| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692082
Identifier: 213692082
GI number: 213692082
Start: 1385862
End: 1386791
Strand: Direct
Name: 213692082
Synonym: Blon_1201
Alternate gene names: NA
Gene position: 1385862-1386791 (Clockwise)
Preceding gene: 213692078
Following gene: 213692083
Centisome position: 48.92
GC content: 68.17
Gene sequence:
>930_bases ATGCGGCGTGGCGATGGGGGAGGCCCGTTCCGGCGGTTGCTGTCCATGATCGCGACCATGGTCATGGTGGGCGTGCTCGT CGTCGTGCTCGTCTCCTCGGGAGGCTGGCGGACCGTGTCCGAGACGTTCGGCATCGGGAACCCGGACGCGTCCACGGCCG CATTGACCGAACCGAGGAAGGGGGATGCGGGACGCAACCCGGACGCCAAAAGCCTGTCGGGCCTGCTCTCCCTGTTCGGC GTCCATACGGGCGGGGAGGCGGACGCGGGGGCGAAGGACACGGGGAAAACCCCGGACACGGCCCCGACGGGGGATGCGGC CGCATGGCGGACCCAGTTGGACGCGGCCGGCCGGATAGGCACGGCGAACGCCAGGCCGGGCGGCTACGACCGTGAGACGC GGTTCGGCGGCTGGGCGCCGTCCGGCTGCGGGAAGGCGACCACGAGGGACACGATCCTCGCCCGCGACCTGACCGGCGTG AAAAAGGACTCCTCATGCCGGGTCGTGTCGGGCACGCTGCACGACCCGTACACGGGCGGGACCATCGGGTTCAGACGGGG CGTGAAGACGAGCGCCGACGTGCAGATCGACCACGTGGTGTCCCTGTACGACGCTTGGGCGTCCGGCGCCCGCGACTGGG ACCAGGCGAAACGCGTCGAATACGCGAACGATCCGGACGTGCTCCTCGCCTCGGACGGGCCGGCGAACATGGCGAAGGGG AGCGGCATCGACGTGAACGGACGATCCGAATACCTGACGCAGCATACGGGCGCACCCGACATCTGGATGCCGGACAACAA GGCGTACCGGTGCGACTACATGGCGAAAAGGGTGTCGATCAAGGCCAAGTACGGGCTGACGATGACCGCTCGAGAGAAAC AGCAGACCATCACCTACCTCGCGCAATGCGTGGCGGGCAAAAACCAGTAG
Upstream 100 bases:
>100_bases TGCTCGGCGTGCTCGGCCTGAACATGACCGGATTGACGCCCATGATCAACTGGCTGCTCGAACAGGTGCAGGCCCCCGTC TACATCCCGGAGGCGTGACC
Downstream 100 bases:
>100_bases CAAAGGAGATTCGACCATGGTCATGGACAGGAACAACAGGAGCCACAAGCCGAAGGGCACACCCGACGGCGGCAGATTCG AGACGGGGGACACGGGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Lipoprotein; Extracellular Deoxyribonuclease; S-Layer Domain-Containing Protein; Excalibur Domain-Containing Protein; 3-Oxoacyl-[Acyl-Carrier-Protein] Synthase III; S-Layer Domain Protein; Cation Transport ATPase; Excalibur Domain Protein; Conserved Membrane Protein
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MRRGDGGGPFRRLLSMIATMVMVGVLVVVLVSSGGWRTVSETFGIGNPDASTAALTEPRKGDAGRNPDAKSLSGLLSLFG VHTGGEADAGAKDTGKTPDTAPTGDAAAWRTQLDAAGRIGTANARPGGYDRETRFGGWAPSGCGKATTRDTILARDLTGV KKDSSCRVVSGTLHDPYTGGTIGFRRGVKTSADVQIDHVVSLYDAWASGARDWDQAKRVEYANDPDVLLASDGPANMAKG SGIDVNGRSEYLTQHTGAPDIWMPDNKAYRCDYMAKRVSIKAKYGLTMTAREKQQTITYLAQCVAGKNQ
Sequences:
>Translated_309_residues MRRGDGGGPFRRLLSMIATMVMVGVLVVVLVSSGGWRTVSETFGIGNPDASTAALTEPRKGDAGRNPDAKSLSGLLSLFG VHTGGEADAGAKDTGKTPDTAPTGDAAAWRTQLDAAGRIGTANARPGGYDRETRFGGWAPSGCGKATTRDTILARDLTGV KKDSSCRVVSGTLHDPYTGGTIGFRRGVKTSADVQIDHVVSLYDAWASGARDWDQAKRVEYANDPDVLLASDGPANMAKG SGIDVNGRSEYLTQHTGAPDIWMPDNKAYRCDYMAKRVSIKAKYGLTMTAREKQQTITYLAQCVAGKNQ >Mature_309_residues MRRGDGGGPFRRLLSMIATMVMVGVLVVVLVSSGGWRTVSETFGIGNPDASTAALTEPRKGDAGRNPDAKSLSGLLSLFG VHTGGEADAGAKDTGKTPDTAPTGDAAAWRTQLDAAGRIGTANARPGGYDRETRFGGWAPSGCGKATTRDTILARDLTGV KKDSSCRVVSGTLHDPYTGGTIGFRRGVKTSADVQIDHVVSLYDAWASGARDWDQAKRVEYANDPDVLLASDGPANMAKG SGIDVNGRSEYLTQHTGAPDIWMPDNKAYRCDYMAKRVSIKAKYGLTMTAREKQQTITYLAQCVAGKNQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32679; Mature: 32679
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRGDGGGPFRRLLSMIATMVMVGVLVVVLVSSGGWRTVSETFGIGNPDASTAALTEPRK CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHCCCCCCCCCCHHCCCCCC GDAGRNPDAKSLSGLLSLFGVHTGGEADAGAKDTGKTPDTAPTGDAAAWRTQLDAAGRIG CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC TANARPGGYDRETRFGGWAPSGCGKATTRDTILARDLTGVKKDSSCRVVSGTLHDPYTGG CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCC TIGFRRGVKTSADVQIDHVVSLYDAWASGARDWDQAKRVEYANDPDVLLASDGPANMAKG CHHHHCCCCCCCCEEHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCEEEECCCCCCCCCC SGIDVNGRSEYLTQHTGAPDIWMPDNKAYRCDYMAKRVSIKAKYGLTMTAREKQQTITYL CCCCCCCCHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHEEEEECCEEEEHHHHHHHHHHH AQCVAGKNQ HHHHHCCCC >Mature Secondary Structure MRRGDGGGPFRRLLSMIATMVMVGVLVVVLVSSGGWRTVSETFGIGNPDASTAALTEPRK CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHCCCCCCCCCCHHCCCCCC GDAGRNPDAKSLSGLLSLFGVHTGGEADAGAKDTGKTPDTAPTGDAAAWRTQLDAAGRIG CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC TANARPGGYDRETRFGGWAPSGCGKATTRDTILARDLTGVKKDSSCRVVSGTLHDPYTGG CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCC TIGFRRGVKTSADVQIDHVVSLYDAWASGARDWDQAKRVEYANDPDVLLASDGPANMAKG CHHHHCCCCCCCCEEHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCEEEECCCCCCCCCC SGIDVNGRSEYLTQHTGAPDIWMPDNKAYRCDYMAKRVSIKAKYGLTMTAREKQQTITYL CCCCCCCCHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHEEEEECCEEEEHHHHHHHHHHH AQCVAGKNQ HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA