Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

Click here to switch to the map view.

The map label for this gene is 213692100

Identifier: 213692100

GI number: 213692100

Start: 1401465

End: 1401962

Strand: Direct

Name: 213692100

Synonym: Blon_1219

Alternate gene names: NA

Gene position: 1401465-1401962 (Clockwise)

Preceding gene: 213692097

Following gene: 213692101

Centisome position: 49.47

GC content: 70.68

Gene sequence:

>498_bases
GTGACATGCCCATCGGCCGGCAGGCGCGCCACGTCGCCCTCCCCTGGACGGCGGGCCGCGGAACCGGAGGCCATGCGTCG
GGGACGCATGCGCGCGGGCATGCACGAGAACATCATCGGTTGGGAGAACCTGCCCGCAAGCCTCCTCGCCCGCATCCGGG
ACGGGATCGTGGCCCAACGGGACGGCGACGAATGGACGCGCTTCCGCCCCGCATTGGCCGGCAGGACCGATGCGGGCGAA
CCCTACATCGTGGACTCGGACTGCGTCGACCATTGGGTCGGCGACGGCTCCGCGTTCCCCGACCCGGACACGCCATTGCC
CGAGGCCGTGCGGCGCGACCCCATGCCGGGCGACCTCATCCGCCTCCACAAGACCGACGACCCGGCCATCGCCGACATCG
GCCGCTATGAGGGCCGGTCGGCGATGGCCGGGTGGATGACCGACAACGGGCCCTACTACGCGCGCGAATGGACGCTCGAC
AGGGTCGTCGAACAATAA

Upstream 100 bases:

>100_bases
CCCGCCGTCGACCATGCGACCGCGTGCACGATATCGTATTCCGTCCCGTTCATGCGGCGCGTCGCCCACGGGCCGGAAGC
GGGGGGAGGGTCTGCCGTGT

Downstream 100 bases:

>100_bases
GGGTCGCGTTTCGCATACGACGGCGTATGCGAAACGAAACGGACAAACCATTCTCATGGTTCGCGGACGATATGCCGGTA
TTGACGGGAAAGGGCTTCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MTCPSAGRRATSPSPGRRAAEPEAMRRGRMRAGMHENIIGWENLPASLLARIRDGIVAQRDGDEWTRFRPALAGRTDAGE
PYIVDSDCVDHWVGDGSAFPDPDTPLPEAVRRDPMPGDLIRLHKTDDPAIADIGRYEGRSAMAGWMTDNGPYYAREWTLD
RVVEQ

Sequences:

>Translated_165_residues
MTCPSAGRRATSPSPGRRAAEPEAMRRGRMRAGMHENIIGWENLPASLLARIRDGIVAQRDGDEWTRFRPALAGRTDAGE
PYIVDSDCVDHWVGDGSAFPDPDTPLPEAVRRDPMPGDLIRLHKTDDPAIADIGRYEGRSAMAGWMTDNGPYYAREWTLD
RVVEQ
>Mature_164_residues
TCPSAGRRATSPSPGRRAAEPEAMRRGRMRAGMHENIIGWENLPASLLARIRDGIVAQRDGDEWTRFRPALAGRTDAGEP
YIVDSDCVDHWVGDGSAFPDPDTPLPEAVRRDPMPGDLIRLHKTDDPAIADIGRYEGRSAMAGWMTDNGPYYAREWTLDR
VVEQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18330; Mature: 18198

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTCPSAGRRATSPSPGRRAAEPEAMRRGRMRAGMHENIIGWENLPASLLARIRDGIVAQR
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCEECC
DGDEWTRFRPALAGRTDAGEPYIVDSDCVDHWVGDGSAFPDPDTPLPEAVRRDPMPGDLI
CCCHHHHHHHHHCCCCCCCCCEEECCHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCEE
RLHKTDDPAIADIGRYEGRSAMAGWMTDNGPYYAREWTLDRVVEQ
EEECCCCCHHHHHHHCCCCCCEECEEECCCCEEEHHCCHHHHHCC
>Mature Secondary Structure 
TCPSAGRRATSPSPGRRAAEPEAMRRGRMRAGMHENIIGWENLPASLLARIRDGIVAQR
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCEECC
DGDEWTRFRPALAGRTDAGEPYIVDSDCVDHWVGDGSAFPDPDTPLPEAVRRDPMPGDLI
CCCHHHHHHHHHCCCCCCCCCEEECCHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCEE
RLHKTDDPAIADIGRYEGRSAMAGWMTDNGPYYAREWTLDRVVEQ
EEECCCCCHHHHHHHCCCCCCEECEEECCCCEEEHHCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA