| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692303
Identifier: 213692303
GI number: 213692303
Start: 1586791
End: 1587477
Strand: Direct
Name: 213692303
Synonym: Blon_1426
Alternate gene names: NA
Gene position: 1586791-1587477 (Clockwise)
Preceding gene: 213692299
Following gene: 213692304
Centisome position: 56.02
GC content: 60.7
Gene sequence:
>687_bases ATGCTGGCTTCCGGATTCGTAGCGCTTGCCATCTGGCCGCGCGAGGAATCCTCAAAGGACATGGAACGCACCAAGATGAC GCTCAAGGATCTCGCTGTCTCCTTCCACTTCCCGAAGTTCTCCACCTCGCGCGACTTCTACAAGGCGTTCGGCTGCCGAG TGTGCATGTTGCTCAGCTACCAGATGATCTCCGTGTACCAACTCTACATCGTCGAGGATTACGTGCACCAGACCAAGACC GAGGCTGCCGGCACCATCGCCACCATGTCCATCACCACCATGGTCGTTTCCCTGACCGCTTCGCTGATCTCCGGCCCGAT CTCCGACAAGATGCACACGCGCAAGGTACCAGTCATCATCGCCTCGCTGCTGTTCGCGATTGGCACCGCGATGCCGTGGA TCATGCCGAGCGTCACGGGCATGTACCTGTATGCGGGCATCGCCGGCTTCGGCTACGGCGTGTACTCAGCCATCGACCAA GCGCTCAACGTCGACGTGCTGCCGAACAAGGAAGAGGCCGGTAAGGACCTCGGCATCCTCAACCTGGCCACCACGCTCGG CCAGGCGGTGGGCCCCACCATCACCTCGACGGTAAAGACCGCGACCGGAGCTTTACGCCTGCATTCGCCATCTCCATCAT CATGGCCGTGTGCGCCGCCGTGTTCGTGCTGCGCATTCAGAAGGTGA
Upstream 100 bases:
>100_bases CTACGGCGGCGGCATGGTCGTCGGCCAGCCCATCGGCACCATGATCGGCTCTCGCATGATCAACAATGCGTAAGCCGGCT TCATCATCGGCGCCGTGATC
Downstream 100 bases:
>100_bases AGTAGACGCTGCAAAGTGCCCATCTCCGTTTCGAGGGGCTGATGCCAAAGTAGCTACTGGTCAAAAACAACGGAATGACA TTGGAGTAATGCCATTTCTA
Product: hypothetical protein
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Facilitator Superfamily Transporter; Sucrose Transporter; Sugar Transporter; Transporter Facilitator Family; Efflux Transporter; Facilitator Superfamily Permease; Facilitator Sugar Transporter; Na+/Melibiose Symporter-Like Transporter; Permease; Sucrose Symporter; Facilitator Superfamily; Sucrose Transporter ScrT; Na+/Sugar Transporter; Multidrug-Efflux Transporter; Florfenicol/Chloramphenicol Resistance Transporter Protein; MFS-Type Transporter; MFS Superfamily Transporter
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MLASGFVALAIWPREESSKDMERTKMTLKDLAVSFHFPKFSTSRDFYKAFGCRVCMLLSYQMISVYQLYIVEDYVHQTKT EAAGTIATMSITTMVVSLTASLISGPISDKMHTRKVPVIIASLLFAIGTAMPWIMPSVTGMYLYAGIAGFGYGVYSAIDQ ALNVDVLPNKEEAGKDLGILNLATTLGQAVGPTITSTVKTATGALRLHSPSPSSWPCAPPCSCCAFRR
Sequences:
>Translated_228_residues MLASGFVALAIWPREESSKDMERTKMTLKDLAVSFHFPKFSTSRDFYKAFGCRVCMLLSYQMISVYQLYIVEDYVHQTKT EAAGTIATMSITTMVVSLTASLISGPISDKMHTRKVPVIIASLLFAIGTAMPWIMPSVTGMYLYAGIAGFGYGVYSAIDQ ALNVDVLPNKEEAGKDLGILNLATTLGQAVGPTITSTVKTATGALRLHSPSPSSWPCAPPCSCCAFRR >Mature_228_residues MLASGFVALAIWPREESSKDMERTKMTLKDLAVSFHFPKFSTSRDFYKAFGCRVCMLLSYQMISVYQLYIVEDYVHQTKT EAAGTIATMSITTMVVSLTASLISGPISDKMHTRKVPVIIASLLFAIGTAMPWIMPSVTGMYLYAGIAGFGYGVYSAIDQ ALNVDVLPNKEEAGKDLGILNLATTLGQAVGPTITSTVKTATGALRLHSPSPSSWPCAPPCSCCAFRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24685; Mature: 24685
Theoretical pI: Translated: 8.57; Mature: 8.57
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLASGFVALAIWPREESSKDMERTKMTLKDLAVSFHFPKFSTSRDFYKAFGCRVCMLLSY CCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH QMISVYQLYIVEDYVHQTKTEAAGTIATMSITTMVVSLTASLISGPISDKMHTRKVPVII HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH ASLLFAIGTAMPWIMPSVTGMYLYAGIAGFGYGVYSAIDQALNVDVLPNKEEAGKDLGIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHH NLATTLGQAVGPTITSTVKTATGALRLHSPSPSSWPCAPPCSCCAFRR HHHHHHHHHHCCHHHHHHHHHHCEEEEECCCCCCCCCCCCHHHHCCCC >Mature Secondary Structure MLASGFVALAIWPREESSKDMERTKMTLKDLAVSFHFPKFSTSRDFYKAFGCRVCMLLSY CCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH QMISVYQLYIVEDYVHQTKTEAAGTIATMSITTMVVSLTASLISGPISDKMHTRKVPVII HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH ASLLFAIGTAMPWIMPSVTGMYLYAGIAGFGYGVYSAIDQALNVDVLPNKEEAGKDLGIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHH NLATTLGQAVGPTITSTVKTATGALRLHSPSPSSWPCAPPCSCCAFRR HHHHHHHHHHCCHHHHHHHHHHCEEEEECCCCCCCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA