| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692083
Identifier: 213692083
GI number: 213692083
Start: 1386808
End: 1387677
Strand: Direct
Name: 213692083
Synonym: Blon_1202
Alternate gene names: NA
Gene position: 1386808-1387677 (Clockwise)
Preceding gene: 213692082
Following gene: 213692084
Centisome position: 48.96
GC content: 68.16
Gene sequence:
>870_bases ATGGTCATGGACAGGAACAACAGGAGCCACAAGCCGAAGGGCACACCCGACGGCGGCAGATTCGAGACGGGGGACACGGG CGGCGCGTCGGGTGACGTGGCCGCGCCCGGCATGGATCCGGCCACGTGCCTGACCGTCCGGGGGTTTGACGATGCGAACC GGCGCATGGACGGATGGTACGGGCGGCTGGCGGGCCTGGAGAAGTCGGGCGATGACCACGATATCCGGAGGATACGCGGA TGGTCGGCCGCGTTCGACCGATGGCAGAGAATCCACGGGGACGAGGTGGGCGCGTTCGTCGCCCGGCGCGGCGATCTGAT CTCGTCGGACAGGGAGGCGGCCGCGTTCATGCTCGCCCGCCGCGACGTGCTTCGCAAGACGTACCCCGAATTCGGCGAGC TCGACCGGCGGGTCGACGGGGAGATCCGCAGGCTCGAACGGGAGCCGAAACCGTCGAGGGAGTACGTGGACGCGATCGAC GCGTTCGAATCCTACAGCAGGACCCATGCGGACGAGATCGCCGCATACGAGGAGAAGCGCGGCAAGGAGCTGTCAAGCGC CAGGGAGGCGGCCGCCTACATGCTCGCCAAGGCCGGGCTTCTCAACGAGTCGATCAGGCGGGGCAACATGCTCGCCTTGG CGGACGAGCATGACTGGGGGGCGTTGGGCGACCGGATCGCGGAGGGGGATGGCGCGCAACAGTATTCCCATGCGCTCGCC GGCCGTTACGGGCTCGATCCGGAACAGGAGCGGATCCTCATGGAGGACACGGACGCGCATCTCGGCGAGGAAAGAGACCC GGGACAGGCGGCTCGGGAGATGGACCGGCGCTACCGTCTCGCCGCCCGGCTGCTCGGCAACATCGACTGA
Upstream 100 bases:
>100_bases AAGTACGGGCTGACGATGACCGCTCGAGAGAAACAGCAGACCATCACCTACCTCGCGCAATGCGTGGCGGGCAAAAACCA GTAGCAAAGGAGATTCGACC
Downstream 100 bases:
>100_bases CGGGAAAGGGGATTGGGGGAATGGCTCAGCTGATCATCGGCGGCGAATGCACGACCCTGCGGGAGACGGACCCGGACACG CTCGCGCTCATGGCCGTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MVMDRNNRSHKPKGTPDGGRFETGDTGGASGDVAAPGMDPATCLTVRGFDDANRRMDGWYGRLAGLEKSGDDHDIRRIRG WSAAFDRWQRIHGDEVGAFVARRGDLISSDREAAAFMLARRDVLRKTYPEFGELDRRVDGEIRRLEREPKPSREYVDAID AFESYSRTHADEIAAYEEKRGKELSSAREAAAYMLAKAGLLNESIRRGNMLALADEHDWGALGDRIAEGDGAQQYSHALA GRYGLDPEQERILMEDTDAHLGEERDPGQAAREMDRRYRLAARLLGNID
Sequences:
>Translated_289_residues MVMDRNNRSHKPKGTPDGGRFETGDTGGASGDVAAPGMDPATCLTVRGFDDANRRMDGWYGRLAGLEKSGDDHDIRRIRG WSAAFDRWQRIHGDEVGAFVARRGDLISSDREAAAFMLARRDVLRKTYPEFGELDRRVDGEIRRLEREPKPSREYVDAID AFESYSRTHADEIAAYEEKRGKELSSAREAAAYMLAKAGLLNESIRRGNMLALADEHDWGALGDRIAEGDGAQQYSHALA GRYGLDPEQERILMEDTDAHLGEERDPGQAAREMDRRYRLAARLLGNID >Mature_289_residues MVMDRNNRSHKPKGTPDGGRFETGDTGGASGDVAAPGMDPATCLTVRGFDDANRRMDGWYGRLAGLEKSGDDHDIRRIRG WSAAFDRWQRIHGDEVGAFVARRGDLISSDREAAAFMLARRDVLRKTYPEFGELDRRVDGEIRRLEREPKPSREYVDAID AFESYSRTHADEIAAYEEKRGKELSSAREAAAYMLAKAGLLNESIRRGNMLALADEHDWGALGDRIAEGDGAQQYSHALA GRYGLDPEQERILMEDTDAHLGEERDPGQAAREMDRRYRLAARLLGNID
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32328; Mature: 32328
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVMDRNNRSHKPKGTPDGGRFETGDTGGASGDVAAPGMDPATCLTVRGFDDANRRMDGWY CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHH GRLAGLEKSGDDHDIRRIRGWSAAFDRWQRIHGDEVGAFVARRGDLISSDREAAAFMLAR HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHCCCHHHHHHHHHH RDVLRKTYPEFGELDRRVDGEIRRLEREPKPSREYVDAIDAFESYSRTHADEIAAYEEKR HHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GKELSSAREAAAYMLAKAGLLNESIRRGNMLALADEHDWGALGDRIAEGDGAQQYSHALA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCCHHHHHHHHH GRYGLDPEQERILMEDTDAHLGEERDPGQAAREMDRRYRLAARLLGNID CCCCCCHHHHEEEHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVMDRNNRSHKPKGTPDGGRFETGDTGGASGDVAAPGMDPATCLTVRGFDDANRRMDGWY CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHH GRLAGLEKSGDDHDIRRIRGWSAAFDRWQRIHGDEVGAFVARRGDLISSDREAAAFMLAR HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHCCCHHHHHHHHHH RDVLRKTYPEFGELDRRVDGEIRRLEREPKPSREYVDAIDAFESYSRTHADEIAAYEEKR HHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GKELSSAREAAAYMLAKAGLLNESIRRGNMLALADEHDWGALGDRIAEGDGAQQYSHALA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCCHHHHHHHHH GRYGLDPEQERILMEDTDAHLGEERDPGQAAREMDRRYRLAARLLGNID CCCCCCHHHHEEEHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA