| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
Click here to switch to the map view.
The map label for this gene is 213692066
Identifier: 213692066
GI number: 213692066
Start: 1368382
End: 1370793
Strand: Reverse
Name: 213692066
Synonym: Blon_1184
Alternate gene names: NA
Gene position: 1370793-1368382 (Counterclockwise)
Preceding gene: 213692069
Following gene: 213692063
Centisome position: 48.39
GC content: 70.02
Gene sequence:
>2412_bases ATGGACAAACGAATCAGCAGGACCCTGGCCGCGACGCTCGCCGCCGCCACCCTGGCCGGCGGGACGGCCGCGCCCGCCAT GGCGGACCAGCCGACGGCGGGCGGGGCGGCGACCCGCACCGGACAGCGCACGCCCATCGCCGGCCTGGCCGGCGTGACGG CCCGGTGGAGGGACGCGAAAGGCGGCACCGGCGTCGTCACGGGATTCGATCCGGCCAACGGGAAGGGGGGCGACGTGCCC GCCGGCACGACCGCGGTCACCCTTGCCGGACTGCCCGACGGATGGACCCAATCCATCTCCAAGGACGATCCGCTGACCGT CACCCTCGACGCGCCCGATCCGAACCAGTCCCGCACCTACACGTTCCGCGCCGTGTCCGCCGCCGACCGGTTCAAGGAAT CATTGAAGAAGGCCGAAACGATCCGCGCCGACAAGGACGCGACGGCCGCGTACGACCAGGCGAGCCTCGACGCGCTCGAC AAGGCGATCGGCGACGCGAGGAAACTGGACGCCGGCACGGCCGGCGACCAGACGCTCGCCAATGCCGCCGACGGCCTCGA CCAGGCGGTCGCGGGCCTGCGCATCGTCAACTGGACGTTCCACGGCCGGACCCTCACCTACGACGACGCGTCGAGGACAT GGACGCCCGCCGCCCCGTTGGACCAGGCGCCCGGCACGGACGAGAAGATCACGGGCGGCAGCACGTCCAACCGGATCGAA GTGTCGACCACGGCCGCCGCACCCGACATCAGGAACACGCTGGCCGGCGTCACCGAAACGACCCGGGTCCTGACCGCGTC CCACGGCGGCGAATCGTTCCGCATCCCCATACGCATCGTCCAGGGCACGGAGATCACATTGAAGGACGGGACCCGTTTCA CCGGTTCGAAGAACGGCTCCGAATGGACCGTCACCGACACCGGCCACCGGCTCGACAGGGACAACATGCCCGTCACCGAC AAGGTGGAACTGTCCGACGGATCGACGCTCCCCGTCGCCTGGGGCAAGGCCACGCTCGACCCGTCGGGCGCGGCCGGCCC CGTATGGACCATGAGCGGGACGGCCACGCGCACGCTCGACAACGGGCAGACGCTCACGGTGAACCTGACCGCCAGCCGCG CCTGGAACGCGAAACTCAGCATCGGCGTGGAGCATCGGACCGCCGACGGGAACACGACCCCCATCCCCGGCGTCGACCTG GAGGACGCGACCGCCGCGGACACCCCGTTGGACGTGACCCTGCCCACGCTCCCCCACGCCGCGGCCGGCGACCAGTACAC GCCCGCCGTGACCAGCGGCGACGACGCGACGGTCACGTTGAAACCCACCGGGCTCGGCGATAACGGGATGCGCGTGTTCA CCGGCACGATCAGGGCGACCAGGACGGACGGCACCATCGTGACCCGCGAATTCACGATCCGGCAGCCGTTCGAACAGCCG TCCAGAACCGTCGACGCGCCGGACGCCGCCCTCGACGGACTGCTCGTCAACGGCAAGCCCATCCAAGGGTGGGATCCCGA CATCCTCGAATACACGATCACCGCGGGCGAGGACGACAAGGTCACGGTCAGCCCCAGGGCGAAGGCCGGACAGACGGTGA AGGCGTCCGACACGACCCTGACCGCGCACAGCACCGTCCAGCATTGGACGGTGACCGGCCCGGACGGCGGGAACCGTACG TACACGGTCACGCTCGTCCGCGACCACAGGACCCCCACCGCGGACGAGGCGTTCAAACCCTCCGATCCGAAGGACACGGG CGGCACCCGGGAGGCTCCCGGCCCGGACACGGCCACGCTGAAAAGCGTCGGATGGACGAAGGACGGCACGTACCACGCGG AGAAGGGCGACGAATACCTGATCCCGGAGGGCGGCTCGTTCGCCTACGAGTCATACCTGGGCCAGATCGTGAAGATCACG CCGGGCCGCGACCACGGCATGACGTGGAAATACCGGATCGGGGTGCTCGCCCCCGACGGCGTCACCTACCGGACGCGCAC CGTCACGGTCACCTACCTGACCGGGGCGACCCACAGGGCGGGCCTGACCGGGCTGAGCGTCGACGGGCGCGACGTCGCCG GGTTCTCGCCGGACAGGCTCGAATACACGGTGGGCGTCGCCAACCCGGAACGCTACGTGGTCACCCCGTCGTGGGACAAG CAGACGGGCATGAGCGTCACCAAGCATGTGGACGGCGCGGACACGACACTCACCGTGACCAGCGCCGACGGGCTGACGTC CGTCGTCTACAAGGTACACGTCGAATACGATGCGGGGCTCGCCGCCACCGGCGCGGGCGTGACGGGCGTGATCATGATCG CCGTCGCCGCCGTCCTGGCGGCCGTCGGCGCATGGTTCGCGTCCCGGCATAAGCCGCATGATCCGGACGGGGACACGGAC GCGACCATGTGA
Upstream 100 bases:
>100_bases TCCATGCCCCATCGTATGCGTTGCGCAGTCGCGCATAGACGCATGCCGACGCGTGCGGGGCCGGTTCCAGGCCCGCACGA CGATTCGGAAAAGGAGAACC
Downstream 100 bases:
>100_bases TCCGGATGCCCATGCACGCGGGAAGGCCGGATGCGGGGGGCGTGTGTTCTCCCCGCATCCGGCCTTCCCGCGTGCATGGG GAAAACCGGCCTAGGCGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 803; Mature: 803
Protein sequence:
>803_residues MDKRISRTLAATLAAATLAGGTAAPAMADQPTAGGAATRTGQRTPIAGLAGVTARWRDAKGGTGVVTGFDPANGKGGDVP AGTTAVTLAGLPDGWTQSISKDDPLTVTLDAPDPNQSRTYTFRAVSAADRFKESLKKAETIRADKDATAAYDQASLDALD KAIGDARKLDAGTAGDQTLANAADGLDQAVAGLRIVNWTFHGRTLTYDDASRTWTPAAPLDQAPGTDEKITGGSTSNRIE VSTTAAAPDIRNTLAGVTETTRVLTASHGGESFRIPIRIVQGTEITLKDGTRFTGSKNGSEWTVTDTGHRLDRDNMPVTD KVELSDGSTLPVAWGKATLDPSGAAGPVWTMSGTATRTLDNGQTLTVNLTASRAWNAKLSIGVEHRTADGNTTPIPGVDL EDATAADTPLDVTLPTLPHAAAGDQYTPAVTSGDDATVTLKPTGLGDNGMRVFTGTIRATRTDGTIVTREFTIRQPFEQP SRTVDAPDAALDGLLVNGKPIQGWDPDILEYTITAGEDDKVTVSPRAKAGQTVKASDTTLTAHSTVQHWTVTGPDGGNRT YTVTLVRDHRTPTADEAFKPSDPKDTGGTREAPGPDTATLKSVGWTKDGTYHAEKGDEYLIPEGGSFAYESYLGQIVKIT PGRDHGMTWKYRIGVLAPDGVTYRTRTVTVTYLTGATHRAGLTGLSVDGRDVAGFSPDRLEYTVGVANPERYVVTPSWDK QTGMSVTKHVDGADTTLTVTSADGLTSVVYKVHVEYDAGLAATGAGVTGVIMIAVAAVLAAVGAWFASRHKPHDPDGDTD ATM
Sequences:
>Translated_803_residues MDKRISRTLAATLAAATLAGGTAAPAMADQPTAGGAATRTGQRTPIAGLAGVTARWRDAKGGTGVVTGFDPANGKGGDVP AGTTAVTLAGLPDGWTQSISKDDPLTVTLDAPDPNQSRTYTFRAVSAADRFKESLKKAETIRADKDATAAYDQASLDALD KAIGDARKLDAGTAGDQTLANAADGLDQAVAGLRIVNWTFHGRTLTYDDASRTWTPAAPLDQAPGTDEKITGGSTSNRIE VSTTAAAPDIRNTLAGVTETTRVLTASHGGESFRIPIRIVQGTEITLKDGTRFTGSKNGSEWTVTDTGHRLDRDNMPVTD KVELSDGSTLPVAWGKATLDPSGAAGPVWTMSGTATRTLDNGQTLTVNLTASRAWNAKLSIGVEHRTADGNTTPIPGVDL EDATAADTPLDVTLPTLPHAAAGDQYTPAVTSGDDATVTLKPTGLGDNGMRVFTGTIRATRTDGTIVTREFTIRQPFEQP SRTVDAPDAALDGLLVNGKPIQGWDPDILEYTITAGEDDKVTVSPRAKAGQTVKASDTTLTAHSTVQHWTVTGPDGGNRT YTVTLVRDHRTPTADEAFKPSDPKDTGGTREAPGPDTATLKSVGWTKDGTYHAEKGDEYLIPEGGSFAYESYLGQIVKIT PGRDHGMTWKYRIGVLAPDGVTYRTRTVTVTYLTGATHRAGLTGLSVDGRDVAGFSPDRLEYTVGVANPERYVVTPSWDK QTGMSVTKHVDGADTTLTVTSADGLTSVVYKVHVEYDAGLAATGAGVTGVIMIAVAAVLAAVGAWFASRHKPHDPDGDTD ATM >Mature_803_residues MDKRISRTLAATLAAATLAGGTAAPAMADQPTAGGAATRTGQRTPIAGLAGVTARWRDAKGGTGVVTGFDPANGKGGDVP AGTTAVTLAGLPDGWTQSISKDDPLTVTLDAPDPNQSRTYTFRAVSAADRFKESLKKAETIRADKDATAAYDQASLDALD KAIGDARKLDAGTAGDQTLANAADGLDQAVAGLRIVNWTFHGRTLTYDDASRTWTPAAPLDQAPGTDEKITGGSTSNRIE VSTTAAAPDIRNTLAGVTETTRVLTASHGGESFRIPIRIVQGTEITLKDGTRFTGSKNGSEWTVTDTGHRLDRDNMPVTD KVELSDGSTLPVAWGKATLDPSGAAGPVWTMSGTATRTLDNGQTLTVNLTASRAWNAKLSIGVEHRTADGNTTPIPGVDL EDATAADTPLDVTLPTLPHAAAGDQYTPAVTSGDDATVTLKPTGLGDNGMRVFTGTIRATRTDGTIVTREFTIRQPFEQP SRTVDAPDAALDGLLVNGKPIQGWDPDILEYTITAGEDDKVTVSPRAKAGQTVKASDTTLTAHSTVQHWTVTGPDGGNRT YTVTLVRDHRTPTADEAFKPSDPKDTGGTREAPGPDTATLKSVGWTKDGTYHAEKGDEYLIPEGGSFAYESYLGQIVKIT PGRDHGMTWKYRIGVLAPDGVTYRTRTVTVTYLTGATHRAGLTGLSVDGRDVAGFSPDRLEYTVGVANPERYVVTPSWDK QTGMSVTKHVDGADTTLTVTSADGLTSVVYKVHVEYDAGLAATGAGVTGVIMIAVAAVLAAVGAWFASRHKPHDPDGDTD ATM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83925; Mature: 83925
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKRISRTLAATLAAATLAGGTAAPAMADQPTAGGAATRTGQRTPIAGLAGVTARWRDAK CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCEEEEECCC GGTGVVTGFDPANGKGGDVPAGTTAVTLAGLPDGWTQSISKDDPLTVTLDAPDPNQSRTY CCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCEEEEECCCCCCCCCEE TFRAVSAADRFKESLKKAETIRADKDATAAYDQASLDALDKAIGDARKLDAGTAGDQTLA EEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHCHHHHHHHHHHHCCHHHCCCCCCCCHHHH NAADGLDQAVAGLRIVNWTFHGRTLTYDDASRTWTPAAPLDQAPGTDEKITGGSTSNRIE HHHCCHHHHHHCEEEEEEEECCCEEEECCCCCEECCCCCCCCCCCCCCEECCCCCCCEEE VSTTAAAPDIRNTLAGVTETTRVLTASHGGESFRIPIRIVQGTEITLKDGTRFTGSKNGS EEEECCCCHHHHHHHCCCCCEEEEEECCCCCEEEEEEEEEECCEEEECCCCEECCCCCCC EWTVTDTGHRLDRDNMPVTDKVELSDGSTLPVAWGKATLDPSGAAGPVWTMSGTATRTLD EEEEECCCCCCCCCCCCCCEEEEECCCCCCEEECCCEECCCCCCCCCEEEECCCEEEEEC NGQTLTVNLTASRAWNAKLSIGVEHRTADGNTTPIPGVDLEDATAADTPLDVTLPTLPHA CCCEEEEEEEECCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCC AAGDQYTPAVTSGDDATVTLKPTGLGDNGMRVFTGTIRATRTDGTIVTREFTIRQPFEQP CCCCCCCCCEECCCCCEEEEEECCCCCCCCEEEEEEEEEEECCCEEEEEEEEECCCCCCC SRTVDAPDAALDGLLVNGKPIQGWDPDILEYTITAGEDDKVTVSPRAKAGQTVKASDTTL CCCCCCCCHHHCCEEECCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCEEECCCCEE TAHSTVQHWTVTGPDGGNRTYTVTLVRDHRTPTADEAFKPSDPKDTGGTREAPGPDTATL EECCCEEEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE KSVGWTKDGTYHAEKGDEYLIPEGGSFAYESYLGQIVKITPGRDHGMTWKYRIGVLAPDG HHCCCCCCCCEECCCCCEEECCCCCCCHHHHHCCEEEEECCCCCCCCEEEEEEEEECCCC VTYRTRTVTVTYLTGATHRAGLTGLSVDGRDVAGFSPDRLEYTVGVANPERYVVTPSWDK CEEEEEEEEEEEEECCCCCCCCEEECCCCCCCCCCCCCCEEEEEEECCCCEEEECCCCCC QTGMSVTKHVDGADTTLTVTSADGLTSVVYKVHVEYDAGLAATGAGVTGVIMIAVAAVLA CCCCEEEEECCCCCCEEEEEECCCCEEEEEEEEEEECCCEEECCCCHHHHHHHHHHHHHH AVGAWFASRHKPHDPDGDTDATM HHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MDKRISRTLAATLAAATLAGGTAAPAMADQPTAGGAATRTGQRTPIAGLAGVTARWRDAK CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCEEEEECCC GGTGVVTGFDPANGKGGDVPAGTTAVTLAGLPDGWTQSISKDDPLTVTLDAPDPNQSRTY CCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCEEEEECCCCCCCCCEE TFRAVSAADRFKESLKKAETIRADKDATAAYDQASLDALDKAIGDARKLDAGTAGDQTLA EEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHCHHHHHHHHHHHCCHHHCCCCCCCCHHHH NAADGLDQAVAGLRIVNWTFHGRTLTYDDASRTWTPAAPLDQAPGTDEKITGGSTSNRIE HHHCCHHHHHHCEEEEEEEECCCEEEECCCCCEECCCCCCCCCCCCCCEECCCCCCCEEE VSTTAAAPDIRNTLAGVTETTRVLTASHGGESFRIPIRIVQGTEITLKDGTRFTGSKNGS EEEECCCCHHHHHHHCCCCCEEEEEECCCCCEEEEEEEEEECCEEEECCCCEECCCCCCC EWTVTDTGHRLDRDNMPVTDKVELSDGSTLPVAWGKATLDPSGAAGPVWTMSGTATRTLD EEEEECCCCCCCCCCCCCCEEEEECCCCCCEEECCCEECCCCCCCCCEEEECCCEEEEEC NGQTLTVNLTASRAWNAKLSIGVEHRTADGNTTPIPGVDLEDATAADTPLDVTLPTLPHA CCCEEEEEEEECCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCC AAGDQYTPAVTSGDDATVTLKPTGLGDNGMRVFTGTIRATRTDGTIVTREFTIRQPFEQP CCCCCCCCCEECCCCCEEEEEECCCCCCCCEEEEEEEEEEECCCEEEEEEEEECCCCCCC SRTVDAPDAALDGLLVNGKPIQGWDPDILEYTITAGEDDKVTVSPRAKAGQTVKASDTTL CCCCCCCCHHHCCEEECCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCEEECCCCEE TAHSTVQHWTVTGPDGGNRTYTVTLVRDHRTPTADEAFKPSDPKDTGGTREAPGPDTATL EECCCEEEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE KSVGWTKDGTYHAEKGDEYLIPEGGSFAYESYLGQIVKITPGRDHGMTWKYRIGVLAPDG HHCCCCCCCCEECCCCCEEECCCCCCCHHHHHCCEEEEECCCCCCCCEEEEEEEEECCCC VTYRTRTVTVTYLTGATHRAGLTGLSVDGRDVAGFSPDRLEYTVGVANPERYVVTPSWDK CEEEEEEEEEEEEECCCCCCCCEEECCCCCCCCCCCCCCEEEEEEECCCCEEEECCCCCC QTGMSVTKHVDGADTTLTVTSADGLTSVVYKVHVEYDAGLAATGAGVTGVIMIAVAAVLA CCCCEEEEECCCCCCEEEEEECCCCEEEEEEEEEEECCCEEECCCCHHHHHHHHHHHHHH AVGAWFASRHKPHDPDGDTDATM HHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA