translated: 13463; Mature: 13331
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRMGIAIKHIYEEPTASDGYRVLVDRLWPRGMTKERATLDLWMKDVAPSPLLRKWFGHD CCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCC PTRFAEFRTRYIAELDANATVDSLRRICAQHPDVTLLYAAKDPHINHALVLRDYLD CHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCHHEEEEECCC >Mature Secondary Structure GRMGIAIKHIYEEPTASDGYRVLVDRLWPRGMTKERATLDLWMKDVAPSPLLRKWFGHD CCCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCC PTRFAEFRTRYIAELDANATVDSLRRICAQHPDVTLLYAAKDPHINHALVLRDYLD CHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCHHEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]