| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is ecoRIM [H]
Identifier: 213692078
GI number: 213692078
Start: 1381364
End: 1382044
Strand: Direct
Name: ecoRIM [H]
Synonym: Blon_1197
Alternate gene names: 213692078
Gene position: 1381364-1382044 (Clockwise)
Preceding gene: 213692074
Following gene: 213692082
Centisome position: 48.76
GC content: 65.49
Gene sequence:
>681_bases ATGGCATGTCGACAACGACGGCCGCGGGGGGGGTATTCGATCGCGGACCTGGCCGCCCGCCCATTGGACGGCGACGGCTC CTTCGACTCGCCCGAATGCGAACACCTGCTCGACCGGCCCGGCGCGATCGTCGTCACCAACCCGCCGTTCAGCCACGCCA TCCGGTTCATGCGCATGCTCCGCCGGCATCCCGCGACCGACTACCTGATCGTCGCCAACCTGAACCTCACCACCGCCAAC GACGTATTCCCCATGATCAAGGAGGGACGCTGCCTCGTCGGCCTGAGCATCCACTCGGGCAGCATGTTCTTCCGACTGCC CGACGACCGACCGAAGACGGGAAGCATGATCCGGCCCGACGGCACGGTCGGCGTCAACAGCATCCGATGGCTCACCAGCC TCGCCGCCGCACGCGCCGACAAGACCTGGCCTCCCACGGGACACACGTACCGGGGACATGAGGACGAGTATCCGGAATAT GATGCCTACGACGCGATCAACGTGGACTCCATGCGCATGATGCCCGACGATCACGACGGGCCGATGGGCGTCCCGTTGAA CTTCCTCGAACATTGGGCGCCCGGCAACGGGTTCATGCTGCTCGACAACCTCGACGACCCGACGATCGACGGACGTCGCC TGTACAAGCGACTGCTCGTCAGACGGACGCGGGACGCATGA
Upstream 100 bases:
>100_bases CGCTCGACCACATGAACGAATACGGAATCGCGTCCCTCACCTGCACGAGCTTCCAACCCGACCATGGCACCCTGTTCGAC GACGGGACGCCCGCCATGCA
Downstream 100 bases:
>100_bases TCCACGCCGCCCGCGCATGCAGGCGGAACCCCGTGGGATAAACCGCCGTCCACGAACAGCGTGATACGAATCTTGTTGAA GGACGAACGGGACGCCGGCC
Product: adenine-specific methyltransferase EcoRI
Products: NA
Alternate protein names: M.EcoRI; Adenine-specific methyltransferase EcoRI [H]
Number of amino acids: Translated: 226; Mature: 225
Protein sequence:
>226_residues MACRQRRPRGGYSIADLAARPLDGDGSFDSPECEHLLDRPGAIVVTNPPFSHAIRFMRMLRRHPATDYLIVANLNLTTAN DVFPMIKEGRCLVGLSIHSGSMFFRLPDDRPKTGSMIRPDGTVGVNSIRWLTSLAAARADKTWPPTGHTYRGHEDEYPEY DAYDAINVDSMRMMPDDHDGPMGVPLNFLEHWAPGNGFMLLDNLDDPTIDGRRLYKRLLVRRTRDA
Sequences:
>Translated_226_residues MACRQRRPRGGYSIADLAARPLDGDGSFDSPECEHLLDRPGAIVVTNPPFSHAIRFMRMLRRHPATDYLIVANLNLTTAN DVFPMIKEGRCLVGLSIHSGSMFFRLPDDRPKTGSMIRPDGTVGVNSIRWLTSLAAARADKTWPPTGHTYRGHEDEYPEY DAYDAINVDSMRMMPDDHDGPMGVPLNFLEHWAPGNGFMLLDNLDDPTIDGRRLYKRLLVRRTRDA >Mature_225_residues ACRQRRPRGGYSIADLAARPLDGDGSFDSPECEHLLDRPGAIVVTNPPFSHAIRFMRMLRRHPATDYLIVANLNLTTAND VFPMIKEGRCLVGLSIHSGSMFFRLPDDRPKTGSMIRPDGTVGVNSIRWLTSLAAARADKTWPPTGHTYRGHEDEYPEYD AYDAINVDSMRMMPDDHDGPMGVPLNFLEHWAPGNGFMLLDNLDDPTIDGRRLYKRLLVRRTRDA
Specific function: This methylase recognizes the double-stranded sequence GAATTC, causes specific methylation on A-3 on both strands, and protects the DNA from cleavage by the EcoRI endonuclease [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002052 [H]
Pfam domain/function: NA
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 25464; Mature: 25333
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MACRQRRPRGGYSIADLAARPLDGDGSFDSPECEHLLDRPGAIVVTNPPFSHAIRFMRML CCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHCCCCEEEEECCCHHHHHHHHHHH RRHPATDYLIVANLNLTTANDVFPMIKEGRCLVGLSIHSGSMFFRLPDDRPKTGSMIRPD HHCCCCCEEEEEECCCCCCHHHHHHHHCCCEEEEEEEECCEEEEECCCCCCCCCCEECCC GTVGVNSIRWLTSLAAARADKTWPPTGHTYRGHEDEYPEYDAYDAINVDSMRMMPDDHDG CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCC PMGVPLNFLEHWAPGNGFMLLDNLDDPTIDGRRLYKRLLVRRTRDA CCCCCHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure ACRQRRPRGGYSIADLAARPLDGDGSFDSPECEHLLDRPGAIVVTNPPFSHAIRFMRML CCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHCCCCEEEEECCCHHHHHHHHHHH RRHPATDYLIVANLNLTTANDVFPMIKEGRCLVGLSIHSGSMFFRLPDDRPKTGSMIRPD HHCCCCCEEEEEECCCCCCHHHHHHHHCCCEEEEEEEECCEEEEECCCCCCCCCCEECCC GTVGVNSIRWLTSLAAARADKTWPPTGHTYRGHEDEYPEYDAYDAINVDSMRMMPDDHDG CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCC PMGVPLNFLEHWAPGNGFMLLDNLDDPTIDGRRLYKRLLVRRTRDA CCCCCHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 6257703; 6257701; 6257702 [H]