| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692299
Identifier: 213692299
GI number: 213692299
Start: 1584022
End: 1584663
Strand: Direct
Name: 213692299
Synonym: Blon_1422
Alternate gene names: NA
Gene position: 1584022-1584663 (Clockwise)
Preceding gene: 213692297
Following gene: 213692303
Centisome position: 55.92
GC content: 59.19
Gene sequence:
>642_bases ATGGCTAAGCGCAAACATATCGGCACTGTTGTTATTGCAATACTGGTCGCTATTCTGCTGACGGTGGGCGTTTCCGGCTG GCTATTCTGGCAGTCGGTACAACGGGTGATCGGCGAGGCGCAGCAGGCGGGCGAATATGCGGCTGAAGCACAGCAATCCG TCGGGCAGGGCGACTTCAAGCAGGCGCTTGAGCAGATGGACAGCGCTGGCAGTCACATCGTCGCGGCGCGAGACGAAACC CAGGGCATGCTATGGCAGGCCGCCGAATACGTGCTGTATTACGGTTCGGACGTGAAGGCGGTGCGCGGCATGCTGGATGC GGCCGCCGACGCCGCGACCAACGCCCTGCCTAAAATCGACAGTGCCGCGCAGGGCACGCTGGTGGACTTCAATATCGAAG AGCTGCTGTCCGGCATGAACTTCTCCGACGGCACGCTTTCCATTCCCAAAATCGCTTCCATCAAGCAGGACCTGTCCGAC GCCGGTGCGGTCTTGAAGCGCGTCAAGACGTCGATTTATGCGCTGCCGCAACCCCGCACGGAACAGATCACCGAAATGGT CAACCAGGGCAAGCAGGTAGTGGACCAAATCGATGAGACTTTCGACACCTTGAACACCATCGTCGAAAAGATTCCGGGCT GA
Upstream 100 bases:
>100_bases CTACGCATCGCCAATAACATACCGATGAGCCAGAATGAGGCCCAGGCCACGATGCTAATCCGTAAATAATACTGGTCAGA GTGGCAGGTACATTGGTCCT
Downstream 100 bases:
>100_bases CGTCGGTTTGTTCTTGTCAGGCGTACCATTCGGGTCGTCGCAGTTCCAGGAATGGCCGCTGTTTGCGCGCTGCTGCGGTC TGTGTGAGATCGATGTCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MAKRKHIGTVVIAILVAILLTVGVSGWLFWQSVQRVIGEAQQAGEYAAEAQQSVGQGDFKQALEQMDSAGSHIVAARDET QGMLWQAAEYVLYYGSDVKAVRGMLDAAADAATNALPKIDSAAQGTLVDFNIEELLSGMNFSDGTLSIPKIASIKQDLSD AGAVLKRVKTSIYALPQPRTEQITEMVNQGKQVVDQIDETFDTLNTIVEKIPG
Sequences:
>Translated_213_residues MAKRKHIGTVVIAILVAILLTVGVSGWLFWQSVQRVIGEAQQAGEYAAEAQQSVGQGDFKQALEQMDSAGSHIVAARDET QGMLWQAAEYVLYYGSDVKAVRGMLDAAADAATNALPKIDSAAQGTLVDFNIEELLSGMNFSDGTLSIPKIASIKQDLSD AGAVLKRVKTSIYALPQPRTEQITEMVNQGKQVVDQIDETFDTLNTIVEKIPG >Mature_212_residues AKRKHIGTVVIAILVAILLTVGVSGWLFWQSVQRVIGEAQQAGEYAAEAQQSVGQGDFKQALEQMDSAGSHIVAARDETQ GMLWQAAEYVLYYGSDVKAVRGMLDAAADAATNALPKIDSAAQGTLVDFNIEELLSGMNFSDGTLSIPKIASIKQDLSDA GAVLKRVKTSIYALPQPRTEQITEMVNQGKQVVDQIDETFDTLNTIVEKIPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22912; Mature: 22781
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKRKHIGTVVIAILVAILLTVGVSGWLFWQSVQRVIGEAQQAGEYAAEAQQSVGQGDFK CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH QALEQMDSAGSHIVAARDETQGMLWQAAEYVLYYGSDVKAVRGMLDAAADAATNALPKID HHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCC SAAQGTLVDFNIEELLSGMNFSDGTLSIPKIASIKQDLSDAGAVLKRVKTSIYALPQPRT CCCCCCEEECCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH EQITEMVNQGKQVVDQIDETFDTLNTIVEKIPG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AKRKHIGTVVIAILVAILLTVGVSGWLFWQSVQRVIGEAQQAGEYAAEAQQSVGQGDFK CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH QALEQMDSAGSHIVAARDETQGMLWQAAEYVLYYGSDVKAVRGMLDAAADAATNALPKID HHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCC SAAQGTLVDFNIEELLSGMNFSDGTLSIPKIASIKQDLSDAGAVLKRVKTSIYALPQPRT CCCCCCEEECCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH EQITEMVNQGKQVVDQIDETFDTLNTIVEKIPG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA