| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692161
Identifier: 213692161
GI number: 213692161
Start: 1478116
End: 1478655
Strand: Direct
Name: 213692161
Synonym: Blon_1281
Alternate gene names: NA
Gene position: 1478116-1478655 (Clockwise)
Preceding gene: 213692160
Following gene: 213692162
Centisome position: 52.18
GC content: 61.67
Gene sequence:
>540_bases ATGGGGGACAGGAAACTTGAGACGGTCGCCAGAGAGGTGTTCCTGAGCATTCCACCCGCCGTCAGGACGGGCGTGTTCAT CGACGTTTTCACGCCATGCGACTGGCATCACGCCGCCCGCTGCATGGTCGATTACGCGGGGATTCTAGACGACCCGCGCG AACCGTTCGCCCCCGCCTGCGACATGCCGGTCATCTGCACGACCGCCGTCACGGAAAAGACCGTCGTCTCGGACGTGCGC CCGCTGGCCTATCTGCCCGACGAGGCGTCCGTCTACATGCTGGTAGTGGACATGGAGATGGACTGCGTCGAAGTGGACGT CGAAAGGAACGGAATCGTGTACGTGGAAAACCGTCCCGACGCCATCGGTCAGGCGTACGCCGACCTCGCCGACGACCTGA ACGACGCCGTAAGCGAATCGGAGAAGTTCGCCCTGTACGATTCGTTGAACGCGGTCTACCAGTTCGCATACCGGCTTTCC GAACTGACCCAGCGGCATCTCGTCTTGGAAAGGAGCCGGACTTGGAAACTCGCGGAGTGA
Upstream 100 bases:
>100_bases GGTCCGGTGCCGCATACAACGGCAAGCCGTTCAGTCGTACGTTCACCGCAGAACAGGCGAAGCAACTGCAATTCATCCAC TATTAGAAAGGACTTCCCCG
Downstream 100 bases:
>100_bases GAGTCAGGTTCTCCTCCCCCGCGCATGAGAACCGGTACTGGTGGACGATACTCGAATGCGACGGACGGTACGTGGTGTGT GTACGCGAACGTCTCGCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MGDRKLETVAREVFLSIPPAVRTGVFIDVFTPCDWHHAARCMVDYAGILDDPREPFAPACDMPVICTTAVTEKTVVSDVR PLAYLPDEASVYMLVVDMEMDCVEVDVERNGIVYVENRPDAIGQAYADLADDLNDAVSESEKFALYDSLNAVYQFAYRLS ELTQRHLVLERSRTWKLAE
Sequences:
>Translated_179_residues MGDRKLETVAREVFLSIPPAVRTGVFIDVFTPCDWHHAARCMVDYAGILDDPREPFAPACDMPVICTTAVTEKTVVSDVR PLAYLPDEASVYMLVVDMEMDCVEVDVERNGIVYVENRPDAIGQAYADLADDLNDAVSESEKFALYDSLNAVYQFAYRLS ELTQRHLVLERSRTWKLAE >Mature_178_residues GDRKLETVAREVFLSIPPAVRTGVFIDVFTPCDWHHAARCMVDYAGILDDPREPFAPACDMPVICTTAVTEKTVVSDVRP LAYLPDEASVYMLVVDMEMDCVEVDVERNGIVYVENRPDAIGQAYADLADDLNDAVSESEKFALYDSLNAVYQFAYRLSE LTQRHLVLERSRTWKLAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20171; Mature: 20040
Theoretical pI: Translated: 4.17; Mature: 4.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDRKLETVAREVFLSIPPAVRTGVFIDVFTPCDWHHAARCMVDYAGILDDPREPFAPAC CCCHHHHHHHHHHHHCCCCHHHHCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCC DMPVICTTAVTEKTVVSDVRPLAYLPDEASVYMLVVDMEMDCVEVDVERNGIVYVENRPD CCCEEEEHHHHHHHHHHHCCCCEECCCCCCEEEEEEECCCCEEEEEECCCCEEEECCCCC AIGQAYADLADDLNDAVSESEKFALYDSLNAVYQFAYRLSELTQRHLVLERSRTWKLAE HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure GDRKLETVAREVFLSIPPAVRTGVFIDVFTPCDWHHAARCMVDYAGILDDPREPFAPAC CCHHHHHHHHHHHHCCCCHHHHCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCC DMPVICTTAVTEKTVVSDVRPLAYLPDEASVYMLVVDMEMDCVEVDVERNGIVYVENRPD CCCEEEEHHHHHHHHHHHCCCCEECCCCCCEEEEEEECCCCEEEEEECCCCEEEECCCCC AIGQAYADLADDLNDAVSESEKFALYDSLNAVYQFAYRLSELTQRHLVLERSRTWKLAE HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA