Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is 213692293

Identifier: 213692293

GI number: 213692293

Start: 1579018

End: 1580442

Strand: Reverse

Name: 213692293

Synonym: Blon_1416

Alternate gene names: NA

Gene position: 1580442-1579018 (Counterclockwise)

Preceding gene: 213692294

Following gene: 213692292

Centisome position: 55.79

GC content: 64.63

Gene sequence:

>1425_bases
GTGGCTAGGTATGTGCTGCGTGTGTTCCGCGACAATGTCACGGGATGGGTACCCACGATTCTGGTGGTCGCAGTGGTGAC
CACGCTGGTGGGCATATGCATGAACCAATTCGTGTGGACCTCGTCTCCGTCGTTCACATTGGCCGCGCGGCAGGCGGGTC
TTGATCCGGCCGAGTTCGGCATGGTGTCGGTCACGATCTATGTGGTGGTGTCATTTCTCGCGTTCTTCTCGTTGACGGTG
GTCGGCTCGGCCACGGTCAACCGTATTCACAGCACGTTCGCGCAATGGCGGCTTATGGGCGCCAGCCCGAGTCAGGTGCT
TGCCAGCATGTGGATGCTCGTGGGTGTGGCGAGCCTGTTCGGTTCCCTGATCGGCTCTCTGGCTGCAGTGCCGGCCAGCC
TGCTGGCGGTTCCCGAGTTCAACGCCATGGCTGCGGAAAGCTTCGCCGATGGATTCGGCTCGTTCGCACCTCCTGCGTTC
ACGCCGTCGATGGCCGCGTGGCTCGGATCCCTGCTGTTGGGTGTGGCCACGTGCATGTTGGGCGCGTCCATCCCCTCGCT
GCGCGCAGCGAAGATCCGTCCCATCGAGGTGATTCGCGGCACGGGAGCCATCGGGATACGGCACGGTTGGCGGTCTTGGG
CGCACTGGGCACTTGGTTTGATTGTCATGGCGGCGGCGCTGGCATTGGCGTTCTCCGGCATGGGCACGCCACGGGCGCTC
GCGTTCGGCCAGGAGGCGGGGCAGACATTCAACAGCGCGCTGTGGGCCGGCATCATCGCCTCGTTCGGCATGTACATCCT
TGTCAGCATGCTGATTCCGATTCTGTTGGGCATCGGACGTGTCGTGTGTCGCCTGTGCGGGTCCGCGACCGGCGTGCTCG
CCGCCCGTTCCGCCGAGGCGAAGGCCGCCAGCAACACGAACACGATTGCCCCGCTCGCCCTTGCCATGGGACTGTCGGTC
ACCCTGCTGACCTGCGCGCGATCCTATGGCCGGATACTCGCCTTGGGCGGCCATCCGAAGAGCCTGAACTACGCGGACTC
GCTGCTGCTCATAACGATGCTGTGCATCGTGTCCCTGGCCACCAGCATGGCGGTCATCGCCCTGTCGAACCGCAGCATGG
TCGCCGACCAGGCATTGCTGCGCAGCATCGGCCTGTCCCCACGTCGTGTGATCCGCATGTATCTCTGGCAGAGCCTGCAG
CTGGCCGCCGGCGCGGTCATTCTCTCGCTCATCCCGGTCGCCGTCAGCGCAAGCGTTTTCGCCGCAAGATCCGCGGCGCT
CGTCGGCATCCCCGTGGCCGAAATCCCATGGCCGGGCGTAATCGGCATGGGCACGGCCTGCTGGCTGGCATTGTTCCTCA
TCCAGTTCACGCAGATTCGCCCCGCGCTACACCGCAGCGTGGCCGACACGATACGCACATGCTGA

Upstream 100 bases:

>100_bases
GTCGGCCCGATGATGGTGAACGCCCAGCCTATCCAATCCGTCCAACCGGGCCGACCGGTCCAGCGCGTGGCGTATCCGCA
GCAGCGGAAGGAGGCTCATC

Downstream 100 bases:

>100_bases
CATGCACGCAACATCATACAAAAAGAGCCACAATGGGAGCCATGAAACCGCAATCCGCGCAGGCCAATAAGGTCACGGTC
CTGGCCGTGCCACTGGTCAT

Product: hypothetical protein

Products: NA

Alternate protein names: Lipoprotein Release ABC Transporter Permease

Number of amino acids: Translated: 474; Mature: 473

Protein sequence:

>474_residues
MARYVLRVFRDNVTGWVPTILVVAVVTTLVGICMNQFVWTSSPSFTLAARQAGLDPAEFGMVSVTIYVVVSFLAFFSLTV
VGSATVNRIHSTFAQWRLMGASPSQVLASMWMLVGVASLFGSLIGSLAAVPASLLAVPEFNAMAAESFADGFGSFAPPAF
TPSMAAWLGSLLLGVATCMLGASIPSLRAAKIRPIEVIRGTGAIGIRHGWRSWAHWALGLIVMAAALALAFSGMGTPRAL
AFGQEAGQTFNSALWAGIIASFGMYILVSMLIPILLGIGRVVCRLCGSATGVLAARSAEAKAASNTNTIAPLALAMGLSV
TLLTCARSYGRILALGGHPKSLNYADSLLLITMLCIVSLATSMAVIALSNRSMVADQALLRSIGLSPRRVIRMYLWQSLQ
LAAGAVILSLIPVAVSASVFAARSAALVGIPVAEIPWPGVIGMGTACWLALFLIQFTQIRPALHRSVADTIRTC

Sequences:

>Translated_474_residues
MARYVLRVFRDNVTGWVPTILVVAVVTTLVGICMNQFVWTSSPSFTLAARQAGLDPAEFGMVSVTIYVVVSFLAFFSLTV
VGSATVNRIHSTFAQWRLMGASPSQVLASMWMLVGVASLFGSLIGSLAAVPASLLAVPEFNAMAAESFADGFGSFAPPAF
TPSMAAWLGSLLLGVATCMLGASIPSLRAAKIRPIEVIRGTGAIGIRHGWRSWAHWALGLIVMAAALALAFSGMGTPRAL
AFGQEAGQTFNSALWAGIIASFGMYILVSMLIPILLGIGRVVCRLCGSATGVLAARSAEAKAASNTNTIAPLALAMGLSV
TLLTCARSYGRILALGGHPKSLNYADSLLLITMLCIVSLATSMAVIALSNRSMVADQALLRSIGLSPRRVIRMYLWQSLQ
LAAGAVILSLIPVAVSASVFAARSAALVGIPVAEIPWPGVIGMGTACWLALFLIQFTQIRPALHRSVADTIRTC
>Mature_473_residues
ARYVLRVFRDNVTGWVPTILVVAVVTTLVGICMNQFVWTSSPSFTLAARQAGLDPAEFGMVSVTIYVVVSFLAFFSLTVV
GSATVNRIHSTFAQWRLMGASPSQVLASMWMLVGVASLFGSLIGSLAAVPASLLAVPEFNAMAAESFADGFGSFAPPAFT
PSMAAWLGSLLLGVATCMLGASIPSLRAAKIRPIEVIRGTGAIGIRHGWRSWAHWALGLIVMAAALALAFSGMGTPRALA
FGQEAGQTFNSALWAGIIASFGMYILVSMLIPILLGIGRVVCRLCGSATGVLAARSAEAKAASNTNTIAPLALAMGLSVT
LLTCARSYGRILALGGHPKSLNYADSLLLITMLCIVSLATSMAVIALSNRSMVADQALLRSIGLSPRRVIRMYLWQSLQL
AAGAVILSLIPVAVSASVFAARSAALVGIPVAEIPWPGVIGMGTACWLALFLIQFTQIRPALHRSVADTIRTC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49661; Mature: 49529

Theoretical pI: Translated: 10.81; Mature: 10.81

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARYVLRVFRDNVTGWVPTILVVAVVTTLVGICMNQFVWTSSPSFTLAARQAGLDPAEFG
CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEHHHHCCCCHHHHH
MVSVTIYVVVSFLAFFSLTVVGSATVNRIHSTFAQWRLMGASPSQVLASMWMLVGVASLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHH
GSLIGSLAAVPASLLAVPEFNAMAAESFADGFGSFAPPAFTPSMAAWLGSLLLGVATCML
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
GASIPSLRAAKIRPIEVIRGTGAIGIRHGWRSWAHWALGLIVMAAALALAFSGMGTPRAL
HCCCCCCCCCCCCHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
AFGQEAGQTFNSALWAGIIASFGMYILVSMLIPILLGIGRVVCRLCGSATGVLAARSAEA
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHH
KAASNTNTIAPLALAMGLSVTLLTCARSYGRILALGGHPKSLNYADSLLLITMLCIVSLA
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHHHH
TSMAVIALSNRSMVADQALLRSIGLSPRRVIRMYLWQSLQLAAGAVILSLIPVAVSASVF
HHHHHHEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AARSAALVGIPVAEIPWPGVIGMGTACWLALFLIQFTQIRPALHRSVADTIRTC
HHHHHHHEECCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ARYVLRVFRDNVTGWVPTILVVAVVTTLVGICMNQFVWTSSPSFTLAARQAGLDPAEFG
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEHHHHCCCCHHHHH
MVSVTIYVVVSFLAFFSLTVVGSATVNRIHSTFAQWRLMGASPSQVLASMWMLVGVASLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHH
GSLIGSLAAVPASLLAVPEFNAMAAESFADGFGSFAPPAFTPSMAAWLGSLLLGVATCML
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
GASIPSLRAAKIRPIEVIRGTGAIGIRHGWRSWAHWALGLIVMAAALALAFSGMGTPRAL
HCCCCCCCCCCCCHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
AFGQEAGQTFNSALWAGIIASFGMYILVSMLIPILLGIGRVVCRLCGSATGVLAARSAEA
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHH
KAASNTNTIAPLALAMGLSVTLLTCARSYGRILALGGHPKSLNYADSLLLITMLCIVSLA
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHHHH
TSMAVIALSNRSMVADQALLRSIGLSPRRVIRMYLWQSLQLAAGAVILSLIPVAVSASVF
HHHHHHEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AARSAALVGIPVAEIPWPGVIGMGTACWLALFLIQFTQIRPALHRSVADTIRTC
HHHHHHHEECCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA