Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is 213692287

Identifier: 213692287

GI number: 213692287

Start: 1571753

End: 1572376

Strand: Reverse

Name: 213692287

Synonym: Blon_1409

Alternate gene names: NA

Gene position: 1572376-1571753 (Counterclockwise)

Preceding gene: 213692288

Following gene: 213692286

Centisome position: 55.51

GC content: 60.1

Gene sequence:

>624_bases
ATGAAGTCCCTATTGCGTATTGAGCGTGTGGCGGTGATCCGCTGGCCGACGCTCGCCTTCGTGGCTGTGCTGCTGTTTCC
GTTGTTCTTTTTGCGTTACGGGAACACGGGTGCGGTGGTGCAGTCGGCGATGGTGATGGCGCTTCCCGTAACCGCTGCCG
GTCTCGTCTTCTCCCATGCGAGGGTGCCCTCCTCGTACCGTTCCTTCAGCATCCACGACCGGCTCCTGCTTCGCTTCAGC
GTGAAGTCGCTGTCGCTCGGCGTCGTGATCAACGTCTGCCTGACTTTGCTGTACGGGCTTGCCGTCGGGCTCGTCGTCAA
CGAAACGCTTTCGTCGCGTACCATTCTGATGCTTGCGTTCACCGCCGTCGTTCTTTCCCTGGCATGCTTCGTTCTGCGGC
TCTGGGTCAGTCCTCTCGTCGCCTGGAACGTCGTCGCCTTCTTCATCGTCGCCGGACTTACGGTGAGTTCCGGCATGTTC
GAGGACGCGCCGATGCTGTACGCCGTCATACCAACCACATGGGTGTTGAACGGGGTGAAATTCGCCGGTTACGTGATTCC
GGTCGGCGTCGCCATCGCCGCGATAAGCGCATGTCTGCTGTTCAAGGCGGTGAAACGTGTCTGA

Upstream 100 bases:

>100_bases
GAGCGTCCGTCGGCCCCGTGATGGTCGTCGTCCCGATCGTGGTGCTTTTGGTTGCCTATGTGCTGTTGAGCCGGTTCCGT
CGCGAAGGAGTGGAGAGGAA

Downstream 100 bases:

>100_bases
CCGAAGCCGTATACGGGTGCACTGTTTCGGATCGTAATCGTCCGGCAGCCAGCTTTCTCACCGTATTCCGTTGCGGGAGT
GAGCCTGCCGCTTTCCGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MKSLLRIERVAVIRWPTLAFVAVLLFPLFFLRYGNTGAVVQSAMVMALPVTAAGLVFSHARVPSSYRSFSIHDRLLLRFS
VKSLSLGVVINVCLTLLYGLAVGLVVNETLSSRTILMLAFTAVVLSLACFVLRLWVSPLVAWNVVAFFIVAGLTVSSGMF
EDAPMLYAVIPTTWVLNGVKFAGYVIPVGVAIAAISACLLFKAVKRV

Sequences:

>Translated_207_residues
MKSLLRIERVAVIRWPTLAFVAVLLFPLFFLRYGNTGAVVQSAMVMALPVTAAGLVFSHARVPSSYRSFSIHDRLLLRFS
VKSLSLGVVINVCLTLLYGLAVGLVVNETLSSRTILMLAFTAVVLSLACFVLRLWVSPLVAWNVVAFFIVAGLTVSSGMF
EDAPMLYAVIPTTWVLNGVKFAGYVIPVGVAIAAISACLLFKAVKRV
>Mature_207_residues
MKSLLRIERVAVIRWPTLAFVAVLLFPLFFLRYGNTGAVVQSAMVMALPVTAAGLVFSHARVPSSYRSFSIHDRLLLRFS
VKSLSLGVVINVCLTLLYGLAVGLVVNETLSSRTILMLAFTAVVLSLACFVLRLWVSPLVAWNVVAFFIVAGLTVSSGMF
EDAPMLYAVIPTTWVLNGVKFAGYVIPVGVAIAAISACLLFKAVKRV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22410; Mature: 22410

Theoretical pI: Translated: 10.83; Mature: 10.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLLRIERVAVIRWPTLAFVAVLLFPLFFLRYGNTGAVVQSAMVMALPVTAAGLVFSHA
CCHHHHHHHHHHEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RVPSSYRSFSIHDRLLLRFSVKSLSLGVVINVCLTLLYGLAVGLVVNETLSSRTILMLAF
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAVVLSLACFVLRLWVSPLVAWNVVAFFIVAGLTVSSGMFEDAPMLYAVIPTTWVLNGVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEHHHHHHHHCCHH
FAGYVIPVGVAIAAISACLLFKAVKRV
HHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKSLLRIERVAVIRWPTLAFVAVLLFPLFFLRYGNTGAVVQSAMVMALPVTAAGLVFSHA
CCHHHHHHHHHHEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RVPSSYRSFSIHDRLLLRFSVKSLSLGVVINVCLTLLYGLAVGLVVNETLSSRTILMLAF
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAVVLSLACFVLRLWVSPLVAWNVVAFFIVAGLTVSSGMFEDAPMLYAVIPTTWVLNGVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEHHHHHHHHCCHH
FAGYVIPVGVAIAAISACLLFKAVKRV
HHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA