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The map label for this gene is rhtA [H]

Identifier: 213692286

GI number: 213692286

Start: 1570674

End: 1571492

Strand: Reverse

Name: rhtA [H]

Synonym: Blon_1408

Alternate gene names: 213692286

Gene position: 1571492-1570674 (Counterclockwise)

Preceding gene: 213692287

Following gene: 213692285

Centisome position: 55.48

GC content: 66.3

Gene sequence:

>819_bases
ATGGTGATGGTGGGGTCGTTGGGTATCCAGACGTCGTCGTCCCTGTCGGCGTCGTTGTTCGGCGCGTTGGGACCAATTCC
GGTCAGTTCGATGCGCATGCTGGTCGCCGCGATCGTCATTCTCGCACTCACCCGCCCGAAACTGGCTGGCCGGTCGAAAG
GCGAATGGCTGGGCATCGTAATCTACGGGCTTGCGATGGCGGCGATGAACGTCTGCCTGTACTCGGCCATCGACCGCATT
CCGATGGGCGTGGCCGTCACCCTGGAATTCCTCGGACCCTGCGTGGTCGCCCTGGCCGGTTCGCATCACTGGCGCGAGGG
CCTGTGCGCGGTGGTCGCGCTGGTGGGTGTGGGCTTGATCTCGTTTACGCCGGGCGGCTACTTCAATCCGGCCGGCTACC
TGTTCGCGCTGGGCTCGGCCGTGTGCTTCGGCCTGTACACGCTCTTCGCCGACCGGGTCGGCAAGGCAGGCACCGGGCTC
GACGGGCTCGCCCTGTCGGTCACGGTTGCGGCGCTGGCCACTTCGCCGGTATCCATCACTCGCGCGCCGCATGTGTCGGC
CGCCCAGTGGGGCGTCATCGCAGCCTCGGCGGTGCTGGGAGTTGCGATTCCCTACACGATGGACACGTTGTCCGGGCGTA
TCACGTCGGCGCGCGTGGTCGGCACGCTGTTCTCCATCGACCCCGCCATGAGCGTGATTATCGCCGCGCTGATATTGCGA
CAGACCATCACCGCGGTGGCCGTGATCGGCGTCATCGTCGTCTCCCTCGCGGGTGCCCTGCTGGTGTGGTCATCCGGCGG
CGATGCCGTAAACGGATGA

Upstream 100 bases:

>100_bases
GGCGCAGAGGTCGTGTGGGAATGGCCGTGACAGGGGAGGGGTATTGGGCAAGCTTCGGGCGCCGCGTTCGGCGCGTGGCC
GTGTGATGGCGGCGGCCGGC

Downstream 100 bases:

>100_bases
TTCTTGTCATACGATTGCTTGACAGCATGTTGTGAATGCTTGAGCCCCGCTCATACCATTCAAATATAATGGTTTTTCGC
ATGATTCGTTAGCGTTGACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MVMVGSLGIQTSSSLSASLFGALGPIPVSSMRMLVAAIVILALTRPKLAGRSKGEWLGIVIYGLAMAAMNVCLYSAIDRI
PMGVAVTLEFLGPCVVALAGSHHWREGLCAVVALVGVGLISFTPGGYFNPAGYLFALGSAVCFGLYTLFADRVGKAGTGL
DGLALSVTVAALATSPVSITRAPHVSAAQWGVIAASAVLGVAIPYTMDTLSGRITSARVVGTLFSIDPAMSVIIAALILR
QTITAVAVIGVIVVSLAGALLVWSSGGDAVNG

Sequences:

>Translated_272_residues
MVMVGSLGIQTSSSLSASLFGALGPIPVSSMRMLVAAIVILALTRPKLAGRSKGEWLGIVIYGLAMAAMNVCLYSAIDRI
PMGVAVTLEFLGPCVVALAGSHHWREGLCAVVALVGVGLISFTPGGYFNPAGYLFALGSAVCFGLYTLFADRVGKAGTGL
DGLALSVTVAALATSPVSITRAPHVSAAQWGVIAASAVLGVAIPYTMDTLSGRITSARVVGTLFSIDPAMSVIIAALILR
QTITAVAVIGVIVVSLAGALLVWSSGGDAVNG
>Mature_272_residues
MVMVGSLGIQTSSSLSASLFGALGPIPVSSMRMLVAAIVILALTRPKLAGRSKGEWLGIVIYGLAMAAMNVCLYSAIDRI
PMGVAVTLEFLGPCVVALAGSHHWREGLCAVVALVGVGLISFTPGGYFNPAGYLFALGSAVCFGLYTLFADRVGKAGTGL
DGLALSVTVAALATSPVSITRAPHVSAAQWGVIAASAVLGVAIPYTMDTLSGRITSARVVGTLFSIDPAMSVIIAALILR
QTITAVAVIGVIVVSLAGALLVWSSGGDAVNG

Specific function: Unknown

COG id: COG5006

COG function: function code R; Predicted permease, DMT superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Escherichia coli, GI1787033, Length=258, Percent_Identity=29.0697674418605, Blast_Score=102, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 27474; Mature: 27474

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHEEECCCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]