| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692101
Identifier: 213692101
GI number: 213692101
Start: 1402061
End: 1403044
Strand: Direct
Name: 213692101
Synonym: Blon_1220
Alternate gene names: NA
Gene position: 1402061-1403044 (Clockwise)
Preceding gene: 213692100
Following gene: 213692102
Centisome position: 49.49
GC content: 57.72
Gene sequence:
>984_bases ATGCCCATCGAATCGGTGGGCATCGGCGATCTGGTCCTCACCGGGTCGGATGGTTGGAAGCCGGTTCTTGAGACCATGAC CGAAAAACGGGATGATGCCATTATCCTGCACGGGCAGGGTTCTAATGGGATAATCTGCGCGCCGGAAAGCATGTTTATGG CGGGACACCGTTTCCAGGGCCCCTGGGACAACGCAAACCGCACCTACCCCACCCTGTTCGAAAAGGACGGCTGGCGGTCT GCTTCGAACATGGATGCTCACATGTGGCTTAACGTCGGCCGGATCCCGGAATTGCCCATCCCGTCATTGGAGAACGTCGT GTTCGACGAGGAGTTCTTCTATTTCGTGGGCCGTTTCCTCGGCGATGGTTGGGTGTGGGAATCACGGGATGGAAGCACCA ACCAGCAGGTGGGCGTCTGCTGCGGGTTCAGGGATGTCGAATCCCTGATGCCCCACATGAAGGCGCTGGGCTGGAAGTTC AGCGAACAGGACCAGAGGACCGGCCACTACTGGCGTTGCTACGACAAAACGAAATTCCACTGGTTCGAGGACAATTTCGG CCGGGGAGCCATCAACAAGCATCTGCCCGGCTGGACGTTCGGCATGAAAAAGGAATGGCGGCAGGCCCTGTTACAGGGGT ACTGGGAGTCGGACGGCAACCCGATCCGGAACGGCATGCACGCGACCTCGATCAGCCGAAAACTCATACTCGGAATCAAG ACCCTGGAGGCTGGACTCGGGCGCGCATCCAGTATTTCCAGCCATGAACCCAACAGAGTGTGCCTCATCGAGGGACGCAG GGTCAACGAACGAACCAATTATCTGATCAACACGTATGACCGGATCCGCAAATCCATCATCTGCGACCGAGGCTATTGGG CTCACATGCGCAAACGCGAGGATATGAGGGAAACCATCACCATGCATGCGCTGACCCTCGAAGCCGACTCGTACATGGTG GACGGGATTCTCGTCAGGGCATGA
Upstream 100 bases:
>100_bases AAGGGTCGCGTTTCGCATACGACGGCGTATGCGAAACGAAACGGACAAACCATTCTCATGGTTCGCGGACGATATGCCGG TATTGACGGGAAAGGGCTTC
Downstream 100 bases:
>100_bases TGCGGGGAACGCATACAGTCATGTATGCAGAACAATTCTGAACACAACGGTCTCATCGGCAGCCTCTTCTCCGGATACGG GGGATTGGATCTCGGCGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 327; Mature: 326
Protein sequence:
>327_residues MPIESVGIGDLVLTGSDGWKPVLETMTEKRDDAIILHGQGSNGIICAPESMFMAGHRFQGPWDNANRTYPTLFEKDGWRS ASNMDAHMWLNVGRIPELPIPSLENVVFDEEFFYFVGRFLGDGWVWESRDGSTNQQVGVCCGFRDVESLMPHMKALGWKF SEQDQRTGHYWRCYDKTKFHWFEDNFGRGAINKHLPGWTFGMKKEWRQALLQGYWESDGNPIRNGMHATSISRKLILGIK TLEAGLGRASSISSHEPNRVCLIEGRRVNERTNYLINTYDRIRKSIICDRGYWAHMRKREDMRETITMHALTLEADSYMV DGILVRA
Sequences:
>Translated_327_residues MPIESVGIGDLVLTGSDGWKPVLETMTEKRDDAIILHGQGSNGIICAPESMFMAGHRFQGPWDNANRTYPTLFEKDGWRS ASNMDAHMWLNVGRIPELPIPSLENVVFDEEFFYFVGRFLGDGWVWESRDGSTNQQVGVCCGFRDVESLMPHMKALGWKF SEQDQRTGHYWRCYDKTKFHWFEDNFGRGAINKHLPGWTFGMKKEWRQALLQGYWESDGNPIRNGMHATSISRKLILGIK TLEAGLGRASSISSHEPNRVCLIEGRRVNERTNYLINTYDRIRKSIICDRGYWAHMRKREDMRETITMHALTLEADSYMV DGILVRA >Mature_326_residues PIESVGIGDLVLTGSDGWKPVLETMTEKRDDAIILHGQGSNGIICAPESMFMAGHRFQGPWDNANRTYPTLFEKDGWRSA SNMDAHMWLNVGRIPELPIPSLENVVFDEEFFYFVGRFLGDGWVWESRDGSTNQQVGVCCGFRDVESLMPHMKALGWKFS EQDQRTGHYWRCYDKTKFHWFEDNFGRGAINKHLPGWTFGMKKEWRQALLQGYWESDGNPIRNGMHATSISRKLILGIKT LEAGLGRASSISSHEPNRVCLIEGRRVNERTNYLINTYDRIRKSIICDRGYWAHMRKREDMRETITMHALTLEADSYMVD GILVRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37620; Mature: 37489
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: PS50819 INTEIN_ENDONUCLEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIESVGIGDLVLTGSDGWKPVLETMTEKRDDAIILHGQGSNGIICAPESMFMAGHRFQG CCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCEEEEEECCCCCEEECCHHHHHCCCCCCC PWDNANRTYPTLFEKDGWRSASNMDAHMWLNVGRIPELPIPSLENVVFDEEFFYFVGRFL CCCCCCCCCCEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHEECHHHHHHHHHHH GDGWVWESRDGSTNQQVGVCCGFRDVESLMPHMKALGWKFSEQDQRTGHYWRCYDKTKFH CCCCEEECCCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCEEE WFEDNFGRGAINKHLPGWTFGMKKEWRQALLQGYWESDGNPIRNGMHATSISRKLILGIK EECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHEEHH TLEAGLGRASSISSHEPNRVCLIEGRRVNERTNYLINTYDRIRKSIICDRGYWAHMRKRE HHHHHCCCCCCCCCCCCCEEEEEECCCCCCHHHHEEHHHHHHHHHHHCCCCHHHHHHHHH DMRETITMHALTLEADSYMVDGILVRA HHHHHHHHEEEEEECCCEEECEEEEEC >Mature Secondary Structure PIESVGIGDLVLTGSDGWKPVLETMTEKRDDAIILHGQGSNGIICAPESMFMAGHRFQG CCCCCCCCEEEEECCCCCHHHHHHHHCCCCCEEEEEECCCCCEEECCHHHHHCCCCCCC PWDNANRTYPTLFEKDGWRSASNMDAHMWLNVGRIPELPIPSLENVVFDEEFFYFVGRFL CCCCCCCCCCEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHEECHHHHHHHHHHH GDGWVWESRDGSTNQQVGVCCGFRDVESLMPHMKALGWKFSEQDQRTGHYWRCYDKTKFH CCCCEEECCCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCEEE WFEDNFGRGAINKHLPGWTFGMKKEWRQALLQGYWESDGNPIRNGMHATSISRKLILGIK EECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHEEHH TLEAGLGRASSISSHEPNRVCLIEGRRVNERTNYLINTYDRIRKSIICDRGYWAHMRKRE HHHHHCCCCCCCCCCCCCEEEEEECCCCCCHHHHEEHHHHHHHHHHHCCCCHHHHHHHHH DMRETITMHALTLEADSYMVDGILVRA HHHHHHHHEEEEEECCCEEECEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA