| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692295
Identifier: 213692295
GI number: 213692295
Start: 1581532
End: 1582065
Strand: Reverse
Name: 213692295
Synonym: Blon_1418
Alternate gene names: NA
Gene position: 1582065-1581532 (Counterclockwise)
Preceding gene: 213692298
Following gene: 213692294
Centisome position: 55.85
GC content: 63.11
Gene sequence:
>534_bases ATGGTTGCGGACGATGAGGTGCGGGCCTCCCATGGTGGGCGTCGGAATCAAGGTCTGCTGTGGTTTTTCGGCGCTTCCGC CACATTGGGCGTGGCCGCCGTCACGGCCATCACGTGCGCCGTCATCCGGTACGGCTGGAATGACGGGGAGTTCTGGAAGC TGGTGGTGCCGGCGGCCGTGGCGTTGGTGGCGGCCATCGTGTGGGCGGCGCTCGGCTTCATGCGTCGCGCCGGGCGGACG CCTGACGTTCCGGCCGACGCGAACGATACCAGCCCGGCCGAATCCAGGTTCGATTCGGCGGCCGCCCAGATTCTGGCGAT CGTCGCCATCAACGTGTGGGGCGTCATGTTCATCGTCTTCGATACGTTCCAGATTGACCCGTGGCGGTACGTGACATGGG TCGTGCCCGTGATGTTCCTGCTTTATCTGGCGGTCTTGGGCATCGGCAGGGCTTGTTTCCGCAAACGACAGAAGGATATT CGCTTCCCGGAGGAACCAAGTATGACGAGCAGCCGTCCATCATACTTGGCATAG
Upstream 100 bases:
>100_bases TCATGCGATCGCTTGACAGCATGTTGTCTGATTGACTCTTTGAGTGCCATAATTGAGATGGCATGCGTACGCGTCGGACT TTATGGAATGCGGGGACGAT
Downstream 100 bases:
>100_bases GCGGGCAGTTGGACGATGCCGGGCAGGTCCTCGTTGTCGCTGGTCTGGTTGAGGGCATATTGGGTGCCGGTCATGGAACG CTACTGGAATCTGTCACCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MVADDEVRASHGGRRNQGLLWFFGASATLGVAAVTAITCAVIRYGWNDGEFWKLVVPAAVALVAAIVWAALGFMRRAGRT PDVPADANDTSPAESRFDSAAAQILAIVAINVWGVMFIVFDTFQIDPWRYVTWVVPVMFLLYLAVLGIGRACFRKRQKDI RFPEEPSMTSSRPSYLA
Sequences:
>Translated_177_residues MVADDEVRASHGGRRNQGLLWFFGASATLGVAAVTAITCAVIRYGWNDGEFWKLVVPAAVALVAAIVWAALGFMRRAGRT PDVPADANDTSPAESRFDSAAAQILAIVAINVWGVMFIVFDTFQIDPWRYVTWVVPVMFLLYLAVLGIGRACFRKRQKDI RFPEEPSMTSSRPSYLA >Mature_177_residues MVADDEVRASHGGRRNQGLLWFFGASATLGVAAVTAITCAVIRYGWNDGEFWKLVVPAAVALVAAIVWAALGFMRRAGRT PDVPADANDTSPAESRFDSAAAQILAIVAINVWGVMFIVFDTFQIDPWRYVTWVVPVMFLLYLAVLGIGRACFRKRQKDI RFPEEPSMTSSRPSYLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19472; Mature: 19472
Theoretical pI: Translated: 8.72; Mature: 8.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVADDEVRASHGGRRNQGLLWFFGASATLGVAAVTAITCAVIRYGWNDGEFWKLVVPAAV CCCCCCHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH ALVAAIVWAALGFMRRAGRTPDVPADANDTSPAESRFDSAAAQILAIVAINVWGVMFIVF HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DTFQIDPWRYVTWVVPVMFLLYLAVLGIGRACFRKRQKDIRFPEEPSMTSSRPSYLA HHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MVADDEVRASHGGRRNQGLLWFFGASATLGVAAVTAITCAVIRYGWNDGEFWKLVVPAAV CCCCCCHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH ALVAAIVWAALGFMRRAGRTPDVPADANDTSPAESRFDSAAAQILAIVAINVWGVMFIVF HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DTFQIDPWRYVTWVVPVMFLLYLAVLGIGRACFRKRQKDIRFPEEPSMTSSRPSYLA HHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA