| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692298
Identifier: 213692298
GI number: 213692298
Start: 1583187
End: 1583600
Strand: Reverse
Name: 213692298
Synonym: Blon_1421
Alternate gene names: NA
Gene position: 1583600-1583187 (Counterclockwise)
Preceding gene: 213692300
Following gene: 213692295
Centisome position: 55.9
GC content: 63.77
Gene sequence:
>414_bases ATGAACGAGAACGACAACACGGCGAACGCCGTCAACGGTTCCGGCGCGTTCGATGTGGAGGGCAATCCGCTGGATACGGG CCGGTTGTGGCCCATTGATCAGGCGGCATTGATCAGCGGCGTGACGACGCGCACGTTGCGCTACTGCGACGAGACCGGTC TGGTCAAGACCGCCCGCACCCGGGCGGCACAGAATCAAACCGCGACCGTGATGAACGCCATGCCGCTGTCCGGCTCGTTC GGGGCCATTCGCTCCGCGCTGGTCGGCGATCCGCGTTTCGCCGACCCGTGTGGTGAGGCGCTCTACGGCAGCAAGGCATG CGCCGACTTCGTCAACGAAGCCAAGAACATCCACGCACGGCAAATCGCCGAACGGTTCGCGGCGGAACAGGATGTACGGA ATCAGCCGAAATGA
Upstream 100 bases:
>100_bases CGCTTGCGGTTGACGTTGCGTAAACGTCTATCCTGACGGCAACGCCGCGAAACACGCACGGCGGGTAGAGGATAATCGGC TTCAAGGGGGATGATCGATC
Downstream 100 bases:
>100_bases CAGGGCGTCCGGCTCCGATTGCGCGACGAACCCTGCGACCACGTCACCGGCTTAATCATCCAAGCTGCGCGAAGCGGCGC AAAAGATGATGAGTCGGCAT
Product: transcriptional regulator, MerR family
Products: NA
Alternate protein names: Transcriptional Regulator
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues MNENDNTANAVNGSGAFDVEGNPLDTGRLWPIDQAALISGVTTRTLRYCDETGLVKTARTRAAQNQTATVMNAMPLSGSF GAIRSALVGDPRFADPCGEALYGSKACADFVNEAKNIHARQIAERFAAEQDVRNQPK
Sequences:
>Translated_137_residues MNENDNTANAVNGSGAFDVEGNPLDTGRLWPIDQAALISGVTTRTLRYCDETGLVKTARTRAAQNQTATVMNAMPLSGSF GAIRSALVGDPRFADPCGEALYGSKACADFVNEAKNIHARQIAERFAAEQDVRNQPK >Mature_137_residues MNENDNTANAVNGSGAFDVEGNPLDTGRLWPIDQAALISGVTTRTLRYCDETGLVKTARTRAAQNQTATVMNAMPLSGSF GAIRSALVGDPRFADPCGEALYGSKACADFVNEAKNIHARQIAERFAAEQDVRNQPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14645; Mature: 14645
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNENDNTANAVNGSGAFDVEGNPLDTGRLWPIDQAALISGVTTRTLRYCDETGLVKTART CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH RAAQNQTATVMNAMPLSGSFGAIRSALVGDPRFADPCGEALYGSKACADFVNEAKNIHAR HHHCCCHHHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHCCHHH QIAERFAAEQDVRNQPK HHHHHHHHHHHHCCCCC >Mature Secondary Structure MNENDNTANAVNGSGAFDVEGNPLDTGRLWPIDQAALISGVTTRTLRYCDETGLVKTART CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH RAAQNQTATVMNAMPLSGSFGAIRSALVGDPRFADPCGEALYGSKACADFVNEAKNIHAR HHHCCCHHHHHHCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHCCHHH QIAERFAAEQDVRNQPK HHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA