| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692160
Identifier: 213692160
GI number: 213692160
Start: 1476511
End: 1477566
Strand: Direct
Name: 213692160
Synonym: Blon_1280
Alternate gene names: NA
Gene position: 1476511-1477566 (Clockwise)
Preceding gene: 213692159
Following gene: 213692161
Centisome position: 52.12
GC content: 68.84
Gene sequence:
>1056_bases TTGACCGGCCGGCACACGCGCCCACGCCCCCGCACGGGACGGCGCATCCTCCAGCTCCTGTCCGGGCTGAGCCTCACGCT CGCCATCCTGTGCGCGTACCACGTCGGCTGGATATGGTGGGGCGACTCGCTCGACAGCATCCACACGCAGCAGACCCTCG CCGCCCGCCACGGCGTCAAGGACGTGGACGCGGGCGACACGACCCGGATCGCGAAACCCAGGGACGGCGACCCGCCCAAG GAGACCGAACCCGCATACGGAACCGTCCTCGGATGGATGTGGATACCCCGGTTCGGCAACGACTGGAAACGCGCCATCCA GGAAGGCACCGACACGAACGTGCTCGCCAACCAGGGGATAGGCCACTACGAGCACACGCCCATGCCCGGCGGGAAAGGCA ACAGCGCGTACGCGGGACACCGCACGCCCGGCGACCTGGGACCCGCCGACACGCTGCAGCCCGGCGACCCGATCGTCATC CAGACCGCCGGACACTGGTACATATACCGGGTGCAATCCTCATGGATGACCACGCCCGACGACATCGGCGTGCTCGAACC GGACGGGGACGCGCGCACCATCACGCTCACCACCTGCAAATGGTCGCTCGACGAGGCCGACAGCCTGTCCGCGCGCCTCA TCGTGCGCGGACGCCTCGAATCCTGGTCGGACGTCAAGGACGGGATCCCCGCCGAACTCGCCGGGACGGCCGCACGGCCC GCCGCGACGGCACGCACGACCGTCAGCCGCGTCATACGGCATATGAGTGCCGCCATGCCCGTCAGCCGCATCCTCGCCGT CATGGCGGGCGGCGTCTGGCTCCTGCTCGCGGGCCTCGCATGGCTCATATGGCATGGGGGCAGGCCCCGGCGCGAACCGA CATGGAATCCGCTGACCCTCGCCTGGCGCCTCCAGACGGGACCCATCCCATTGCGGACCATCCTCTTCATCCTGTTCTGG ACCATGATCCTGTTCGCCGAATGGGCGTGGCTCAGCCCCTGGCTCGACGCGACGATCCCCCTGTTCTCCACCAGCCCGTC CATGACGGGCGCATAG
Upstream 100 bases:
>100_bases AGGCCATGTTCCCCTTCCCCGACACGCCCGGATACGCGGACCTCGTCATCCTCGACGCGGTCACACGAACCCTCGGACGC CATGAGGACGGGGAAGAGCG
Downstream 100 bases:
>100_bases GTGGCGCGCATGGACGACAGGACGAGGACCATGAGGCCGGTGCGGGTGAGCGGCGGCACGCGACGCCGGCGGCGCATGCG GCGCGCCGACCCGGACGTGC
Product: peptidase C60, sortase A and B
Products: NA
Alternate protein names: Sortase; Sortase-Like Protein; Peptidase; Integral Membrane Protein; Sortase Family Protein LPXTG-Site Transpeptidase; Ortase Yhcs B.Subtilis Ortholog
Number of amino acids: Translated: 351; Mature: 350
Protein sequence:
>351_residues MTGRHTRPRPRTGRRILQLLSGLSLTLAILCAYHVGWIWWGDSLDSIHTQQTLAARHGVKDVDAGDTTRIAKPRDGDPPK ETEPAYGTVLGWMWIPRFGNDWKRAIQEGTDTNVLANQGIGHYEHTPMPGGKGNSAYAGHRTPGDLGPADTLQPGDPIVI QTAGHWYIYRVQSSWMTTPDDIGVLEPDGDARTITLTTCKWSLDEADSLSARLIVRGRLESWSDVKDGIPAELAGTAARP AATARTTVSRVIRHMSAAMPVSRILAVMAGGVWLLLAGLAWLIWHGGRPRREPTWNPLTLAWRLQTGPIPLRTILFILFW TMILFAEWAWLSPWLDATIPLFSTSPSMTGA
Sequences:
>Translated_351_residues MTGRHTRPRPRTGRRILQLLSGLSLTLAILCAYHVGWIWWGDSLDSIHTQQTLAARHGVKDVDAGDTTRIAKPRDGDPPK ETEPAYGTVLGWMWIPRFGNDWKRAIQEGTDTNVLANQGIGHYEHTPMPGGKGNSAYAGHRTPGDLGPADTLQPGDPIVI QTAGHWYIYRVQSSWMTTPDDIGVLEPDGDARTITLTTCKWSLDEADSLSARLIVRGRLESWSDVKDGIPAELAGTAARP AATARTTVSRVIRHMSAAMPVSRILAVMAGGVWLLLAGLAWLIWHGGRPRREPTWNPLTLAWRLQTGPIPLRTILFILFW TMILFAEWAWLSPWLDATIPLFSTSPSMTGA >Mature_350_residues TGRHTRPRPRTGRRILQLLSGLSLTLAILCAYHVGWIWWGDSLDSIHTQQTLAARHGVKDVDAGDTTRIAKPRDGDPPKE TEPAYGTVLGWMWIPRFGNDWKRAIQEGTDTNVLANQGIGHYEHTPMPGGKGNSAYAGHRTPGDLGPADTLQPGDPIVIQ TAGHWYIYRVQSSWMTTPDDIGVLEPDGDARTITLTTCKWSLDEADSLSARLIVRGRLESWSDVKDGIPAELAGTAARPA ATARTTVSRVIRHMSAAMPVSRILAVMAGGVWLLLAGLAWLIWHGGRPRREPTWNPLTLAWRLQTGPIPLRTILFILFWT MILFAEWAWLSPWLDATIPLFSTSPSMTGA
Specific function: Unknown
COG id: COG3764
COG function: function code M; Sortase (surface protein transpeptidase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38713; Mature: 38582
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGRHTRPRPRTGRRILQLLSGLSLTLAILCAYHVGWIWWGDSLDSIHTQQTLAARHGVK CCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHCEEEECCCHHHHHHHHHHHHHCCCC DVDAGDTTRIAKPRDGDPPKETEPAYGTVLGWMWIPRFGNDWKRAIQEGTDTNVLANQGI CCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCCCCHHCCCC GHYEHTPMPGGKGNSAYAGHRTPGDLGPADTLQPGDPIVIQTAGHWYIYRVQSSWMTTPD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEECCCCCCCC DIGVLEPDGDARTITLTTCKWSLDEADSLSARLIVRGRLESWSDVKDGIPAELAGTAARP CCCCCCCCCCCEEEEEEEEEECCCCCCCCCEEEEEEECCCCHHHHHCCCCHHHHCCCCCC AATARTTVSRVIRHMSAAMPVSRILAVMAGGVWLLLAGLAWLIWHGGRPRREPTWNPLTL HHHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEE AWRLQTGPIPLRTILFILFWTMILFAEWAWLSPWLDATIPLFSTSPSMTGA EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCEEECCCCCCCC >Mature Secondary Structure TGRHTRPRPRTGRRILQLLSGLSLTLAILCAYHVGWIWWGDSLDSIHTQQTLAARHGVK CCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHCEEEECCCHHHHHHHHHHHHHCCCC DVDAGDTTRIAKPRDGDPPKETEPAYGTVLGWMWIPRFGNDWKRAIQEGTDTNVLANQGI CCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCCCCHHCCCC GHYEHTPMPGGKGNSAYAGHRTPGDLGPADTLQPGDPIVIQTAGHWYIYRVQSSWMTTPD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEECCCCCCCC DIGVLEPDGDARTITLTTCKWSLDEADSLSARLIVRGRLESWSDVKDGIPAELAGTAARP CCCCCCCCCCCEEEEEEEEEECCCCCCCCCEEEEEEECCCCHHHHHCCCCHHHHCCCCCC AATARTTVSRVIRHMSAAMPVSRILAVMAGGVWLLLAGLAWLIWHGGRPRREPTWNPLTL HHHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEE AWRLQTGPIPLRTILFILFWTMILFAEWAWLSPWLDATIPLFSTSPSMTGA EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA