| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
Click here to switch to the map view.
The map label for this gene is 213692229
Identifier: 213692229
GI number: 213692229
Start: 1520006
End: 1522120
Strand: Direct
Name: 213692229
Synonym: Blon_1349
Alternate gene names: NA
Gene position: 1520006-1522120 (Clockwise)
Preceding gene: 213692227
Following gene: 213692230
Centisome position: 53.66
GC content: 65.48
Gene sequence:
>2115_bases ATGACGACGACCGCAGACAGACGCGAGAAAGGCTCGGGCGGAATCACCAGACTCGCCAACGGGAAATACAGGGCCTTCGT CGAAACGACCCCCGACCCCGGCGACGGGTCGAGACGACGCGTGAGCGCCACGGGCCGGACCAAAAGCGAGGCGCTGCGCA AGGCCAGGGACAAGGCCCTGCGACCGGACATGGGCATGACCCCCGGCGGGAACGCCACCGTCGCCGAATGGATGGACCAC TGGGTGGACGAGGTCATCGAACCCCGACGCGCCCCGAACACCACGAAAAGCTACCGCACCCGCATCCGCATGGACATCAC GCCCGTCATCGGCGCCGTCCCGCTCGACCGGCTGCGCCCCAGCCACGTCCGCATGGTCGAGAACCGCATCCTGCGCGGCG ACGGACGCACCGGGACCGACCCCCGTTCGGCCGCGACCGCACGCCTGACCCACAGCATCCTCAAAACCGCCCTGGGCGAC GCCATGGCCGAAGGGCTCATCGACCGGAACCCCGCCGCCCTCACCGAAGTCCCGGAAACCGAACCCGTCGAAATCGCCAT CCTCACCACCGGACAGGCGGCACGGCTCATCGCTCTGGAACCCGACACGAAATGGCGGCTCATCTGGCGGCTCCTGTTCA TCACCGGCATGAGACTCGGCGAAACGCTCGGCATCACCCGACAGGAACTCATCCGATCGGACGGACTGCCCTGCCTGCTC GTCGAATGGCAGCTCAAGGAATTCGAGAAGGACACCGTCATCCCCGCCGGATACCGGGCCAGACACCTCGGAGGCCGCAT GTGGCTCACCCGCCCCAAGACCCGCAAAGGCCAACGGCTCATCCCCCTGCCCGCCGACCTTGCCGCCGACCTCGAATCAT ACATGGACTCGGCCGGCATCCCCGACGACCAGCCGGTCTTCCGATCCGGACGCGGCAACCCGATCTGCAAGGACACGCTG CACCACGCATGGCGCCGGGCCCTGGACCGGGCCGGTCTGCCGCACGTAATCCGAATCCATCTCCGCCGCCACGCAACGCA CGTCCTCGATCCGGCACGCCTCCAACGTGGCGCCGCTGCCGGCGAACGGCTCCAACACGAGCCCGTCCGGCGGCGTGACC AGACGCACCAGCCAGCGCATCAGTTCCAACGGTTTCACCGTCGGATGGAGGATCCCGTCCACGGTCAGCCTCTCCCCCGG TCCCGCCTTCGGACAATACCGGAACACGGGATAGAAGCGGGATGCGCCGCCGGCATCATCGTATTCCGCACCCGTATGGG TCATGCTCCAGCCGTCACCGGGTTTCGTGCTTGCGCGTGGTTTGCCTTTTCGACTGACGGTGACGCCGGACTGTCGGTCG AGTTCCTTGGCCGTGGATTGGTCGAACAGCATGTTCGGCGTGAAACGGGCTTCGGCCGTGTAGTCGGTGCGATCCGCTTT GTCCGCGCCGTAGATGTGGTTGTCGCGCGGGCCGGAGTTGAAGTCGGCATGCCGGTTCTTGTTCTTCGACTCCTTCTCAT CTGCCGTGTTGCGGAATGGGATGCGGCATGCGTCGATATGCAGTGCGCCCGTCCCGTGTCCGAGCAGATTGTGGTCGAGT GTCCCGTCCAACGGCTTGCGTGCGAGGCAGATGGGTTCGTGCGCGGGCTTCAGCTGGCTGTACCAGCCGGACCATTGTTC GCCCTGTTCGGTGGCGAGCGCATCCCATTCGGATTTCGTCTTGCCGCCGTTCGCGGTGCTGGAACCTCCGAAGCCGTTGG TGTCCGAATATCCTGCGCCAGCATGACCTTTACCGGCCACATGGGTGCGTTCCGCACCCAATTCCCTGTCCACGAGCAGT CTCGCATCCGAACCGTGTGGCATGCCGCTTGCGTACACCCAGTCGATCTGGTCGCGGATTTCGAAGCCCGCGTCCTCGAT CGCGCAGGCGAGCCGATGATATGTGCGGCTGGCGGCAAACGCGGCCACGTGCCCTCCCGGCTTCAGGACGCGCAGAATGT CCTTCCACAGGATTACGTCGAATGCGATGCCCGTCGAATCGAAGCCCAGGTTCATGAAACCGATCTCGTACGGCGGGTCG GTGACCGGTTTGGCGGCGCAAGCCCCGTCTTTTAA
Upstream 100 bases:
>100_bases TTTCGGCTGAAATAGGCACACGATTGGCACCTATCCCGGTCGGAAACGCATACCGGGGCCCGAAGGAACGGGAACACCGA AGGACCCATGGAAAGGTGAC
Downstream 100 bases:
>100_bases GGCTGGGGTGAGCCGCCACTTCTTTGATTAATCACTGTTTCCGTGGCAAGGTTTATAGCATGAGCCAGAAGGTACGAATC ATCAAAGTCAGGCATGCGGG
Product: phage integrase family protein
Products: NA
Alternate protein names: Phage Integrase; Integrase; Phage Integrase Family Protein; Phage-Related Integrase; DNA Integration/Recombination/Invertion Protein; Site-Specific Recombinase Phage Integrase Family; Integrase/Recombinase; Phage Integrase Family Site Specific Recombinase; Site-Specific Integrase; Prophage; Tyrosine Recombinase XerC-Like Protein
Number of amino acids: Translated: 704; Mature: 703
Protein sequence:
>704_residues MTTTADRREKGSGGITRLANGKYRAFVETTPDPGDGSRRRVSATGRTKSEALRKARDKALRPDMGMTPGGNATVAEWMDH WVDEVIEPRRAPNTTKSYRTRIRMDITPVIGAVPLDRLRPSHVRMVENRILRGDGRTGTDPRSAATARLTHSILKTALGD AMAEGLIDRNPAALTEVPETEPVEIAILTTGQAARLIALEPDTKWRLIWRLLFITGMRLGETLGITRQELIRSDGLPCLL VEWQLKEFEKDTVIPAGYRARHLGGRMWLTRPKTRKGQRLIPLPADLAADLESYMDSAGIPDDQPVFRSGRGNPICKDTL HHAWRRALDRAGLPHVIRIHLRRHATHVLDPARLQRGAAAGERLQHEPVRRRDQTHQPAHQFQRFHRRMEDPVHGQPLPR SRLRTIPEHGIEAGCAAGIIVFRTRMGHAPAVTGFRACAWFAFSTDGDAGLSVEFLGRGLVEQHVRRETGFGRVVGAIRF VRAVDVVVARAGVEVGMPVLVLRLLLICRVAEWDAACVDMQCARPVSEQIVVECPVQRLACEADGFVRGLQLAVPAGPLF ALFGGERIPFGFRLAAVRGAGTSEAVGVRISCASMTFTGHMGAFRTQFPVHEQSRIRTVWHAACVHPVDLVADFEARVLD RAGEPMICAAGGKRGHVPSRLQDAQNVLPQDYVECDARRIEAQVHETDLVRRVGDRFGGASPVF
Sequences:
>Translated_704_residues MTTTADRREKGSGGITRLANGKYRAFVETTPDPGDGSRRRVSATGRTKSEALRKARDKALRPDMGMTPGGNATVAEWMDH WVDEVIEPRRAPNTTKSYRTRIRMDITPVIGAVPLDRLRPSHVRMVENRILRGDGRTGTDPRSAATARLTHSILKTALGD AMAEGLIDRNPAALTEVPETEPVEIAILTTGQAARLIALEPDTKWRLIWRLLFITGMRLGETLGITRQELIRSDGLPCLL VEWQLKEFEKDTVIPAGYRARHLGGRMWLTRPKTRKGQRLIPLPADLAADLESYMDSAGIPDDQPVFRSGRGNPICKDTL HHAWRRALDRAGLPHVIRIHLRRHATHVLDPARLQRGAAAGERLQHEPVRRRDQTHQPAHQFQRFHRRMEDPVHGQPLPR SRLRTIPEHGIEAGCAAGIIVFRTRMGHAPAVTGFRACAWFAFSTDGDAGLSVEFLGRGLVEQHVRRETGFGRVVGAIRF VRAVDVVVARAGVEVGMPVLVLRLLLICRVAEWDAACVDMQCARPVSEQIVVECPVQRLACEADGFVRGLQLAVPAGPLF ALFGGERIPFGFRLAAVRGAGTSEAVGVRISCASMTFTGHMGAFRTQFPVHEQSRIRTVWHAACVHPVDLVADFEARVLD RAGEPMICAAGGKRGHVPSRLQDAQNVLPQDYVECDARRIEAQVHETDLVRRVGDRFGGASPVF >Mature_703_residues TTTADRREKGSGGITRLANGKYRAFVETTPDPGDGSRRRVSATGRTKSEALRKARDKALRPDMGMTPGGNATVAEWMDHW VDEVIEPRRAPNTTKSYRTRIRMDITPVIGAVPLDRLRPSHVRMVENRILRGDGRTGTDPRSAATARLTHSILKTALGDA MAEGLIDRNPAALTEVPETEPVEIAILTTGQAARLIALEPDTKWRLIWRLLFITGMRLGETLGITRQELIRSDGLPCLLV EWQLKEFEKDTVIPAGYRARHLGGRMWLTRPKTRKGQRLIPLPADLAADLESYMDSAGIPDDQPVFRSGRGNPICKDTLH HAWRRALDRAGLPHVIRIHLRRHATHVLDPARLQRGAAAGERLQHEPVRRRDQTHQPAHQFQRFHRRMEDPVHGQPLPRS RLRTIPEHGIEAGCAAGIIVFRTRMGHAPAVTGFRACAWFAFSTDGDAGLSVEFLGRGLVEQHVRRETGFGRVVGAIRFV RAVDVVVARAGVEVGMPVLVLRLLLICRVAEWDAACVDMQCARPVSEQIVVECPVQRLACEADGFVRGLQLAVPAGPLFA LFGGERIPFGFRLAAVRGAGTSEAVGVRISCASMTFTGHMGAFRTQFPVHEQSRIRTVWHAACVHPVDLVADFEARVLDR AGEPMICAAGGKRGHVPSRLQDAQNVLPQDYVECDARRIEAQVHETDLVRRVGDRFGGASPVF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 77857; Mature: 77725
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTADRREKGSGGITRLANGKYRAFVETTPDPGDGSRRRVSATGRTKSEALRKARDKAL CCCCCCCCCCCCCCCEEECCCCEEEEEECCCCCCCCCCEEEECCCCCHHHHHHHHHHHHC RPDMGMTPGGNATVAEWMDHWVDEVIEPRRAPNTTKSYRTRIRMDITPVIGAVPLDRLRP CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHEEEEEECHHHCCCCHHHCCH SHVRMVENRILRGDGRTGTDPRSAATARLTHSILKTALGDAMAEGLIDRNPAALTEVPET HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCC EPVEIAILTTGQAARLIALEPDTKWRLIWRLLFITGMRLGETLGITRQELIRSDGLPCLL CCEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEE VEWQLKEFEKDTVIPAGYRARHLGGRMWLTRPKTRKGQRLIPLPADLAADLESYMDSAGI EEHHHHHCCCCCCCCCCCHHHHCCCEEEEECCCCCCCCEECCCCHHHHHHHHHHHHHCCC PDDQPVFRSGRGNPICKDTLHHAWRRALDRAGLPHVIRIHLRRHATHVLDPARLQRGAAA CCCCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHH GERLQHEPVRRRDQTHQPAHQFQRFHRRMEDPVHGQPLPRSRLRTIPEHGIEAGCAAGII HHHHHCCHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHCHHHCCCHHHHHHHH VFRTRMGHAPAVTGFRACAWFAFSTDGDAGLSVEFLGRGLVEQHVRRETGFGRVVGAIRF HHHHHCCCCCCHHHHHHHEEEEEECCCCCCCCHHHHHCHHHHHHHHHHCCHHHHHHHHHH VRAVDVVVARAGVEVGMPVLVLRLLLICRVAEWDAACVDMQCARPVSEQIVVECPVQRLA HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHCHHHCCCCCHHHEEECCHHHHH CEADGFVRGLQLAVPAGPLFALFGGERIPFGFRLAAVRGAGTSEAVGVRISCASMTFTGH HCCCHHHHHEEEECCCCCEEEEECCCCCCCCEEEEEEECCCCCCCEEEEEEEEEEEEECC MGAFRTQFPVHEQSRIRTVWHAACVHPVDLVADFEARVLDRAGEPMICAAGGKRGHVPSR CCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHH LQDAQNVLPQDYVECDARRIEAQVHETDLVRRVGDRFGGASPVF HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TTTADRREKGSGGITRLANGKYRAFVETTPDPGDGSRRRVSATGRTKSEALRKARDKAL CCCCCCCCCCCCCCEEECCCCEEEEEECCCCCCCCCCEEEECCCCCHHHHHHHHHHHHC RPDMGMTPGGNATVAEWMDHWVDEVIEPRRAPNTTKSYRTRIRMDITPVIGAVPLDRLRP CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHEEEEEECHHHCCCCHHHCCH SHVRMVENRILRGDGRTGTDPRSAATARLTHSILKTALGDAMAEGLIDRNPAALTEVPET HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCC EPVEIAILTTGQAARLIALEPDTKWRLIWRLLFITGMRLGETLGITRQELIRSDGLPCLL CCEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEE VEWQLKEFEKDTVIPAGYRARHLGGRMWLTRPKTRKGQRLIPLPADLAADLESYMDSAGI EEHHHHHCCCCCCCCCCCHHHHCCCEEEEECCCCCCCCEECCCCHHHHHHHHHHHHHCCC PDDQPVFRSGRGNPICKDTLHHAWRRALDRAGLPHVIRIHLRRHATHVLDPARLQRGAAA CCCCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHH GERLQHEPVRRRDQTHQPAHQFQRFHRRMEDPVHGQPLPRSRLRTIPEHGIEAGCAAGII HHHHHCCHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHCHHHCCCHHHHHHHH VFRTRMGHAPAVTGFRACAWFAFSTDGDAGLSVEFLGRGLVEQHVRRETGFGRVVGAIRF HHHHHCCCCCCHHHHHHHEEEEEECCCCCCCCHHHHHCHHHHHHHHHHCCHHHHHHHHHH VRAVDVVVARAGVEVGMPVLVLRLLLICRVAEWDAACVDMQCARPVSEQIVVECPVQRLA HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHCHHHCCCCCHHHEEECCHHHHH CEADGFVRGLQLAVPAGPLFALFGGERIPFGFRLAAVRGAGTSEAVGVRISCASMTFTGH HCCCHHHHHEEEECCCCCEEEEECCCCCCCCEEEEEEECCCCCCCEEEEEEEEEEEEECC MGAFRTQFPVHEQSRIRTVWHAACVHPVDLVADFEARVLDRAGEPMICAAGGKRGHVPSR CCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHH LQDAQNVLPQDYVECDARRIEAQVHETDLVRRVGDRFGGASPVF HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA