| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692265
Identifier: 213692265
GI number: 213692265
Start: 1552705
End: 1553949
Strand: Direct
Name: 213692265
Synonym: Blon_1386
Alternate gene names: NA
Gene position: 1552705-1553949 (Clockwise)
Preceding gene: 213692264
Following gene: 213692266
Centisome position: 54.81
GC content: 56.79
Gene sequence:
>1245_bases ATGGAAAATTTATCAAGGAGGGGGAATAACTGGGTTTATCTGCTTTCCGTTGTAAGCGATAATCTCGGCAGTTCGTTGAT GACTTTCGTGTTGCCGCTTATCGTGCTCGACCTTACCGGTTCCGGTATTCATCTTTCGATCATCTCTTCGTTCGAGACGC TGCCGTTCTTGCTGCTGGGTCTGCCTTTCGGCGCTATTGTGGACAGGTGCGACGTCAGGAAGGTGCTCATCCGTTCCGAT GCCATCAGATTCGGAGGATACGCGTTGCTCGCGGCGGTTCTTTCGGCTCGGAGCAACGCGACCATGACGCTGATAGCCAT CTATCTCGTCACCTTGGTCATAGGGTGCACCAATGTGTTCAGCTCCGTTTCCGAGATGACGTTCATCTCGTATTTCGTGT CGAAATCGGATTATTCGAAGATGAACAGCATCGTGTACGGCATCCAGTACACGGCCGGGCTGCTCATCCCGCTTGCCGGC GGGGCGCTCTACTCCGTGGTGCCGATGGGGCTGCTGGCCCTGATCTGCGCCGCGTGTTTTCTTCTCAGTGCGGGTGCCAT TCTCCTGATGAGGGTCGGTTCCTCGAAGGGCGCCGGCGGGTTGAGGGGCCCCGTGCCGGCCGCGGTGCGAACGGTCATCG GCGACACCCGGCAGGGGCTTTCCTATCTGAAGACCAGGCGTGTGGTTCTCTACCCGCTTGTGCTGGCCGCGTTGTTCAAC GTGCTGACCGGGAATTTCCAGAACGACAGCCTCGTCATCATGCGCAAGAGTCTGAGCTTCACGTCGGGCCAGGTCGGCTT GGTCATGTCGGTTACGGCCATGGGCGCGTTGGCGGGGACCTTCATCGTCAACCTGCTGAACAGAAGCTTCAAGTTCGAAA CGGTCCTGATCGCGAACTTCCTCGTCCAGATGTGCTTCCGTCTCCTGTTTGTGGCGTTCGGCAACATCTTCGCGGTGGCG GCGACGCTGTTCGTGGTGGACCTGTGCCAGTCCGTGCTGAACATCATCATTATCACGAACCGGCAGAATCTGGTCGAAAC CCGTTACCTCGGGAGGGTGACGAGCATATACAAGGCGGTTCTGATCGGGGTCAATTCGCTCGGTTTCATATACGGAGGCA CCCTGTCGAACACCTTCGGCCAGAGGAACGCCGTCCTATGGTCAGGCGTCGAAATCCTGATACTGACCATGATTGGTATC GGAGCCTACGCTCATCTCAACAAAGAAAGAACCACCGATGAGTAA
Upstream 100 bases:
>100_bases AATTCGGAGAGTGTGGTGAGAACATCAGAATGCACACGGACAGTCTGTCTCCCGATGTACACTCTTATAAGGTTTGGTAG GGATGGGGTCGCGTATTCAC
Downstream 100 bases:
>100_bases TGTCAAAATCAAAGAAATTCCTGAAGATTTCATAGTACATGAAATCTCAATTCCGACTTCCGACGGAGTATACACTCATT CAAGATATCGTCTAGCAAAA
Product: major facilitator superfamily MFS_1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 414; Mature: 414
Protein sequence:
>414_residues MENLSRRGNNWVYLLSVVSDNLGSSLMTFVLPLIVLDLTGSGIHLSIISSFETLPFLLLGLPFGAIVDRCDVRKVLIRSD AIRFGGYALLAAVLSARSNATMTLIAIYLVTLVIGCTNVFSSVSEMTFISYFVSKSDYSKMNSIVYGIQYTAGLLIPLAG GALYSVVPMGLLALICAACFLLSAGAILLMRVGSSKGAGGLRGPVPAAVRTVIGDTRQGLSYLKTRRVVLYPLVLAALFN VLTGNFQNDSLVIMRKSLSFTSGQVGLVMSVTAMGALAGTFIVNLLNRSFKFETVLIANFLVQMCFRLLFVAFGNIFAVA ATLFVVDLCQSVLNIIIITNRQNLVETRYLGRVTSIYKAVLIGVNSLGFIYGGTLSNTFGQRNAVLWSGVEILILTMIGI GAYAHLNKERTTDE
Sequences:
>Translated_414_residues MENLSRRGNNWVYLLSVVSDNLGSSLMTFVLPLIVLDLTGSGIHLSIISSFETLPFLLLGLPFGAIVDRCDVRKVLIRSD AIRFGGYALLAAVLSARSNATMTLIAIYLVTLVIGCTNVFSSVSEMTFISYFVSKSDYSKMNSIVYGIQYTAGLLIPLAG GALYSVVPMGLLALICAACFLLSAGAILLMRVGSSKGAGGLRGPVPAAVRTVIGDTRQGLSYLKTRRVVLYPLVLAALFN VLTGNFQNDSLVIMRKSLSFTSGQVGLVMSVTAMGALAGTFIVNLLNRSFKFETVLIANFLVQMCFRLLFVAFGNIFAVA ATLFVVDLCQSVLNIIIITNRQNLVETRYLGRVTSIYKAVLIGVNSLGFIYGGTLSNTFGQRNAVLWSGVEILILTMIGI GAYAHLNKERTTDE >Mature_414_residues MENLSRRGNNWVYLLSVVSDNLGSSLMTFVLPLIVLDLTGSGIHLSIISSFETLPFLLLGLPFGAIVDRCDVRKVLIRSD AIRFGGYALLAAVLSARSNATMTLIAIYLVTLVIGCTNVFSSVSEMTFISYFVSKSDYSKMNSIVYGIQYTAGLLIPLAG GALYSVVPMGLLALICAACFLLSAGAILLMRVGSSKGAGGLRGPVPAAVRTVIGDTRQGLSYLKTRRVVLYPLVLAALFN VLTGNFQNDSLVIMRKSLSFTSGQVGLVMSVTAMGALAGTFIVNLLNRSFKFETVLIANFLVQMCFRLLFVAFGNIFAVA ATLFVVDLCQSVLNIIIITNRQNLVETRYLGRVTSIYKAVLIGVNSLGFIYGGTLSNTFGQRNAVLWSGVEILILTMIGI GAYAHLNKERTTDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44577; Mature: 44577
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENLSRRGNNWVYLLSVVSDNLGSSLMTFVLPLIVLDLTGSGIHLSIISSFETLPFLLLG CCCCCCCCCCEEEEEEEHHCCCCHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHH LPFGAIVDRCDVRKVLIRSDAIRFGGYALLAAVLSARSNATMTLIAIYLVTLVIGCTNVF CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH SSVSEMTFISYFVSKSDYSKMNSIVYGIQYTAGLLIPLAGGALYSVVPMGLLALICAACF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHH LLSAGAILLMRVGSSKGAGGLRGPVPAAVRTVIGDTRQGLSYLKTRRVVLYPLVLAALFN HHHCCHHEEEEECCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH VLTGNFQNDSLVIMRKSLSFTSGQVGLVMSVTAMGALAGTFIVNLLNRSFKFETVLIANF HHCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH LVQMCFRLLFVAFGNIFAVAATLFVVDLCQSVLNIIIITNRQNLVETRYLGRVTSIYKAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHH LIGVNSLGFIYGGTLSNTFGQRNAVLWSGVEILILTMIGIGAYAHLNKERTTDE HHHCCHHHHEECCCHHCCCCCCCCCHHCCHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MENLSRRGNNWVYLLSVVSDNLGSSLMTFVLPLIVLDLTGSGIHLSIISSFETLPFLLLG CCCCCCCCCCEEEEEEEHHCCCCHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHH LPFGAIVDRCDVRKVLIRSDAIRFGGYALLAAVLSARSNATMTLIAIYLVTLVIGCTNVF CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH SSVSEMTFISYFVSKSDYSKMNSIVYGIQYTAGLLIPLAGGALYSVVPMGLLALICAACF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHH LLSAGAILLMRVGSSKGAGGLRGPVPAAVRTVIGDTRQGLSYLKTRRVVLYPLVLAALFN HHHCCHHEEEEECCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH VLTGNFQNDSLVIMRKSLSFTSGQVGLVMSVTAMGALAGTFIVNLLNRSFKFETVLIANF HHCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH LVQMCFRLLFVAFGNIFAVAATLFVVDLCQSVLNIIIITNRQNLVETRYLGRVTSIYKAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHH LIGVNSLGFIYGGTLSNTFGQRNAVLWSGVEILILTMIGIGAYAHLNKERTTDE HHHCCHHHHEECCCHHCCCCCCCCCHHCCHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA