| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692100
Identifier: 213692100
GI number: 213692100
Start: 1401465
End: 1401962
Strand: Direct
Name: 213692100
Synonym: Blon_1219
Alternate gene names: NA
Gene position: 1401465-1401962 (Clockwise)
Preceding gene: 213692097
Following gene: 213692101
Centisome position: 49.47
GC content: 70.68
Gene sequence:
>498_bases GTGACATGCCCATCGGCCGGCAGGCGCGCCACGTCGCCCTCCCCTGGACGGCGGGCCGCGGAACCGGAGGCCATGCGTCG GGGACGCATGCGCGCGGGCATGCACGAGAACATCATCGGTTGGGAGAACCTGCCCGCAAGCCTCCTCGCCCGCATCCGGG ACGGGATCGTGGCCCAACGGGACGGCGACGAATGGACGCGCTTCCGCCCCGCATTGGCCGGCAGGACCGATGCGGGCGAA CCCTACATCGTGGACTCGGACTGCGTCGACCATTGGGTCGGCGACGGCTCCGCGTTCCCCGACCCGGACACGCCATTGCC CGAGGCCGTGCGGCGCGACCCCATGCCGGGCGACCTCATCCGCCTCCACAAGACCGACGACCCGGCCATCGCCGACATCG GCCGCTATGAGGGCCGGTCGGCGATGGCCGGGTGGATGACCGACAACGGGCCCTACTACGCGCGCGAATGGACGCTCGAC AGGGTCGTCGAACAATAA
Upstream 100 bases:
>100_bases CCCGCCGTCGACCATGCGACCGCGTGCACGATATCGTATTCCGTCCCGTTCATGCGGCGCGTCGCCCACGGGCCGGAAGC GGGGGGAGGGTCTGCCGTGT
Downstream 100 bases:
>100_bases GGGTCGCGTTTCGCATACGACGGCGTATGCGAAACGAAACGGACAAACCATTCTCATGGTTCGCGGACGATATGCCGGTA TTGACGGGAAAGGGCTTCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MTCPSAGRRATSPSPGRRAAEPEAMRRGRMRAGMHENIIGWENLPASLLARIRDGIVAQRDGDEWTRFRPALAGRTDAGE PYIVDSDCVDHWVGDGSAFPDPDTPLPEAVRRDPMPGDLIRLHKTDDPAIADIGRYEGRSAMAGWMTDNGPYYAREWTLD RVVEQ
Sequences:
>Translated_165_residues MTCPSAGRRATSPSPGRRAAEPEAMRRGRMRAGMHENIIGWENLPASLLARIRDGIVAQRDGDEWTRFRPALAGRTDAGE PYIVDSDCVDHWVGDGSAFPDPDTPLPEAVRRDPMPGDLIRLHKTDDPAIADIGRYEGRSAMAGWMTDNGPYYAREWTLD RVVEQ >Mature_164_residues TCPSAGRRATSPSPGRRAAEPEAMRRGRMRAGMHENIIGWENLPASLLARIRDGIVAQRDGDEWTRFRPALAGRTDAGEP YIVDSDCVDHWVGDGSAFPDPDTPLPEAVRRDPMPGDLIRLHKTDDPAIADIGRYEGRSAMAGWMTDNGPYYAREWTLDR VVEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18330; Mature: 18198
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTCPSAGRRATSPSPGRRAAEPEAMRRGRMRAGMHENIIGWENLPASLLARIRDGIVAQR CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCEECC DGDEWTRFRPALAGRTDAGEPYIVDSDCVDHWVGDGSAFPDPDTPLPEAVRRDPMPGDLI CCCHHHHHHHHHCCCCCCCCCEEECCHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCEE RLHKTDDPAIADIGRYEGRSAMAGWMTDNGPYYAREWTLDRVVEQ EEECCCCCHHHHHHHCCCCCCEECEEECCCCEEEHHCCHHHHHCC >Mature Secondary Structure TCPSAGRRATSPSPGRRAAEPEAMRRGRMRAGMHENIIGWENLPASLLARIRDGIVAQR CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCEECC DGDEWTRFRPALAGRTDAGEPYIVDSDCVDHWVGDGSAFPDPDTPLPEAVRRDPMPGDLI CCCHHHHHHHHHCCCCCCCCCEEECCHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCEE RLHKTDDPAIADIGRYEGRSAMAGWMTDNGPYYAREWTLDRVVEQ EEECCCCCHHHHHHHCCCCCCEECEEECCCCEEEHHCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA