| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692187
Identifier: 213692187
GI number: 213692187
Start: 1491875
End: 1492273
Strand: Direct
Name: 213692187
Synonym: Blon_1307
Alternate gene names: NA
Gene position: 1491875-1492273 (Clockwise)
Preceding gene: 213692186
Following gene: 213692188
Centisome position: 52.67
GC content: 54.39
Gene sequence:
>399_bases GTGAAATTGGAATCAAATCATCATTCGGTGTTCCTCATGCACTACCACCTCGTGCTCGTCGTGAAATACCGGCGAAAAGT ATTCGACGACGAAATCTCCGCCCGTGCGCGGGAAATCTTCGAGTACATCGCGCCCAAGTACGGGATAACCGTCGAGGAAT GGAACCACGACCAAGATCATGTGCATATCCTGTTCCGCGCCCAGCCCAAGACGGAACTGTCGAAGTTCATCAACGCATAC AAGAGCGCATCCAGCCGCCTGCTCAAACAGGAGTATCCGCGCATCCGTCAGAAACCCTGGAAGGAATATTTCTGGAGCCG CAGCTTCTGCCTGCTCACCACAAGAGGCGCGCCCATCGAGGTGATACGCCGGTACATCGAGAGTCAGGGACGCAAATGA
Upstream 100 bases:
>100_bases CTCCCGCCTCTTAGCGGAGCGTAGGCGGGAGAATCCTCAGCGTCTCTTCTTGTGCTATCACCTCGATTCAGTCGTGCATT ACTGAATCGAGGTGATAGCA
Downstream 100 bases:
>100_bases ACACGACGACAATCACACGACGTAGGGCGATCAGGTTCGCCTACCCCACCAAGGGGCAGGCGAACCTGATCGACCGCACC ATCGGCTGCGCGCGCCTCGT
Product: transposase IS200-family protein
Products: NA
Alternate protein names: Transposase IS; IS Element Transposase; Transposase -Family Protein; Transposase-Related Protein; Transposase And Inactivated Derivatives; ISSoc3 OrfA Transposase; Transposase Family Protein; Transposase TnA; Transposase OrfA; LOW QUALITY PROTEIN Transposase; Transposase Related Protein; Transposition Helper Protein; IS Element ISTsi3 OrfA-Like Probably Transposase; ISChy9 Transposase OrfA; ISCpe2 Transposase OrfA; ISSoc10 OrfA Transposase; Transposase Repeat Family IS; Transposase ORF A; Transposase OrfA For Insertion Sequence Element; Transposase-Family Protein
Number of amino acids: Translated: 132; Mature: 132
Protein sequence:
>132_residues MKLESNHHSVFLMHYHLVLVVKYRRKVFDDEISARAREIFEYIAPKYGITVEEWNHDQDHVHILFRAQPKTELSKFINAY KSASSRLLKQEYPRIRQKPWKEYFWSRSFCLLTTRGAPIEVIRRYIESQGRK
Sequences:
>Translated_132_residues MKLESNHHSVFLMHYHLVLVVKYRRKVFDDEISARAREIFEYIAPKYGITVEEWNHDQDHVHILFRAQPKTELSKFINAY KSASSRLLKQEYPRIRQKPWKEYFWSRSFCLLTTRGAPIEVIRRYIESQGRK >Mature_132_residues MKLESNHHSVFLMHYHLVLVVKYRRKVFDDEISARAREIFEYIAPKYGITVEEWNHDQDHVHILFRAQPKTELSKFINAY KSASSRLLKQEYPRIRQKPWKEYFWSRSFCLLTTRGAPIEVIRRYIESQGRK
Specific function: Unknown
COG id: COG1943
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16028; Mature: 16028
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLESNHHSVFLMHYHLVLVVKYRRKVFDDEISARAREIFEYIAPKYGITVEEWNHDQDH CCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCE VHILFRAQPKTELSKFINAYKSASSRLLKQEYPRIRQKPWKEYFWSRSFCLLTTRGAPIE EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCEEEEEECCCCHH VIRRYIESQGRK HHHHHHHHCCCC >Mature Secondary Structure MKLESNHHSVFLMHYHLVLVVKYRRKVFDDEISARAREIFEYIAPKYGITVEEWNHDQDH CCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCE VHILFRAQPKTELSKFINAYKSASSRLLKQEYPRIRQKPWKEYFWSRSFCLLTTRGAPIE EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCEEEEEECCCCHH VIRRYIESQGRK HHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA