The gene/protein map for NC_008817 is currently unavailable.
Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is 213692106

Identifier: 213692106

GI number: 213692106

Start: 1408273

End: 1408755

Strand: Direct

Name: 213692106

Synonym: Blon_1225

Alternate gene names: NA

Gene position: 1408273-1408755 (Clockwise)

Preceding gene: 213692105

Following gene: 213692107

Centisome position: 49.71

GC content: 62.94

Gene sequence:

>483_bases
GTGGGCGCTAAAAGGCGGGGCGGGACCTGTCAAATTCCACGTCGGATGGAGCAATCACATACGGTGTGTTACGCGCGTGT
CAGCTCGTCTGACCAGAAGGACGATTTGACACGTCAGGCCGACCGGTTGAAGGCGTTCGCCCTTGGCATGGGCGTCGAGA
AGCCCGAGGTGGTCACGGAGACGGGTTCCGGCATGAACGACAAACGACGCAAGCTCAACCGGCTGTTATCCGACCCGACC
GTCGGCACGCTGATCGTGGAGCATCGCGACCGGCTCGCCCGTATGAACATGGGACTGGTGGAGAGCGCGTTGAAGGCGCA
GGGACGCCGAATCATCGTGGTGGATGACACGGAGCCGGACGACGATCTGGTGCGCGACATGACCGAGGTGCTGACCTCGT
TCTGCGCGAGACTGTACGGGCGTCGTGCCGCCAAGCACCGTGCGGAGAAGGCGTTGGAGGCGATGCGCGATGAGCGCGTA
TGA

Upstream 100 bases:

>100_bases
CTGCAGCGCAGGCAATAGGCTATTCAGGTTCCTTGGCTGATCTTGAACACATTGCACCTACACTCCCGTTTTATCGGCGT
AAACGTGCTGAATCCCTGTT

Downstream 100 bases:

>100_bases
GGCCGTTAGGATTCGGCTCGACCCAACCCCACGGCAGACACGGCTGTTGGAGTCCCATGCGGGTGGTGCGCGTTTCGCGT
ACAATCTGATGCTCGCGCAC

Product: Resolvase, N-terminal domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MGAKRRGGTCQIPRRMEQSHTVCYARVSSSDQKDDLTRQADRLKAFALGMGVEKPEVVTETGSGMNDKRRKLNRLLSDPT
VGTLIVEHRDRLARMNMGLVESALKAQGRRIIVVDDTEPDDDLVRDMTEVLTSFCARLYGRRAAKHRAEKALEAMRDERV

Sequences:

>Translated_160_residues
MGAKRRGGTCQIPRRMEQSHTVCYARVSSSDQKDDLTRQADRLKAFALGMGVEKPEVVTETGSGMNDKRRKLNRLLSDPT
VGTLIVEHRDRLARMNMGLVESALKAQGRRIIVVDDTEPDDDLVRDMTEVLTSFCARLYGRRAAKHRAEKALEAMRDERV
>Mature_159_residues
GAKRRGGTCQIPRRMEQSHTVCYARVSSSDQKDDLTRQADRLKAFALGMGVEKPEVVTETGSGMNDKRRKLNRLLSDPTV
GTLIVEHRDRLARMNMGLVESALKAQGRRIIVVDDTEPDDDLVRDMTEVLTSFCARLYGRRAAKHRAEKALEAMRDERV

Specific function: Unknown

COG id: COG2452

COG function: function code L; Predicted site-specific integrase-resolvase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR006119
- InterPro:   IPR010093 [H]

Pfam domain/function: PF00376 MerR; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 18058; Mature: 17927

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: PS00397 RECOMBINASES_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAKRRGGTCQIPRRMEQSHTVCYARVSSSDQKDDLTRQADRLKAFALGMGVEKPEVVTE
CCCCCCCCCCCCCHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEC
TGSGMNDKRRKLNRLLSDPTVGTLIVEHRDRLARMNMGLVESALKAQGRRIIVVDDTEPD
CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC
DDLVRDMTEVLTSFCARLYGRRAAKHRAEKALEAMRDERV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GAKRRGGTCQIPRRMEQSHTVCYARVSSSDQKDDLTRQADRLKAFALGMGVEKPEVVTE
CCCCCCCCCCCCHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEC
TGSGMNDKRRKLNRLLSDPTVGTLIVEHRDRLARMNMGLVESALKAQGRRIIVVDDTEPD
CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC
DDLVRDMTEVLTSFCARLYGRRAAKHRAEKALEAMRDERV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]