| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692256
Identifier: 213692256
GI number: 213692256
Start: 1545021
End: 1546034
Strand: Reverse
Name: 213692256
Synonym: Blon_1376
Alternate gene names: NA
Gene position: 1546034-1545021 (Counterclockwise)
Preceding gene: 213692260
Following gene: 213692253
Centisome position: 54.58
GC content: 60.55
Gene sequence:
>1014_bases ATGGGATTTCTTAAGAACTTTTCCGAACCGTTTGCGTTCGCGATGGCGCTGTGGCCGTTTGTGTCCATGCTGCTGACCGT GCCGGTGCTGGCGCTGCTGTATCACCGCGACAATCGCATCCTACTGTCGTCGGCCATAGTGGCGTATGGCACGGTGCTGT ACTTGCTCGGCCTGCTGTGCTTCACACTGTATCCGATGCCGGCCGATGCGGCGGCCTATTGCGCCGCGCACCATCTGACA CCGCAGCTCAACCCACTGCAGTTCATCGGTGACATCCGTACCGATGGTCTCACCGCCGTACTGCAAATCGCGTTTAATAT CGTGTTCTTCCTGCCGTTGGGCTTCATCATGGGCCGCATATGGCGTTGGCCGCTGCCGGTTACCGCAGTACTGTCGTTCG CCACGTCGCTATTTCTGGAGACGATGCAGCTGACCGGCCTCATGGGCGTGTTCCCGTGCGCTTACCGTCTGTTCGACGTG GACGATCTCCTGTGGAACACGACCGGCGCGCTGATCGGATTCGCGCTGGCCATGCTTTCGCTGCGCCTGATTCCGGCGCG GGTCGCCGATATGACGCCGACCACCACACCAGGCTTCATGAGGCGGCTGATCACGTTCATCATCGACATGACGCTGATCG CGTTCGCCGTGATGCCGACGCATCTGTTCGTCATGATCGTCCGCTCGAACCTGCCCTCGGGCTCCAATGGCTCATGGCAG TCGATGGAACCGTTCGACTGGACCGGTTCGATCCTCTTCCTGGCGGCGCTCATCCTCTTCGAGGGCGTGGTGCCATGGTT GCGCGGCGGCTGCACGTTCGGCGGCAGTTTCACGCACATGACAGTGGAAACCCGGCCGCGAGAAGGCTGGCGGCGTGCGG CGTTCTATGTGGCGCGTATGGCGACGCTAGTCATCGTGCTGCCATGGCATAGCGGCGGATTCAATCTGCTGGTGTTCATC GGCCTCGGCATCTTCTGGCTGGTCAAGCATCAGATGCCGTACGACCTCATATAA
Upstream 100 bases:
>100_bases GCCGATACCCGCATGCCGTCATGTTCCGTACCTTGGAATCAGAAGTCGAGAGTCAAGGTCCGAAACCGAACGGAGCGGGC CGAAGCAGGGAGCATTGAAG
Downstream 100 bases:
>100_bases GACCGGCGCTCCGCCGTTTGGCGTTACAGGGCAACCTCCGACCATCGTTCGGGAGTCGGAATGCTGCGCAGCGGGCCGGC CAACGATATGGCCAATCCCG
Product: VanZ family protein
Products: NA
Alternate protein names: VanZ Family Protein; Permease; Integral Membrane Protein; Carbohydrate Kinase YjeF Related Protein; Vanz Family Protein; VanZ-Like Protein; VanZ/RDD Family Protein
Number of amino acids: Translated: 337; Mature: 336
Protein sequence:
>337_residues MGFLKNFSEPFAFAMALWPFVSMLLTVPVLALLYHRDNRILLSSAIVAYGTVLYLLGLLCFTLYPMPADAAAYCAAHHLT PQLNPLQFIGDIRTDGLTAVLQIAFNIVFFLPLGFIMGRIWRWPLPVTAVLSFATSLFLETMQLTGLMGVFPCAYRLFDV DDLLWNTTGALIGFALAMLSLRLIPARVADMTPTTTPGFMRRLITFIIDMTLIAFAVMPTHLFVMIVRSNLPSGSNGSWQ SMEPFDWTGSILFLAALILFEGVVPWLRGGCTFGGSFTHMTVETRPREGWRRAAFYVARMATLVIVLPWHSGGFNLLVFI GLGIFWLVKHQMPYDLI
Sequences:
>Translated_337_residues MGFLKNFSEPFAFAMALWPFVSMLLTVPVLALLYHRDNRILLSSAIVAYGTVLYLLGLLCFTLYPMPADAAAYCAAHHLT PQLNPLQFIGDIRTDGLTAVLQIAFNIVFFLPLGFIMGRIWRWPLPVTAVLSFATSLFLETMQLTGLMGVFPCAYRLFDV DDLLWNTTGALIGFALAMLSLRLIPARVADMTPTTTPGFMRRLITFIIDMTLIAFAVMPTHLFVMIVRSNLPSGSNGSWQ SMEPFDWTGSILFLAALILFEGVVPWLRGGCTFGGSFTHMTVETRPREGWRRAAFYVARMATLVIVLPWHSGGFNLLVFI GLGIFWLVKHQMPYDLI >Mature_336_residues GFLKNFSEPFAFAMALWPFVSMLLTVPVLALLYHRDNRILLSSAIVAYGTVLYLLGLLCFTLYPMPADAAAYCAAHHLTP QLNPLQFIGDIRTDGLTAVLQIAFNIVFFLPLGFIMGRIWRWPLPVTAVLSFATSLFLETMQLTGLMGVFPCAYRLFDVD DLLWNTTGALIGFALAMLSLRLIPARVADMTPTTTPGFMRRLITFIIDMTLIAFAVMPTHLFVMIVRSNLPSGSNGSWQS MEPFDWTGSILFLAALILFEGVVPWLRGGCTFGGSFTHMTVETRPREGWRRAAFYVARMATLVIVLPWHSGGFNLLVFIG LGIFWLVKHQMPYDLI
Specific function: Unknown
COG id: COG4767
COG function: function code V; Glycopeptide antibiotics resistance protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37663; Mature: 37532
Theoretical pI: Translated: 8.33; Mature: 8.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFLKNFSEPFAFAMALWPFVSMLLTVPVLALLYHRDNRILLSSAIVAYGTVLYLLGLLC CCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH FTLYPMPADAAAYCAAHHLTPQLNPLQFIGDIRTDGLTAVLQIAFNIVFFLPLGFIMGRI HHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH WRWPLPVTAVLSFATSLFLETMQLTGLMGVFPCAYRLFDVDDLLWNTTGALIGFALAMLS HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRLIPARVADMTPTTTPGFMRRLITFIIDMTLIAFAVMPTHLFVMIVRSNLPSGSNGSWQ HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC SMEPFDWTGSILFLAALILFEGVVPWLRGGCTFGGSFTHMTVETRPREGWRRAAFYVARM CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHH ATLVIVLPWHSGGFNLLVFIGLGIFWLVKHQMPYDLI HHHEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure GFLKNFSEPFAFAMALWPFVSMLLTVPVLALLYHRDNRILLSSAIVAYGTVLYLLGLLC CCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH FTLYPMPADAAAYCAAHHLTPQLNPLQFIGDIRTDGLTAVLQIAFNIVFFLPLGFIMGRI HHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH WRWPLPVTAVLSFATSLFLETMQLTGLMGVFPCAYRLFDVDDLLWNTTGALIGFALAMLS HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRLIPARVADMTPTTTPGFMRRLITFIIDMTLIAFAVMPTHLFVMIVRSNLPSGSNGSWQ HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC SMEPFDWTGSILFLAALILFEGVVPWLRGGCTFGGSFTHMTVETRPREGWRRAAFYVARM CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHH ATLVIVLPWHSGGFNLLVFIGLGIFWLVKHQMPYDLI HHHEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA